>S51485/1-328 hybridoma antibody H chain variable region=influenza virus A/PR/8/34 hemagglutinin-specific [mice, BALB/c, Genomic, 328 nt]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------C---------------------- ------------------------------------------------------------------------ --------------------------------------------CT-G----------------GCCTCGTG AAACC---------TTC-TC-AGTC----------------TCTGTCTCTCACCTGCTCTGTCA----CTGG CTACTCCATCA------CCAGT----GGTT-------------------------ATTACTGGA---ACTGG ATC----CG-GCA------GTTTCCAGGAAACAAA---CTGGAATGGATGGGCTACA-----TAAGCTACGA CGGTAGCAATAACTACAACCCATCTCT----CAAAA-ATCGAATCTC-C----ATCACTCGTGACACATCTA AGAACCAGTTT---------------------------------TTCCTGAAGTTGAATTCTGTGACTA--C TGAGGACA----------------------------------------CAGCTAC----------------- --------ATATTACTGTGCAAG-----AGGCCCCCCTATACCATACTTTGACTACTGG------------- -------------------------GGCCAAGGCACCACTCTCACAGTCTCC---T---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00782264/1-284 conserved hypothetical protein [Streptococcus agalactiae H36B]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------TLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LVTDE-N--KDF--YFI------------------------QKDGFTFALSKS------EGEH-----HIGE MVKGFAYTDIQ---------------QKAR----LTTKET----FATRDHYGWGTVTEVRKDLG-VFLDTGL PDK-------QVV-VSLD-----VLPEL----------KELWPKKGDRL-YVCLDVD-----KKDR---LWA LPA--DPEVFQQMATPAYNNMQNQNWP----AIVYR-LKLSGTFVYLPE----NNMLGFIHPSE----RYSE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMILTYLESNGGFMTLNDKSS-----P EEIKATFGISKG--QFKKA---------LGGLMKAKKIKQD-------QLGTELL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_688505/1-284 hypothetical protein SAG1511 [Streptococcus agalactiae 2603V/R]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------TLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LVTDE-N--KDF--YFI------------------------QKDGFTFALSKS------EGEH-----HIGE MVKGFAYTDMQ---------------QKAR----LTTKET----FATRDHYGWGTVTEVRKDLG-VFLDTGL PDK-------QVV-VSLD-----VLPEL----------KELWPKKGDRL-YVCLDVD-----KKDR---LWA LPA--DPEVFQRMATPAYNNMQNQNWP----AIVYR-LKLSGTFVYL-PE---NNMLGFIHPSE----RYSE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMILTYLESNGGFMTLNDKS-----SP EEIKATFGISKG--QFKKA---------LGGLMKAKKIKQD-------QLGTELL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_268757/1-285 hypothetical protein SPy0464 [Streptococcus pyogenes M1 GAS]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------HKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIE---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHSSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKS-----SP EEIKASFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_059724/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS10394]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----MLPEM----------KELWPKKGDKLYIR-LEVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYL-PE---NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKAAFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_601874/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS10750]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QVGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEIRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYL-PE---NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKAIFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_596113/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS9429]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKL-YISLDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_279836/1-285 s1 RNA binding domain [Streptococcus pyogenes MGAS6180]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------M----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKS-----SP EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_597991/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS10270]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LEVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_606726/1-285 hypothetical protein spyM18_0507 [Streptococcus pyogenes MGAS8232]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKAIFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_802791/1-285 hypothetical protein SPs1529 [Streptococcus pyogenes SSI-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKS-----SP EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01179377/1-284 RNA binding S1 [Bacillus cereus subsp. cytotoxis NVH 391-98]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------FK-- ------------------------------------------------------------------------ -----------------------------------------------P----------------G--SIEQV TVLRQ-T--EIG--YMV-----GHD----------------EEEVF-LHKNEV------AGDI-----EEGD TIDVFFYLDHQ--------ERI----AATM------KTPL-------ITTSDWNWVKVV--------EVKER L---------GVF-VDIGVSKDILVPADEFPIY-----TPVWPEVGDEL-YCTLKLT-----KRGR-LIALP ARDADMQEIVVEATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTER------- -KEQVRIGQRV-TGRIIDV-KEDGTINISLLPRKEE--GIEDD-ATVIYEYMESRGGAMPFWDKSY-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EGKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01183194/1-284 RNA binding S1 [Bacillus weihenstephanensis KBAB4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------L----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEL------AGEI-----AEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTHDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPLDEFPIY-----MPVWPQEGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIIVDATPSMRN----KNVN----GRVYR-SLQVGSFILT-D----EHFRAFLHHTER------- -KEQVRIGERV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVLYAYMEERGGAMPFWDKSN-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKIY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_830946/1-282 S1 RNA binding domain [Bacillus cereus ATCC 14579]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MQI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVDATPSMRN----KNVN----GRVYR-SLQVGSFILT-D----EHFRAFLHHTER------- -KEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSH-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00741116/1-284 S1 RNA binding domain [Bacillus thuringiensis serovar israelensis ATCC 35646]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIIVDATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTER------- -KEQVRIGERV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSH-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_977595/1-284 hypothetical protein BCE_1274 [Bacillus cereus ATCC 10987]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVDATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTER------- -KEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSY-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00391498/1-284 COG2996: Uncharacterized protein conserved in bacteria [Bacillus anthracis str. A2012]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVEATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTE-------- RKEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSY-----P EDIKERFNMSKA--AFKRA---------LGKLMX--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_843646/1-284 hypothetical protein BA1167 [Bacillus anthracis str. Ames]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRETE--IGY---MV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVEATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTE-------- RKEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKS-----YP EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_090796/1-282 YitL [Bacillus licheniformis ATCC 14580]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------MK-P----------------G--QQLTL KIDHKAD--YGY--FLT-D---G------------------ETAVL-LHQSEI------TEDI-----DGRE EVDVFLYVDHE--------DRL----AATMRKPIISAEQY-----------GWVEVVD-------------- -----AVSGMGVF-VDVGLSKDALVATEHLPPY-----ESVWPQKGDRL-YCMLKIT------GHG------ -RMFAKPAPEDKISELFTEASPGLMNK-ELTGTIYR-LIASGSFMIS-E----AGIRGFIHSSE----RKEE P----RLGEKL-TARVIKV-KEDGSVNLSLLPRKQD--ALSVD-AEQILTYMRSRNGAMPFWDKS-----DP EDIRERFNMSKA--AFKRA---------LGHLMKQDKIY-----------------------QEEGW----- ------------------------------------------------------------------------ --------------------TY-------------------------------------------------- ----------------------------------------------------------EKK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >CAA70667/1-282 YitL [Bacillus subtilis]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------MR-P----------------G--QQLTL SIDHQTD--FGY--FLT-D---G------------------EDTIL-LHNSEM------TEDI-----EDRD EVEVFIYVDQQ--------ERL----AATMKIPIISADEY-----------GWVEVVDKVEDM--------- ----------GVF-VDVGLSKDALVATEHLPPY-----EDVWPQKGDKL-YCMLKVT-----NRGRMFAKPA PEDIISELFTDASEDLMNK-----ELT----GTVYR-LIASGSFVIT-D----DGIRCFIHPSE----RKEE P----RLGSRV-TGRVIQV-KEDGSVNLSLLPRKQD--AMSVD-AECILTYMRMRNGAMPYSDKS-----QP DDIRERFNMSKA--AFKRALGH---LMKNGKVY-----------------------------QENGW----- ------------------------------------------------------------------------ --------------------TY-------------------------------------------------- ----------------------------------------------------------EKK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_388984/1-298 hypothetical protein BSU11030 [Bacillus subtilis subsp. subtilis str. 168]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MLTKSAENKRNRK-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------------DDS------ ------------------------------------------------------------------------ --------------------------------------------MR-P----------------G--QQLTL SIDHQTD--FGY--FLT-D---G------------------EDTIL-LHNSEM------TEDI-----EDRD EVEVFIYVDQQ--------ERL----AATMKIPIISADEY-----------GWVEVVDKVEDM--------- ----------GVF-VDVGLSKDALVATEHLPPY-----EDVWPQKGDKL-YCMLKVT-----NRGRMFAKPA PEDIISELFTDASEDLMNK-----ELT----GTVYR-LIASGSFVIT-D----DGIRCFIHPSE----RKEE P----RLGSRV-TGRVIQV-KEDGSVNLSLLPRKQD--AMSVD-AECILTYMRMRNGAMPYSDKS-----QP DDIRERFNMSKA--AFKRALGH---LMKNGKVY-----------------------------QENGW----- ------------------------------------------------------------------------ --------------------TY-------------------------------------------------- ----------------------------------------------------------EKK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_694208/1-282 hypothetical protein ABO_2488 [Alcanivorax borkumensis SK2]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------TVT------------ ------------------------------------------------------------------------ --------------------------------------------PK-L----------------G--TRHSL EILKV-I--RNG--LLL-DG--GEL-----------------GEVL-LPSREV-------ENQS--L-APGD SVMVTLY---S--------DGE----ARPM----ASLRTP-------RIQLGQVALLKVVSTSK----IGAF VDW-------GMP-KDL------LLPFA----------EQKGPVREESWVLVMLTTD------REG------ -RLMVSAQLDRFLSDTCQAYQQGDEVS----LVAAH-STDLGYKVVV-D----DHAWGMIAASEL------- -RAPLRPGQRV-TGYVQRL-REDQKLSLSLNAPGAA--KSDGL-TEQILAALENAGGELPLGDKSS-----P EVIFQTFRCSKN--AFKQA---------IGGLYKARRIVIEKERIFF------------------------- --PEGE------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01635902/1-280 hypothetical protein CdifQ_03001110 [Clostridium difficile QCD-32g58]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------MINIGDF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------KLT--------VK-- ------------------------------------------------------------------------ --------------------------------------------RKTE-------------F--G--YFLDG QTNNT----KDD--ILLHNR----L----------------------IGKNEI---------------NIGD EVNAFIFKDSD--------DRT----AATL------IPPL-------AKVGDVAHLKVVDNTDI-------- ----------GTF-IDMGLPKDILVPFK----------AKTYPLFRDEKYLFYIYLD-----KSKR------ ---IAATTDIDSYLLTDHTYNVGDIVT----GVVYGFQTNNSAMICV-D----NKYAGVILHNEY------- -FTELKAGDVLENLHVIKIYE-DGKLGLSPRGNRKD--ELDTL-ENKILSYLEGSDGYMRFNDKSD-----P KDISILFNSSKK--NFKRA---------LGVLMKKGLIYQDEEGTYL-K----------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00911695/1-278 RNA binding S1 [Clostridium beijerincki NCIMB 8052]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MIS------------ ------------------------------------------------------------------------ -----------------------------------------------V----------------G--QYSKL KVSKKVD--FGY--YLE-DN----F----------------GDEVL-LPNSAA------KGHEI----KEGD QLEVFIYRDSK--------DRM----ISTL------KKPL-------LTVGEIGYLEVVSQNNI-------- ----------GAF-VNFGLERDLFVPLKE---------QSYKLKEGKKYLFYMYV-------DKTD-RLAAT TRIHSYLDIAEE-----GKYKVSDEVN----AIVYE-INENATLNVAID----GEYRGLILANE-------- HFEYIYPGQEI-KGRVKRI-YEDGTIGVTTRKKRLE--ARSEL-SETILNYLKANGGFMPYNDKS-----SP DDIKREFNTSKN--YFK---------MTLGGLMREKLITQDKEGTRL------------------------- ----------------------------L------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_562566/1-280 hypothetical protein CPE1650 [Clostridium perfringens str. 13]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------IN-I----------------G--QFNKM KVVRE----ADFG-YYL-DR--GTRN---------------TSDDILIPTGNL------DGREI----KVGD EVEAFIY-------------------------------RD-------SRDRLIATLKKPLAVVG---DVALL EVK--SITKIGAF-VDFGLERDILVPLK----------EQKYKMEEGKKYLVYIYVD-----KTGR------ ---LAATTEVDKYLDEIEEPKMGTEVS----GIVYG-YQTNGSLRVAVD----NKHRAVVLKNEY------- -FTNIKPGDNI-KGKIIKV-YEDGIVGLSLRNHKLK--ERNEL-GDTILNYLKENGGVMSLNDKST-----P DEIRNTFKTSKN--YFKMA---------LGGLMKKGLIEQDEFGTRL------------------------- ------------------------------------------------------------------------ ------------------K----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_696335/1-280 hypothetical protein CPF_1902 [Clostridium perfringens ATCC 13124]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------IN-I----------------G--QFNKM KVVRE----ADFG-YYL-DR--GTRN---------------TSDDILIPTGNL------DGREI----KVGD EVEAFIY-------------------------------RD-------SRDRLIATLKKPLAVVG---DVALL EVK--SITKIGAF-VDFGLERDILVPLK----------EQKYKMEEGKKYLVYIYVD-----KTGR------ ---LAATTEVDKYLDEIEEPKMGTEVS----GIVYG-YQTNGSLRVAIN----NKHRAVVLKNEY------- -FTNIKPGDNI-KGKIIKV-YEDGIVGLSLRNHKLK--ERNEL-GDTILNYLKENGGVMSLNDKST-----P DEIRNTFKTSKN--YFKMA---------LGGLMKKGLIEQDEFGTRL------------------------- ------------------------------------------------------------------------ ------------------K----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_698937/1-280 hypothetical protein CPR_1621 [Clostridium perfringens SM101]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------IN-I----------------G--QFNKM KVVRE----ADFG-YYL-DR--GTRN---------------TSDDILIPTGNL------DGREI----KVGD EVEAFIY-------------------------------RD-------SRDRLIATLKKPLAVAG---DVALL EVK--SITKIGAF-VDFGLERDILVPLK----------EQKYKMEEGKKYLVYIYVD-----KTGR------ ---LAATTEVDKYLDEIEEPKMGTEVS----GIVYG-YQTNGSLRVAID----NKHRAVVLKNEY------- -FTNIKPGDNI-KGKIIKV-YEDGIVGLSLRNHKLK--ERNEL-GDTILNYLKENGGVMSLNDKS-----TP DEIRNTFKTSKN--YFK---------MALGGLMKKGLIEQDEFGTRL------------------------- ------------------------------------------------------------------------ ------------------K----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_781323/1-301 S1 RNA binding domain [Clostridium tetani E88]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MF----------------- ------------------------------------------------------------------------ -------------------------------------------------VYYDIINIKLN---EKYGGNN-- ------------------------------------------------------------------------ --------------------------------------------LEHL----------------G--KYEEF TIVRN-G--APG--YYL-DMKTG-N----------------TSDDVLLPHSDV------EGKEL----KIGD KVKVFIYKDSK--------NRP----IATI------KEPL-------AEVGDIAYLE----------VVDNT PMG-------SF--INIGVPKDILIPMAE---------KKYPLIVGKKYLFYIY-ID-----KSER------ ---IAATTDIESYLEMAEGYKIGDEVD----GIIYD-IYDNNSVAVAVE----GKYRAVMLKNEYYVK---- ----VNPGDKL-KFKVKRI-YEDGNLGLTIRITGKE--QRDKL-QEDILEYLKENNGFMPLNDYSS-----P EDIKNVFKESKN--YFKRS---------LGGLMKKGLIEQTKEGTKL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------IQK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_348262/1-282 Predicted nucleic acid binding protein, containing 2 S1 domains, YITL B.subtilis ortholog [Clostridium acetobutylicum ATCC 824]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------VK-I----------------G--EYNEL KVARK----SDFGLFLDAET--G-S----------------TSDDILLPMKDV---------EEDTI-EIGS TIKVFIYRDSK--------DRP------IA----TTREPY-------AKVGDTAYLK----------VVSNT KIG-------AF--LDFGLERDLFVPIKE---------QSYLLEPGKKYLFYV-YLD------KTG-RLAAT TYI----------DKILEVLEDEDLLKNELSGTVYG-FQSNGTIMVA-IE---NKYQGVILKNECFIK---- ----VSQGDVL-NNLRFKRKFEDGRIGLTTRKYPKD--ERVEL-EHKIYEYLKKNNGFMPYNDKSS-----P EDIKRVFHESKN--YFKNA---------LGGLMKKGLISQDKDGTKL------------------------- ------------------------------------------------------------------------ -----------------IK----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01355107/1-279 RNA binding S1 [Clostridium phytofermentans ISDg]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QL------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KIQTL TVAKT----TDFGVYLA-DNDNS-R----------------KEDTILLPKNQV-----AAGT------KIGD QLSVFVYKDSE--------DRP------------IATQTT-------PKLTLKEIAVLKVKEVT---TIGAF LDW-------GIA-KDL------FLPFK----------EQTHPVIADEEVLVSLYID-----KSKRLCATMK IYDMLQTDSPYGKDDKVT-------------GIVYEIIPAFGAFVAV-D----NKYSALIPNKEL------- -HTKLNPGETV-TARVTMVQAD-GKLDLSLREKTYL--QLDSD-AEIIYEKLTAAGGFLPFHDKSE-----P DAIKKEFNLSKN--AFKRA---------IGRLMKDNKIKILEDGIQI------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_878684/1-278 S1 RNA binding domain [Clostridium novyi NT]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IE-I----------------G--KIQTL KVSNI-A--KIG--AYL-DAGTG-E----------------QNDNILLPNNQL----------PESI-EEGD EVEVFVYRDSE--------DRL------------IATRKT-----------------PLVQAGE---LAILE VKD--TTRI-GAF-LDIGLERDVLLPFKEQKYKVL---PGKKYLVG-------LYID-----KSGR----LT ATTYVSKFLSSD-----SPYKKGEWVK----GTIYSINKEIGALVAV-D----NKYKGLIPRSEV------- -YKELKVGDSV-ECRIIRV-RDDGKLDLGTREVAYK--QMDSD-SEMILEKLKKYDGFMSLNDKS-----NP EEIKDRLKISKA--AFKRAV---GRLLKEGKIVQT-------------EKGIKLK----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_603939/1-281 S1 RNA binding domain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MIK--------VG-- ------------------------------------------------------------------------ --------------------------------------------KR------------------Q--KLVIN NFSSV----GAY--LFA-GT-DD------------------DKDNILLPNNEL------EGKDL----KEGD EVEVLIYRDSE--------DRL------IA----TFRKTE-------ALVGTLAKLEVVDDNPK----LGAF LDW-------GLN-------KDLMLPNSQ---------KETKVEIGKKYLVGLYEDS-----KGRV-SATMK IYKFLMPSN---------DIKKGDIVN----ATVYRINDEIGVFVAV-E----DRYFGLIPKSEC------- -FEKYSVGDEL-TLRVTRVRE-DKKLDLSPRKLLSQ--QIETD-AELVLGKMKLLKEHFRFNDESS-----A EDIKDYFGISKK--AFKRA---------IGSLLKNGLIEKNGDYFIL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------------KK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00144280/1-285 S1 RNA binding domain [Fusobacterium nucleatum subsp. vincentii ATCC 49256]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------EKM------------ ------------------------------------------------------------------------ --------------------------------------------IK-V----------------G--KRQKL VINNF-SSVGAY--LFA-GTDDD------------------KDNIL-LPNNEI------EGKDL----KEGD EVEVLIYRDSE---------------DRLI----ATFRKT-------EALVGTLAKLEVVDDNP---RLGAF LDW-------GLN-KDL------MLPNSQ---------KETKIEIGKKYLVGLYEDS-----KGRV-SATMK IYKFLMPSN---------DIKKGDIVN----ATVYRVNDEIGTFVAV-E----DRYFGLIPKSEC------- -FEKYSVGDEL-TLRVTRV-REDKKLDLSPRKLLSE--QMESD-AELVLGKMKLLKEHFRFNDESS-----A EDIKDYFGISKK--AFKRA---------IGSLLKKGLIEKSGEYFIL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------------KK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01121323/1-276 hypothetical protein RB2501_15729 [Robiginitalea biformata HTCC2501]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------MIEL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--NYNTL TIKRS-T--RVG--LFL-GD--D-D----------------VDDLL-LPNKYV-----PDDF------EIGQ ELRVFCYLDHE--------ERP------IA----TTLEPL-------VTRNTFGYLE-VAEVNQ----FGAF LNW-------GLE-------KHLLVPFREQ-PE-----R---MEKGKSYVVYC-FLD-----PKSF-RLVAS ARI----NRFL--DNEEFSLSIGQPVS----ILPYR-TTDLGTEVIV-E----QRHKGLVFSDQI------- -YRNLEIGQPA-RGYIKAI-RKDNKLDVVLEPLGHE--KLEPT-AERIFRELEASGGMLPLHDK------SD PG------------EISKRLKMSKKLFKKG-------IGVLYKERRI------------------------- -------------DIRDDGIYLR------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_856651/1-364 nucleic acid binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------MDSSTVPLDFDS----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------EVY---PKVGLFA-- ------------------------------------------------------------------------ --------------------------------------------AK------------------G---RLTG DYIAV-KRPKGP------EN-HPRTGQGTRPCYRSWGNMRAHTDNEKLAIRTM----KEENTML----QIGK MNTLTVV-ELEERGAWLAADEY----GELL----LPKRQLPEGVAEGSEVKVFLYLDADCEPVITTDKPFAM VDD--IV---GLKVVNAN-KIGAFLDWGMKKDLFVPTREQNKPMQVGHVYLVRLMLD-----HEGR-MVGTS R---LERFLRTDKPP----FKAGDEVT----ALPGE-RTPLGIKAIV-N----GEYAGMLFKNEV-FGRV-- -----TTGRPL-TAWVKQV-RDDGKLDLTLQKPGMA--RMDDA-GELILARLKKQGGSLAVGDKSE-----P ELIYKLLGMSKG--TFKKA---------IGGLYKQGKIVLEDNCITL---------------------VAAD NAPDGE------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01311770/1-273 RNA binding S1 [Desulfuromonas acetoxidans DSM 684]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IQ-I----------------G--CWHTL VVMSRDD--RGA--TLL-------L----------------EEQPVLLPKKEC-------PIAT----QVGD EMTVFVY------------NG--------------------------RQDQLVATFKKPLAEAN---QFALM RVS--QANKFGAF-VDWGLDKELLVPFA----------EQPERLKAGRDYIVHVGID------NSG-RLIGS TRI----ERFLEVDEI--PFNPGEEVD----VLIWQ-LTELGAKVIV-N----NRYAGLIYKDEL------- PPD-LKRGELG-KAYVMRV-RDDNLIDITLRKVGKA--GMDEA-RQVVFQALQAEGRL-PLTDKSA-----P EEIEQMLGLSKK--AFKRA---------VGMLYKEQLIELDEREIRL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------R---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_572119/1-301 RNA binding S1 [Chromohalobacter salexigens DSM 3043]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ -------------------------------------------------A-------------ERQ------ ------------------------------------------------------------------------ -----------------------------------------------P-------------------SCCKV RLLLC-D--KSYPSHQS-PI----Y----------------TPTPPPWPLLAL---------------PGGV IMRTYLS-SVA--------AIM----SRSPDPAPRSSAPG-------RRASSSTRPPLARIGEV---AYLKV VAV--NTTG-AF--LDWGQPKDVLLPFAEQRFRPE---------VGKRVLVMLYE-------DAQG------ -RPVASMRLDRFLADEATDLKAGDQVA----LVVAE-RTDLGFKAVV-D----HRYWGLLYADDIV-----H PP---RRGQRL-TGYIKRV-REDGRLDLAMLPPGEA--GLDVV-GDKVLALLRCHGGFVALGDKTPAAE--- --IKARVGVSKS--AFKQA---------VGRLYKKRLITIEAEGIRL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----TREAI----DDASSD---------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01307318/1-277 nucleic acid binding protein [Oceanobacter sp. RED65]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IQ-I----------------G--RYNDL PVVRQ-L--PRG--LQL-DG--G------------------RAGEILLPKQYL------TGDE-----QVGD VMTVFIYRDSE--------DRL------IA----TTEQPK-------VQVGEFAYLNVVDETKH-------- ----------GCF-LDWGLPKDLFVPFS----------EQRQALKKGKQALVRVYLD-----DSNR----IA ASAKIDSFLLDIDDANV--YKKGDEVT----IVSAA-KSDLGLKVIV-N----GTHWGLIYESDL------- -FEPLKRGDKR-KAYIKRV-RDDHKLEISLRPLGFA--KVEGL-AGEVLDKLKAEGGFIALSDKSS-----P EAIKRVFKCSKN--AFKQA---------IGTLYKQQLIKIEKEGIRL------------------------- ----------------------------L------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01617836/1-294 nucleic acid binding protein [marine gamma proteobacterium HTCC2143]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------M-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------LML------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--QYNRL TVLDD-T--SQG--LYL-GY--R-DDSTDISEEDIDHRERRAEKVF-LPKAEV-------LESP----QVGD KIEVFLYIDSE--------DRI------AA----TTKTPL-------ACLGEFAWLK-IVDVSS----VGAF LDW-------GLP-------KDLFLPYAEQKF------T---PEVGRRVLVRV-YLD-----N-SN-RLAAS TRI----DTFL--DEDGSQFKSGQEVQ----LTIAD-STELGYKAIV-N----NSHWGILYSSEL------- -FQSIRKGQKI-TGYIRKV-RDDKKLDLSLTRIGFG--QVEEL-AEKILATLEKNDGFIMITDKSP-----P ETIYALFKVSKK--VYKKA---------IGVLYKQQKISIEKSGIRL------------------------- ------------------------------------------------------------------------ ------------------------------------------VHNE-------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01103706/1-278 conserved hypothetical protein [gamma proteobacterium KT 71]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MG-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------REI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFHTM EILEI-G--RHS--AIL-DG--GDW-------------------GR-LSMDLR----LCPDTA-----EPGD GLEVFVYLDAS--------GQP----AVTT----EKPAAQ-------LGEVAWVEVVEVNDLGA-------F VDW-------GLP-------RDLFVPFA----------EQQHALKKGSHTLVRVYLD------NQG-RLAGS TRV------DHWIDDSSSALQQGQKVS----LMIAE-RTELGYKAII-N----HQCWGLLYSNEL-YQRVRK -------GQVL-TGFVQRI-RNDGRIDLSLNQPGFSRTKMDEV-SAKILARMEENDGFLSLTDKSP-----P REIYAVFGVSKK--VFKQA---------IGALYKQRIITLETDGIRF------------------------- ----------------------------L------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01625887/1-203 nucleic acid binding protein [marine gamma proteobacterium HTCC2080]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MEVNH----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------GAF------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------ADW----------G-L----------------SKDLF-IPFAEQ----------HHPL-KPGN FTIVKVYLDNQ---------------GRPA------------------------------------------ ----------GST-----------------------------------------RID----------HWI-- -------------EDTATGLKVGEKVS----LLVAE-QTELGFKAII-N----HQFWGLLYSNEL-YRRIRR -------GQAL-DGYIQRI-RDDGKIDLSLNQPGFNNSKIDGV-AQKIVSQLNENSGFLGLTDKSP-----P PAIYAAFGVSKK--VFKQA---------IGSLYKARKITIEAEGIRL------------------------- -----------------------------------------------APDDA-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_383205/1-295 hypothetical protein Gmet_0235 [Geobacter metallireducens GS-15]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MEY------------ ------------------------------------------------------------------------ --------------------------------------------TEQP----------------GLCRLHTL KVVRV-D--KQG--VWL-EA--G------------------GRLAH-LPRREAPQS------------SPGD PVDVFLY---Q--------DGV----GELQA---TCRLPL-------AQAGEFALL-----------TVKSV GSH-------GAF-LDWGLAKDLLAP------------YRLQPERMQVARSYLVKVD----LDPQG------ -RPFANARIDDCLDRGRPDLREGDAVD----LLVWQ-FTDLGAKVIV-N----HRYPALLYRDELPAGAI-- ------VGMPL-SGYVKRL-REDGRLDVTLRKVGAE--AVSDA-RDAILAALAAHGGTLPLHDRSS-----P AAIEKALGMSKK--SFKKA---------VGGLYKDGLVTLNDEGIRLTGKGTANS----------------- ------------------------------------------------------------------------ ------------QSP--------------------------------------------------------- -----ERDRP--------------------------------LP---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_358053/1-274 hypothetical protein Pcar_2647 [Pelobacter carbinolicus DSM 2380]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------ML----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--RVQSL TIDHI-D--QRG--AWL-QA--D------------------ETLVL-LPARQV-------PEES----RQGS QVEVFLYLHAG--------EPM-----ATI------RQPF-------AQVGEFALLRVNQADQS-------- ----------GTF-LEWGMEKELLVPFS----------EQPKRMREGQYHMVRVCLD------DQG-RCFAS GRI----DRWLEQDHIV--LREGQQVE----MVLWQ-FTDLGAKVIV-N----HRYGALLYRDEI------R PD--MQPGDRI-TGFVKTIRRD-GKIDVTLQRGGKA--ATDKA-VETLLDALSKTG-FLPLHDHS-----PA DVIRKQLGMSKK--TFKKA---------VGGLYKAGRIELMPNGIKL-----KKS----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01390394/1-279 RNA binding S1 [Geobacter sp. FRC-32]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------ML----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNEL EVKKL-S--PQG--AYL-QS--E------------------LGEIL-LPRRYV-----PAG-----L-QQGD RLRVFIYLDSE--------DRL-------I----ATTQRA-------RAQVGEFALLTVKEAGA----IGAF LDW-------GLD-------KDILVPFA----------EQNVPMRRGERHLVRLYLD-----KSE--RVSAS ARI----DRFLDNERIV--LEQGEEVD----LVIYQ-FTDLGAKVII-N----GIYSGLLFKNEL-YGR--- ----PGIGSRL-KGYVKKV-RDDKKIDVTLKKSGIQ--GLDTS-RDRILKTLATTGGFLPLTDKSS-----P DVIAEVLKMSKK--TFKKA---------VGSLYKDGFIDLKEEGIEI--RGSREK----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01592707/1-280 nucleic acid binding protein [Geobacter lovleyi SZ]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MRDSM----------------- ------------------------------------------------------------------------ ---------------------------------------------------------PLI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--QYSRL KIARI-T--PSG--AFL-----A------------------SEEGDILLPGKF----IPEGA------KIGT ELEVFVYLDSE---------------DRPV----ATVQKP-------FAVMGEFALLKVKDTNA---KVGSF LDW-------GLD-KDL------LLPFG----------EQLAPVKKGEQVLVCLYRD-------------SS GRIAASARLDRFLKPADAALAEGDGVD----LFIYA-YTDLGAKVVV-N----GRYAGMLFRNEL-YGRPK- ------AGERL-WGYVKKI-RDGGRIDITLRKGGAQ--EARSDRDLVLAALTNAPDGLLPLNDKS-----SP ESISGLLKLSKK--SFKKA---------VGGLYREGLITMSDDGIRL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------K---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01165127/1-278 hypothetical protein MED92_08391 [Oceanospirillum sp. MED92]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MP-EI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--NYSTL EVIKE----KDFG-VYL-DA--GDL-----------------GEIL-LPRKYC------PEDL-----STGD RIRVFIYLDTD--------DYL------IA----TTEKPS-------TIVGEFAMLKVSAVNDV-------- ----------GAF-LDWGLAKEVLLPYSEQKNRPV--------EVGKRYLVR-LYLD-----KNTN------ -RIVASTKIDKFLDKSKPRYKVGEEVQ----LVIAN-RTDLGQKAIV-N----HEHWGMIFKSDL------- -LKTIYPGQKM-KGYIKEV-REDGKITLAMQKPGYS--KVVDT-AGQILEMLKEQDGYITVNDKSS-----P DIIYKLFGVSKK--AFKMA---------VGALLKQGKISIEPGGLRL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------KD-------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_927841/1-276 hypothetical protein Sama_1966 [Shewanella amazonensis SB2B]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QL------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCRL AVVKQ-V--NFG--FYL-NA--G-D----------------FGQVL-LPNKFA-----PDNL------QVGD ELDVFLYLDSE--------DTP------IA----TTQKPL-------AQVGEFANLK-IVSVSR----VGAF LDW-------GLD-------KDLLLPFAEQ-TRP--------PEEGKYQLVHL-HIN-----RADD-RIVAS AKL----DKFL--DKTPASYKPGQEVK----LVIAG-RTDLGYKAII-N----DSHWGLIHQSDV------- -FKPLRAGNKL-KGYIKQV-RHDGKIDLVLNKGTRD--------ELDAHSGVILK----KLQAAGGFLP-LG DKTDADVIYTEL--GMSKKAFKKS----IGGLFKQGKLRITDD----------------------------- ------------------GLYLN------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_750386/1-277 hypothetical protein Sfri_1697 [Shewanella frigidimarina NCIMB 400]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KRYSL EVVKQ-V--NFG--VYL-NA--Q-E----------------LGQVL-LPNKFV-----PTGC------NVGD MVDVFLYLDSE--------DIV------IA----TTQKSL-------AQVGEYAYLK-VIATGP----FGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------AEEGHSYLVYV-HAN-----HADE-RIMAS SKL----DKFV--DKTEAHYTEGEQVN----LIIGG-TTELGYKAII-N----NLHWGVIYANEV------- -FQKLRFGQKV-TGYIKTM-RSDGKIDLVLQKGDKD--ELDKN-ARLIINKLRSANGFLPLHDKT-----DA DVIYDKLGMSKK--AFKKS---------IGGLFKAGEITIESEGIRL------------------------- ------------------------------------------------------------------------ --------------------TV-------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00838846/1-277 conserved hypothetical protein [Shewanella sp. PV-4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KRCTL EIVKR-V--DFG--VYL-NA--H-E----------------FGQVL-LPNKVA-----PQGC------EVGD SVEVFLYLDSE--------DMV------IA----TTKRPK-------AQVGQFAYLK-AVATGP----YGAF LDW-------GLD-------KDLMLPFGEQ-HRE--------IEVGRSYLVYV-YVN-----SADD-RIVAS SKI----DKFL--DRTPPPYRNGQEVS----LIIAG-TTDLGYKAII-D----NGHWGVLYKNEV------- -YQPLKFGQRI-KGFIKRV-RSDDKIDLILQR------------GAKEELDKHATAILMKLNQAGGFLP-LT DKTDAEVIYAEL--AMSKKAFKKS----IGGLYKQQKIAIEADGIRL------------------------- ------------------------------------------------------------------------ -----------------TE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01436050/1-280 conserved hypothetical protein [Shewanella baltica OS195]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTRRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIMAS SKI----DKFL--DKTEPEYTVGEQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRL-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILIKLKQAGGFLALTDKT-----DA EIIYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------TETAE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00582912/1-280 conserved hypothetical protein [Shewanella baltica OS155]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTRRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIMAS SKI----DKFL--DKTDPEYTVGEQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRL-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILIKLKQAGGFLALTDKT-DAE-I- --IYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL------------------------- ------------------------------------------------------------------------ -----------------------------------------------TETAE-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_963758/1-280 hypothetical protein Sputw3181_2380 [Shewanella sp. W3-18-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTRRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIVAS SKI----DKFL--DKTEPDYTAGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRV-KGYIKQVRRD-GKIDLVLQQGNKQ--ELDKH-AHIILIKLKQAGGFLALTDKTD-AE-I- --IYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL-----TET----------------- ------------------------------------------------------------------------ -----------------AE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00815529/1-280 conserved hypothetical protein [Shewanella putrefaciens CN-32]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTGRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIVAS SKI----DKFL--DKTEPDYTAGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRV-KGYIKQVRRD-GKIDLVLQQGNKQ--ELDKH-AHIILIKLKQAGGFLALTDKT-DAE-I- --IYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL-----TEM----------------- ------------------------------------------------------------------------ -----------------AE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_717476/1-279 hypothetical protein SO1868 [Shewanella oneidensis MR-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-AVATGP----FGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAHYEVGQQVD----LFIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRL-KGFIKQVRRD-SKIDLVLQQGSKQ--ELDKN-AHIILVKLKQAGGFLPLTDKTD-----A EVIYEQLGMSKK--AFKKS---------IGGLFKASKLSIDDDGLRL------------------------- -----------------------------------------------TEAD--------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_869262/1-279 hypothetical protein Shewana3_1623 [Shewanella sp. ANA-3]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-VVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAQYEVGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRV-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILVKLKQAGGFLPLTDKTD-----A EVIYEQLGMSKK--AFKKS---------IGGLFKAGKLSIDDDGLRL------------------------- -----------------------------------------------TETD--------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_733690/1-279 hypothetical protein Shewmr4_1555 [Shewanella sp. MR-4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAQYEVGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRV-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILVKLKQAGGFLPLTDKTD-----A EVIYEQLGMSKK--AFKKS---------IGGLFKAGKLSIDDDGLRL------------------------- -----------------------------------------------TEAD--------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_737682/1-279 hypothetical protein Shewmr7_1630 [Shewanella sp. MR-7]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAQYEVGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRV-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILVKLKQAGGFLPLTDKTN-----A EVIYEQLGMSKK--AFKKS---------IGGLFKAGKLSIDDDGLRL-T----------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------EAD----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_811418/1-279 hypothetical protein BT2505 [Bacteroides thetaiotaomicron VPI-5482]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MSIEL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--KFNQL EVVKE----VDF--GLYLDG--G-D----------------EGEIL-LPTRYV------PEDC-----KVGD MLNVFLYLDID--------ERL------IA----TTLTPL-------VQVGQFACLEVSWVN-----QFGAF LNW-------GLM-KDL------FVPFSE---------QKMKMQVGRSYVVHA-HVD-----EESY------ -RIVASAKVERYLSKDMPDYAPGAEVD----ILIWQ-KTDLGFKAII-D----NKYSGLLYENEI------- -FRALETGMQM-KAFVKQV-REDGKVDLILQKPGFE--KVDDF-SKTLLEYIREHGGRINLNDKS-----PA EDIYDTFGVSKK--TFKKG---------VGDLYKKRLISLHETGITL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------AES----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_097825/1-282 hypothetical protein BF0542 [Bacteroides fragilis YCH46]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MKI--------MS-- ------------------------------------------------------------------------ --------------------------------------------IE-L----------------G--KFNQL EVVKQ----VDFG-MYL-DG--G-E----------------EGEIL-LPTRYV------PEDC-----KLGD WLNVFLYLDNE--------ERL------IA----TTLTPL-------VQVGEFACLEVSWVN-----QFGAF LNW-------GLM-KDL------FVPFSE---------QKMKMQVGNKYVIHA-HID-----DESF-RIVAS AK--VDRYLSKEKA----SYQPGEEVN----ILIWQ-KTDLGFKAII-E----NMYSGLLYDSEI------- -FQTLHTGDVL-KAYVKQV-REDGKIDLILQKPGFE--KIDDF-SKTLHRYITEHGGWIGLTDKS-----PA EEIYDTFGVSKK--TFKKA---------VGDLYKKRLILLHEDGIEL------------------------- ------------------------------------------------------------------------ ------------VRP--------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_968293/1-278 nucleic acid binding protein [Bdellovibrio bacteriovorus HD100]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------VQ-I----------------G--QINKL KVVKT-M--EYG--VFL-DG--G-S----------------DGEIL-LPARYQ-------PEKC----EVGD ELEVFVCFDSE--------DRL------VA----MTEMPF-------AMVGTFGLLKVKSIE-----RVGAF LDW-------GLP-------KDLFLPFSEQT-------RDLKIGQNVLVYLYLDNTD----------RISSS MRL----ERFIDKES--GNYEAGQSVD----LLIAA-KTDLGYKAII-N----GRHWGMLYANEV------- -FQQLEYGQRL-KGFIKQV-RDDGKIDLRLNEAGHK--ATADI-GERIMELLKSKGGFLPITDKTD-----P EAIYDLFGVSKK--KYKMA---------LGGLYKKRLITVHDDGIRL-AVGR-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_942868/1-277 RNA binding S1 domain protein [Psychromonas ingrahamii 37]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IK-I----------------G--AYNEL TIIKQ----VDFG-VYL-D---G------------------QEDGEILLPRRY---------VTDDM-KIGQ TVVVFLYCDSE--------DRL------------IATTQK-------PKAEVGEFTSLKVVDTN---RAGAF LDW-------GLP-------KDLLVPFNQ---------QKTPMKEGYGYIVYIYQDD-------------IS ERLVASSKLDRFLDKEEANYKVGDKVD----LLIAE-RSDIGFKAII-N----NKHWGVLFPSDV------- -FGEMGIGKRC-KGYIKQV-REDGKIDLTLTQIGYG--KIDSL-AERVVQTLKLHQGYLQLSDKSS-----P EQIAKILKMSKA--NFKKA---------IGQLYRKKVIHIENNGIRL------------------------- --------------------------------------------NE-------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_609490/1-278 hypothetical protein PSEEN4007 [Pseudomonas entomophila L48]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VEF--GLYLDG--G-A----------------DGEIL-LPRRYF----PKDAEL-----ELDD WLNVFIYLDSE---------------DQLI----ATTEKP------------------KMQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EESRPLKIGDYCVVHAYLD------KRT------ RRITATAKLDRYLDRTPVDYKAGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEV------- -FKFLRSGMHE-KGFIKEV-RHDGKIALSLQPVGEA--LADTL-QEQIMQRLEAAGGVLPVCDKSD-----P AVISQMFNVSKG--NFKKA---------IGALFKQGRIVIHDDR-------IERA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01637998/1-278 RNA binding S1 [Pseudomonas putida W619]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VDF--GLYLDG--G-P----------------DGEIL-LPGRYI----PKNAET-----EVDD WLNVFLYLDSE---------------DQLI----ATTEKP------------------KVQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EEARPLKIGDYCVVHVYLD------KRT------ RRITATSRLDRYLDRTPADYQVGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEI------- -FKFMRSGMHE-KGFIKEV-RHDGKIALSLQPVGQA--LADGL-HEQIMQRLEAEGGVLPVCDKSD-----P EVISRMFNVSKG--NFKKA---------IGALFKQGRIVIHDDR-------IERA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_746672/1-278 hypothetical protein PP_4563 [Pseudomonas putida KT2440]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VDF--GLYLDG--G-A----------------DGEIL-LPGRYI----PKNAET-----EVDD WLNVFIYLDSE---------------DQLI----ATTEKP------------------KVQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EEARPLKIGDYCVVHVYLD------KRT------ RRITATSRLDRYLDVTPADYKVGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEV------- -FKFLRSGMHE-KGFIKEV-RQDGKISLSLQPVGAA--LADTL-QEQIMARLEAEGGVLGVCDKSD-----P ALISKLFNVSKG--NFKKA---------IGGLFKQGLIVIHDDR-------IEKA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00901665/1-278 RNA binding S1 [Pseudomonas putida F1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VDF--GLYLDG--G-A----------------DGEIL-LPGRYI----PKNAET-----EVDD WLNVFIYLDSE---------------DQLI----ATTEKP------------------KVQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EEARPLKIGDYCVVHVYLD------KRT------ RRITATSRLDRYLDVTPADYKVGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEV------- -FKFLRSGMHE-KGFIKEV-RQDGKLSLSLQPVGAA--LADTL-QEQILARLEAEGGVLGVCDKS-----DP ALISKLFNVSKG--NFKKA---------IGGLFKQGLIVIHDDR-------IEKA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_273723/1-278 nucleic acid binding protein [Pseudomonas syringae pv. phaseolicola 1448A]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH-T--NFG--LYL-D---GAQ----------------DGEIL-LPNRYI-----PKDIPT----EDED WLNVFIYLDSE--------DKL------IA----TTEKPK-------VQVSEFASLKVVEVN-----SIGVF LDW-------GLP-------KDLLLPYS--EEKRT--------LQAGEYCVVHVYLD-----KHTR-RITAT ARL------DRYLDKTPASYSVGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEV------- -FKFMRAGKQE-KGYIKEI-RADGNISLSLQPVGAE--AASSL-NSKILSKLRENNGTLPVSDKSD-----P QVISGLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIDL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_236855/1-278 RNA binding S1 [Pseudomonas syringae pv. syringae B728a]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH-T--NFG--LYL-D---GAQ----------------DGEIL-LPNRYI-----PKDVPT----EDED WLNVFIYLDSE--------DKL------LA----TTEKPK-------VQVGEFASLKVVEVN-----SIGVF LDW-------GLP-------KDLLLPYS--EEKRT--------LQAGDYCVVHVYLD-----KHTR-RITAT ARL------DRYLDKTPANYSVGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEV------- -FKFMRAGKQE-KGYIKEI-RSDGNISLSLQPVGAE--AASSL-NSKILTKLRENNGTLPVSDKSD-----P QVISGLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIEL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_791418/1-278 hypothetical protein PSPTO_1593 [Pseudomonas syringae pv. tomato str. DC3000]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----TNFGLYLD-----G------------------AQDGEILLPNRY----IPKDVPT----EDED WLNVFIYLDSE--------DKL------IA----TTEKPK-------VQVGEFASLKVVEVNSI-------- ----------GVF-LDWGLPKDLLLPYS----------EEKRTLQAGEYCVVHVYLD-------KH-----T RRITATARLDRYLDKTPANYSVGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEV------- -FKFMRAGKQE-KGYIKEI-RSDGNISLSLQPVGAE--AASSL-NTKILSKLRENNGTLPVSDKS-----DP QVISGLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIDL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_347178/1-278 RNA binding S1 [Pseudomonas fluorescens PfO-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALV------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QVVKH----TNF--GLYLDG--G-A----------------DGEIL-LPNRYI-----PKDIPS----EDED WLNVFIYLDSD---------------DKLI----ATTEKP------KVQVGEFASLKVVEVNSI-------- ----------GVF-LDWGLPKDLLLPYS----------EEKRQMTAGEYCVVHVYLD-------KH-----T RRITATARLDRYLDKTPANYSAGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEI------- -FKFMRAGMRE-KGFIKEV-RADGKISLSLQPVGQE--AASSL-NSKILAKLRESNGTLAVSDKSD-----P ALISSLFGVSKG--NFKKA---------IGSLYKNGQIVIHADRIEL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------T---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_258690/1-283 hypothetical protein PFL_1564 [Pseudomonas fluorescens Pf-5]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------RVL---EMA--LV-- ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QVVKH----TNF--GLYLDG--G-A----------------DGEIL-LPNRYI-----SKDIPS----EDED WLNVFVYLDSA--------DKL------IA----TTEKPK-------VQVGEFASLKVVEVNSI-------- ----------GVF-LDWGLPKDLLLPYS----------EEKRQMNAGEYCVVHVYLD-------KH-----T RRITATARLDRYLDKTPANYKAGQEVD----LLVAE-STDMGFKAII-N----NKHWGLIHKNEV------- -FKFLRSGMQE-KGFIKEV-RADGKISLSLQPVGEQ--AATSL-NSKILAKLRENDGSLAVSDKS-----DP ALISSLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIEL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------S---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00415804/1-279 RNA binding S1 [Azotobacter vinelandii AvOP]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH----TDF--GLYLDD--G-E----------------DGEIL-LPRRYV-----PRDRPS----EVGD RLDVFVYLDSD--------DRL------IA----TTLRPK-------IQVGGFASLKVVQIDRV-------- ----------GLF-LDWGLPKDLLLPHS----------EEKRPLQVGDHCVVHAYLD------------ART RRIVATARLDRYLDRTPPDYRPGQAVE----LLVVE-QTPLGFKAIV-E----GRHWGLIHRNEL------- -FKPVRPGMRE-RGYIRDV-RADGRIGLTLQPAGQA--ARDEL-AERILARLDEEGGTLPFGDKTP-----P ERIAQLFGVSKG--TFKKA---------IGGLYKQGLIVIHDDR---------------------------- ----------------------------------------------------------------------IE RSR--------------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01525610/1-280 RNA binding S1 [Pseudomonas mendocina ymp]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RMNSL QVVKH----TDF--GLYLDG--G-A----------------DGEIL-LPKRYI-----PKDTPS----EVDD WLNVFIYLDSE--------DKL------IA----TTLKPK-------IQLGEFASLKVVDINRV-------- ----------GLF-FDWGLPKDLLLPHS----------EEKRPLQIGDYCVIYLYLD------KRT------ RRLTATARLDRHLDKVPANYQVGQEVD----LLVVE-RTDLGFKAII-D----GKHWGLIHKNEL------- -FKFIRSGMRE-KGYIKEL-RADGKISLSLQPIGRE--AASGL-AEQIIERLRAQGGVLALGDKSP-----P EAIAEQFRVSKG--NFKKA---------IGGLYKQGLIHIHDDRIEL------------------------- ----------------------------LDN----------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01295814/1-279 hypothetical protein PaerP_01002311 [Pseudomonas aeruginosa PA7]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH----TEFGLYLD-----GTQ----------------HGEIL-LPRRYV-----PKDQPS----EVGD WLNVFIYLDSD--------DRL------IA----TTQTPK-------VQVGGFASLKVVEINRI-------- ----------GLF-LDWGLPKDLLLPHS----------EEKRPLQVGDYCVVYVYLD-----KRTN------ -RITATARLDRQLDNVPPRYSVGQAVD----LLVVE-RTEMGFKAII-E----GKHWGLIHKNEA------- -FRFLRSGMRE-QGYIREL-RADGKIALSLQPVGAE--AAVEL-SQQILARLLEAGGSLPLSDKSS-----P EDIHRLFGVSKG--TFKKA---------IGGLYKKGLILIHPERIEL------QR----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >AAT51018/1-280 PA1116 [synthetic construct]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH-T--EFG--LYL-D---GTQ----------------HGEIL-LPKRYV-----PKDQPS----EVGD WLNVFIYLDSD--------DRL------------IATTQT-------PKVQVGGFASPKVVEIN---RIGLF LDW-------GLP-------KDLLLPHS----------EEKRPLQVGDYCVVYVYLD-----KRTN-RITAT ARL------DRQLDNLPPRYSVGQAVD----LLVVE-RTEMGFKAII-E----GKHWGLIHKNE-------- AFKFLRSGMRE-QGYIKEL-RADGKIALSLQPVGAE--AAVEL-SQQILARLLEAGGSLPLSDKS-----SP EDIHRLFGVSKG--TFKKA---------IGGLYKKGLILIHPEHIEL------------------------- --PRG------------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_249807/1-279 hypothetical protein PA1116 [Pseudomonas aeruginosa PAO1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH----TEFGLYLD-----GTQ----------------HGEIL-LPKRYV-----PKDQPS----EVGD WLNVFIYLDSD--------DRL------IA----TTQTPK-------VQVGGFASLKVVEINRI-------- ----------GLF-LDWGLPKDLLLPHS----------EEKRPLQVGDYCVVYVYLD-----KRTN------ -RITATARLDRQLDNLPPRYSVGQAVD----LLVVE-RTEMGFKAII-E----GKHWGLIHKNE-------- AFKFLRSGMRE-QGYIKEL-RADGKIALSLQPVGAE--AAVEL-SQQILARLLEAGGSLPLSDKS-----SP EDIHRLFGVSKG--TFKKA---------IGGLYKKGLILIHPERIEL------------------------- ------------------------------------------------------------------------ --------------P----------------------------------------R---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_348585/1-276 Ribosomal protein S1 [Clostridium acetobutylicum ATCC 824]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MRNELNSNEY----------------- ------------------------------------------------------------------------ ---------------------------------------------------------NLMASRQSR------ ------------------------------------------------------------------------ -------------------------------------------------------------------KILTG TLAAM----ENV------KI--G------------------QDENVDCGVVFY------------------D EFKILI--PIR--------EMN------------VSREDK-------------------------------- --------------------------------------RVIRSMIGAEIDFIVMEFD-----DENR-TAIAS RKEAMELRKNLE----LKKHKVGEKIF----VRVTS-VGRNNCRVDC------YGIEYRVPINEIDYGYIDK VDKYVQVGDVV-PAIIKELDIDNNIVVVSIKEAKED--PYLGI-VKSLNKGGEYLGVVTGIKDYGIFLT-IR KGVNCLCPFP----NWANF----SPA--VGEKFVVRIKSINYDEKKI-NANLMRP----------------- -----------INQRNKYNPTWG------------------------------------------------- -----------------LG----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_623612/1-257 Ribosomal protein S1 [Thermoanaerobacter tengcongensis MB4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------MTE----------------------------------------AWQDIYASRQSNK---ILTGT LSAIESQEDKNFA-VIFYDGVKVIIPFEEMGIENINK-TIVRSMIGAEIDFVVRGID-----TEKE-IAIAS RKFAMNLRKKYE----LPKHEEGDVIL----ARIVA-IGKNHAIAEV------YGIETKVPKEEIGYGYIDR INDLLQVGDRV-PAKITKLDIENSVVEISIKQTKPN--PFEQV-DTKYKKGGEYLGTVTGSQPYGYFVN-LE PGID--VLCPNP--YWKTK-------IEKGDKVTVRITRIDHKKQRI-TGVLKRL----------------- ------VRKAQ------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00884659/1-258 RNA binding S1 [Caldicellulosiruptor saccharolyticus DSM 8903]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MKQTQKD-EV----------------- ------------------------------------------------------------------------ -------------------------------------------------R-------RLL---QKS--YN-- ---------------------------Y-------------------------------------------- ----------------------------------------------------------------K--TILTG QLAGK-K-------------------------------------------------------------KIGD ------------------------------------------------------------------------ -----KTYG-----VVLYQGIRCLLPAEEVDLSTETVNDKIGALLGATIEFVVTDIQ-------KD-NVFIS RKV----AKQLRRIEFENNVKEGQIIN----GRVIG-VSPKNVYVDA------FGYEFGLTAKDVDYKWIHD MRERFKVGDSV-KAKVIS----KNPPQISIKEALTT--PWEKD-PDRYKVGEQYVGKVVAVANLGIFVDLIE DGRQVLCPPMGL------------KTPVIGSVVVVLIKDINKEQKKM------------------------- -------------------------------------------WGD-------------------------- -------IVRIISEP--------------------------------------------------------- --------RI-------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00886356/1-258 RNA binding S1 [Caldicellulosiruptor saccharolyticus DSM 8903]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MKQTKKD-EV----------------- ------------------------------------------------------------------------ -------------------------------------------------R-------RLL---QKS--YN-- ---------------------------Y-------------------------------------------- ----------------------------------------------------------------K--TILTG TVTGK-K-------------------------------------------------------------KVGD ------------------------------------------------------------------------ -----KTYG-----VVLYQGTRCLMPPEEVDLSTESINDPIGALLGATIEFVVTDIQ-------KD-NVFIS RKI----AKQLRRIEFENNVKEGQIIN----GRVIG-VSPKNVYVDA------FGYEFGLTAKDVDYKWIHD MRERFKVGDSV-KAKVIS----KNPPQISIKEAAMT--PWDKD-PDRYKVGEQYVGKVVAVANLGIFIDLIE DGRQVLCPPMGL------------KTPVIGSTVVVLIKDIDKQQKKM------------------------- -------------------------------------------WGD-------------------------- -------IVRVISEP--------------------------------------------------------- --------RI-------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_229244/1-543 ribosomal protein S1 [Thermotoga maritima MSB8]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-PF----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EFN---DEI--LS-- ---------------------------QYEPEE--------------------------------------- --------------------------------------------FR-R----------------G--QIVKG VVIGK-E--DDG--VVV-DF--G-G----------------KSEGF-VPENEL----IKSLDEY----KVGE NLTLQIL-NLN--------YEE-----RSI----LSERRP-------VLRKTLEELRKDYEEKK---PVKAR IVS--QTKG-GYN-VLLKGVVSAFLPGSHSLL------RRNDPMPEKEIEVIILEMA----QTRRGPRIVVS RRALQDKKI----EEFFSEKKVGDIVE----GTVKG-ISNAGVEVEI-S----EGVRGFIPRSELSYDTRIS PEDIVKPGQNI-TAKIIELDKVKKNVILSLKKLMPD--PWEKV-EEKYPVGKVVSGEVTSIHPFGFFVR-LE PGVEGLVPRSEV--FWGNARKSLEEVVSVGDLVEVEVINVDKENRKL-TLSYRKA-------KGDPWENIED RYNVNNVVTGKVTGIIKQGAFVE-----LEEGVEGFVPVSEISWKR--IDEPGEILKIGEKVKVKILKIDKE NRKITLSIKRTQENP--WE-RA---LKELKPDSIVSGTIKK-IVNSGVVVEV--------EEYDVEGFVPNN HL---------------LSEPETGKALNLVVLRIDPDEVFGGRMILSEKR--------YEERKNIEEYK--- --------------KMVEKESSQKSIGDLLKK----------------NGE--------------------- ------------------------------------------------------------------------ ------------ >ZP_01652472/1-543 RNA binding S1 [Thermotoga petrophila RKU-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-PF----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EFN---DEI--LS-- ---------------------------QYEPEE--------------------------------------- --------------------------------------------FR-R----------------G--QIVTG VVIGK-E--DGG--VVV-DF--G-G----------------KSEGF-VPENEL----IKSLDEY----KVGE NLTLQIL-NLN--------YEE-----RSI----LSERRP-------VLRKTLEELRKDYEEKK---PVKAR IVS--QTKG-GYN-VLLKGVVSAFLPGSHSLL------RRNDPIPEKEIEVIILEMV----QTKRGSRIVVS RRALQDRKI----EEFFSEKKVGDIIE----GTVKG-ISNAGVEVEI-S----EGIRGFIPKSELSYDNRIS PEDVVKPGQNI-TAKIIELDERKKNVILSLKRLMPD--PWEKV-KEKYPVGKVVGGEVISIHSFGFFVR-LE PGVEGLVPRSEV--FWGNARKNLEEVVSVGDLVKVEVINVDKENRKL-TLSYRKA-------KGDPWENIED RYNVNNVVTGKVTGIIKQGAFVE-----LEEGVEGFVPVSEISWKR--IDEPGEILKIGEKVKVKILKIDKE NRKITLSIRRTQENP--WE-RA---LKELKPDSIVRGTIER-IVNSGVIVKV--------EKYDVEGFVPNN HL------------VSEPETGKILNLVVLRIDPDEVFGGRMILSEKRYEE--------RKNIEEYKKMV--- -----------------EKESSQKTIGDLLKK----------------NGE--------------------- ------------------------------------------------------------------------ ------------ >AAQ75180/1-556 30S ribosomal protein S1 [Alvinella pompejana epibiont 7G3]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------MSTKLEDIEVEDVDF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------AML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------KR-D----------------TNNDLVEG TIVKI-NEAENQ--VVV-DI--G-R----------------KNEAI-MSLDQI--R-DEDGNIM--F-NIGD TIPVVIT-KRN---------------GERVS---ISYELA-------EKRIALSEFIDEYDDEE-EYIVEGV IVR--KNRG-GFV-VDVS-GLEFFMPKTLSYISPK------INPIGKRVKALIVKVD-----KDKQ-SVIVS RKDLIEREKKEIQEIVDKLLTDKAVVL----GTVKK-ITSYGMFVDV------GGLDGLVHYSKISHKGPVN PAKHFKEGDEV-NVVAIDFDKKKKHLSLSIKDATPD--PWEDI-DKSLRRGDSVSVEVSNIEPYGAFVD-LG NDLEAFLHVSEI--SWDKNVKHPKDYLNIGDKLDVEVIEIDKSKRKL-RVSRKTL-------LPKPIEIFAS KYRVGDIVKGKISSITDFGAFVK------IDDIEGLIHNQEVSWDK--SATAKNSLKKGDEVEAKIIKIDIE NGKISLSKKALEESP--IS-KF---AKNHRVGDVVEGSVKD-KKDFGIFVSL---------DKGVDALLRLE DLG-----------AIKFDELQKGDSVRGIITYLDPKNGKIRISARRLQK--------QEEREALKKVN--- -----------------KEQDDILTLGDVLKEYLNK------------------------------------ ------------------------------------------------------------------------ ------------ >YP_393386/1-551 RNA binding S1 [Thiomicrospira denitrificans ATCC 33889]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MAFDNESFEEEENF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------EMFAASEKQ--QE-- ------------------------------------------------------------------------ -----------------------------------------------T----------------S--RIVEG EVVEI-Q--ADENRALV-GV--G-D----------------KLEGI-LSLDEI----SENGVLK--F-NVGD KIKVMVTGYYN--------ERP------KI----SYKKVL-------EQQKTIDFIDKHKENFE-DIIIDGV ITK--KNRG-GYV-VEAD-DVTFFMPRSLAAF------KDTDEVLGRKIKAQVVKID-----AEQN-SIVVS RRKLFNDERKKKKEIIDKLMEDDTTIE----GTIKK-ITSYGMFVDV------GGVDGLVHYNEISYKGPVN PSKLYKEGDAV-TVKAISYDKDKRHLSLSIKAVQSD--PWAEV-ESELDEGDTITVTVSNIEAYGVFVD-LG NDIEGFLHISEI--SWDKNVKNPNDYLTVGQEIDVEVIEINPKTHKL-RVSLKRL-------LAKPFDEFMK KHNEGDVITGTVTSLTDFGAFVR------IDGIEGLLHNQDISWDK--NVRCKDVLKTGDEVEVKIAKINPE DQKISLNRKALLESP--ID-SF---SKSHKVNSVVSGTIRD-IKDFGVFVSL---E----DG--VDALIRDE DLS-----------PLQKSDLEVGQQIEAAIAVIDTRRDRIRLSVKKLDY--------IKNQAMLDEIN--- ----------------DDESH---SLGDLIKDKFK------------------------------------- ------------------------------------------------------------------------ ------------ >YP_892406/1-557 30S ribosomal protein S1 [Campylobacter fetus subsp. fetus 82-40]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MAEVNKIVRNDMSDKIDVEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AMF---EES--LK-- ------------------------------------------------------------------------ --------------------------------------------AE-E----------------S--TICDG VIVNI-K--DDE--VFV-DV--R-K----------------KSEGV-MNISEI----TDDGGSL--LYNIGD TIKVAITGSRN---------------GRPI----VSHKKA-------LRKEKVKTFIDNFDENA-ENIYDIK IIS--KNKG-GFVAISED-GIEFFMPKSQSGF------RDSNQVMNKTFKAKVLKVD-----KNDQ-SIIVS RKKLLDEDRRKRKEAIANIIDNTDIIE----GTIKK-ITTYGMFVDV------GGIDGLVHYSEISYKGPVN PNTLYKEGDKV-DVKIIKYDNDKKHLSLSIKAATPD--PWDEI-KDGLEVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDFIKENEELDVEVIEIDVNERRL-RVSLKNL-------LPKPFDEFSS KFKEGDIVKGVVTTLTNFGAFVR------VGALEGLLHNEDSSWDR--NDKCKDILKTGDEIDVKIIKIDDK NQKISLSQKDLKDSP--VT-QY---AKVHSVGDIVTGTVRD-IKDFGIFVSL--------EGN-VDALIRKE DIG-----------SLDPLTLKAGDKIEAAIAFIDEKKNRIRLSVKRLAR--------QKEREVLNEIN--- ----------------DDDKM---TLGDIIKEQLA------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01374976/1-558 hypothetical protein Ccon1_01000402 [Campylobacter concisus 13826]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MAVNKSVQLGKAKDEDIEDIDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------KT------------------E--EDSDA KIVSI-N--GDE--VLI-DV--G-K----------------KSEGI-LNVSEI---TDANGNLT--H-KVGD TIKVVIT---G--------SRN----GRPI----VSHKKA-------LRKEKVKAFIEAYDPEN-SGEIDVK VVG--KNKG-GFITQDAN-GVEFFLPRTHSGF------KNAEGVVGKSYKVRVIKVD-----KEEN-SIVVS RKKILDDDRKKRKEALSSIVENDSVIE----GTVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSSLYKEGDKV-LVKVISYDNEKRHLSLSIKAATPD--PWEEIINDGLEVGDTIKVTVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDHISEGQEIDVEVIEIDAKGHRL-RVSLKNL-------LPKPFDEFKA KFKEGDVVKGVVTTITNFGAFVR------VGCVEGLLHNEDASWDR--NDKCKDMFKAGDELEVKIIKIDSA EQKISLSLKDLKQSP--VQ-AF---ANKFSVGDIVKGTIRD-IKDFGVFVEL---------GDNVDALIRKE DLG-----------SVDASTLKIGDEIEAAIAFIDEKKNRIRLSIRRLAK--------QKEREVLNEIN--- ------------------DNDDKVTLGDIIKEQLR------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01376609/1-557 hypothetical protein Ccur5_01000714 [Campylobacter curvus 525.92]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MAVNKSVQLSKAKDEDIEDIDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------KT------------------E--EDSDG VIVDI-K--GDE--VLV-NV--G-K----------------KSEGI-LNISEI--T-DANGDLM--Y-KVGD TIKVAIT---G--------SRG----GRPI----VSHKKA-------LRKEKVKAFIEAYDPEN-SGEIDVK IIN--KNKG-GFVAQDAN-GVEFFLPKTQSGF------KNANDVVGKSYKVRVIKVD-----KDEN-SIVVS RKKILDDDRKKRKEALANIVDNADVIE----GTIKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSSLYNEGDKV-LVKVISYDNEKRHLSLSIKAAMPD--PWEEILSDGLEVGDTIKVTVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDHISEGQEIDVEVIEIDAKGHRL-RVSLKNL-------LPKPFDEFKA KFKEGDVVKGVVTTVTNFGAFIR------IDCVEGLLHNEDASWDR--NDKCKDMFKPGDEVEVKIIKIDNA EQKISLSLKDLKQSP--VQ-EF---ANKFNVGDIVKGTIRD-IKDFGVFVEL---------GDNVDALIRKE DLG-----------SVDVQSLKIGDEIEAAIAFIDEKKNRIRLSIRRLAK--------QKEREVLNEIN--- ----------------DNDKV---TLGDIIKEQLQ------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_00368554/1-517 ribosomal protein S1 , putative [Campylobacter lari RM2100]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MSEVNKKVQNRLEDIIIEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------QML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------SD-E----------------E--ATTQG IIVAI-K--GDE--VFV-NV--G-Q----------------KSEGI-LAIEEI--Q-NDKGEFI--F-KEGD TLEVAIV---G--------SRG----GRSL----LSHKKA-------LRKQKVKEFIDNYKDDES--MFDVK IIG--KNRG-GFVAVDEN-GVEFFLPKSQSSF------KDSNNIINKTFKVKIIKID-----KEAQ-SIVVS RKKIVDEERKKRKEIISNVLNQEEIIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSSLYNEGDKV-PVKVIKYDKDKKHLSLSIKLAMPD--PWDEI-KDGLEVGDTIKVTVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNAKNPKDYISEGQELDVEVIEINAKERRL-RVSLKNL-------LAKPFDEFLK SHKVGDVVKGSVTSVTNFGAFVK------IANLEGLLHNEDASWNR--NDKCKDMYKVGDVIEVKIIKLDKE NQKISLSTKELQKSP--VQ-VY---AQKHQVNDIISGKIRD-IKDFGVFVEL---E----EG--VDALIHKE DLG-----------NVDFSSLKVGDIIEALIVFIDEKKN--------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00370169/1-557 ribosomal protein S1, putative [Campylobacter upsaliensis RM3195]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MNEANKKVQNNIEDLFGEEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------KLL---DAY--DK-- ------------------------------------------------------------------------ --------------------------------------------SKEE----------------A---IFEG KIVAI-K--NDE--VYV-DI--G-K----------------KSEGL-LALEEI--Q-DDKGNLI--F-NVGD SIKVATM---G--------SRG----GRIV----VSHKKA-------LRKEKVVEFIKNYNEENEN-IFDVK VIS--KNKG-GLVAVDND-GVEFFIPKSQYSFK------NSNNPIGKNFKVKIIKVD-----KEEQ-SIVAS RKRVLEDERKKRKEIISEILDKNELIE----GLVKK-ITTYGIFVDV------GGIDGLVHYSEISYKGPVN PSSLYKEGDKV-PVKIIKYDKDKKHLSLSIKAALPD--PWSEI-KDSLEVGDTIKVVVSNIEPYGAFVD-LG NDIEGFLHISEI--SWNKNIKNPKDYISKGEEIDVEVIEINSDERRL-RVSLRNL-------LSKPFDEFSK THKVGDMTQGIVTSITAFGAFVK------IDNVEGLLHNEDASWDR--NDKCKELFKIGDEIKVKIIKIDED HQKISLSTKELKNSP--VQ-EY---AKTHKIGDVVKGIIRD-IKDFGIFVEL---------SENVDALIHKE DIS-----------SAMLETLKIDDEIEAAIAFIDEKKNRIRLSVKNLLR--------LKEREVLNEIN--- -------------------GDDKMTLGDIIKEQLS------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_00367065/1-556 ribosomal protein S1 VC1915 , putative [Campylobacter coli RM2228]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQNNLEDYLEDEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SR-E----------------E--TITEG VIVEI-K--NDE--VYV-DI--G-R----------------KSEGI-LALNEI------QDENANLLFKVGD SIKVAVV---G--------SRG----GRSL----LSHKKA-------LRKEKVIDFIQNYKEDD-EYIFEVK VVG--KNKG-GLV-VVNDDDVEFFLPKSQYGF------KENNNLIGKTFKVKIIKVD-----KEEQ-SIIVS RKKTLDDERKKRKELINNIAQQEGLIE----GVVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSILYKEGDKV-PVKVVKYDKDRKHLSLSIKAALPD--PWGEI-KDSLEVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYISKGQEIDVEVIEINSDERRL-RVSLRNL-------LSKPFDEFMK NHKIGDVIEGEVTSTTSFGAFVK------IGSVEGLLHNEDASWDR--NEKCKDKFNNGDIIKVKIIKIDEE GQKISLSIKELSESP--VQ-EY---AKNHKVGDIVKGKIRD-IKDFGVFVEL---------NKNVDALIHKE DIS-----------ASTLENLKIGDEIEAAIAFIDEKKNRIRLSVKNLVR--------IKEREVLNEIN--- ----------------SDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01377833/1-556 hypothetical protein Cjejd_01001494 [Campylobacter jejuni subsp. doylei 269.97]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQGSVDDYLEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SR-E----------------E--ATTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI------QDDNSKLLFNVGN SIKVAVV---G--------SRS----GRSL----LSHKKA-------LRKEKVVEFIKNYQENQ-DDIFNVK VVG--KNKG-GLIVVDDN-DVEFFLPKSQYGF------KEINNITGKTFKVKIIKIN-----KDEQ-SIIVS RKKTLDDERKKRKELISNIVQQENLIE----GIVKK-ITTYGMFVDV------GSVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSVKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPSERRL-RVSLRNL-------LSRPFDEFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDYIEAAIVFIDEKKNRIRLSVKNLVR--------MKEREVFNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01070310/1-556 ribosomal protein S1 [Campylobacter jejuni subsp. jejuni 260.94]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MSEVNKKVQGGVDDYL-EEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SREE----------------A---TTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI--Q-DDNSKLL--F-NVGD SIKVAVM---G--------SRG----GRSL----LSHKKA-------LRKEKVIEFIKNYQENQDD-IFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGFK------ETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNVAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDGFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------MKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >YP_001000568/1-556 ribosomal protein S1 [Campylobacter jejuni subsp. jejuni 81-176]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQGGVDDYLEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SREE-------------------ATTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI------QGDNSKLLFNVGD SIKVAVMGSRG---------------GRSL----LSHKKA-------LRKEKVIEFIKNYQENQ-DDIFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGF------KETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNIAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDGFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------MKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >YP_178970/1-556 30S ribosomal protein S1 [Campylobacter jejuni RM1221]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQDGVDDYLEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SR-E----------------E--ATTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI------QGDNSKLLFNVGD SIKVAVM---G--------SRG----GRSL----LSHKKA-------LRKEKVIEFIKNYQENQ-DDIFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGF------KETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNVAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDEFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSAKELNSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------IKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01071608/1-556 30S ribosomal protein S1 [Campylobacter jejuni subsp. jejuni HB93-13]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MSEVNKKVQDGVDDYL-EEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SREE----------------A---TTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI--Q-DDNSKLL--F-NVGD SIKVAVM---G--------SRG----GRSL----LSHKKA-------LRKEKVIEFIKNYQENQDD-IFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGFK------ETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNVAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDIGDTIKVIVSNIEPYGAFVD-LE NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDEFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGAIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------IKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >NP_282046/1-556 30S ribosomal protein S1 [Campylobacter jejuni subsp. jejuni NCTC 11168]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQDGVDDYLEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SREE-------------------ATTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI------QGDNSKLLFNVGD SIKVAVMGSRG---------------GRSL----LSHKKA-------LRKEKVIEFIKNYQENQ-DDIFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGF------KETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNVAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDIGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDEFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGAIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------IKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >YP_664287/1-552 30S ribosomal protein S1 [Helicobacter acinonychis str. Sheeba]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------MSKLADHQYFNDEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KLL---EKEEALE-- ------------------------------------------------------------------------ -----------------------------------------------K----------------G--TIKEG LIVSI-NENDGY--AMV-SV-GG------------------KTEGR-LALSEI--K-DEKGQLL--Y-QKND PIVVHVS---E--------RGE----RPSV----SYKKAI-------SQQKVQAKIEELGENYE-NAIIEGK IVG--KNKG-GYI-VESQ-GVEYFLSRSHSSL------KNDANHIGKCIKACIIRVD-----KENH-SINIS RKRFFEVNDKRQLEISKELLESAEPVL----GIVRQ-IAPFGVFVEA------KGIEGLVHYSEISHKGPVN PEKYYKEGDEV-YVKAIAYDEEKRRLSLSIKATIED--PWEEI-QGKLKSGYAIKVVVSNIEHYGVFVD-IG NDIEGFLHVSEI--SWDKNVSHPNTYLSLGQEIDVKIIDIDPKNRRL-RVSLKQL-------TNRPFDVFET KYQVGDVIEGKVATLTDFGAFLN------LGGVDGLLHNHDAFWDK--DKKCKDHYKIGDVIKVKILKINKK DKKVSLSAKHLLTSP--TE-KF---AQKHKMDSVIQGKVVS-IKDFGVFIHA--------DG--IDVLIKNE DLNPLKKDEI-----------KMGQEITCVVVAIEKSNNKVRASVHRLER--------KKEKEELQAFN--- ------------------TNNDKMTLGDILKE---KL----------------------------------- ------------------------------------------------------------------------ ------------ >NP_223699/1-552 30S ribosomal protein S1 [Helicobacter pylori J99]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------MSKIADDQYFNDEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KLL---EKEETLE-- ------------------------------------------------------------------------ -----------------------------------------------K----------------G--TIKEG LIVSI-NENDGY--AMV-SV-GG------------------KTEGR-LALNEI---TDEKGQLM--Y-QKND PIVVHVS---E--------KGE----HPSV----SYKKAI-------SQQKIQAKIEELGENYE-NAIIEGK IVG--KNKG-GYI-VESQ-GVEYFLSRSHSSL------KNDANHIGKRIKACIIRVD-----KENH-SINIS RKRFFEVNDKRQLEISKELLEATEPVL----GVVRQ-ITPFGIFVKF------KGIDGLVHYSEISHKGPVN PEKYYKEGDEV-YVKAIAYDEEKRRLSLSIKATIED--PWEEI-QDKLKPGYAIKVVVSNIEHYGVFVD-IG NDIEGFLHVSEI--SWDKNVSHPSHYLSVGQEIDVKIIDIDPKNRRL-RVSLKQL-------TNRPFDVFES KHQVGDIVEGKVATLTDFGAFLN------LGGVDGLLHNHDAFWDK--DKKCKDHYKIGDVIKVKILKINKK DKKISLSAKHLVTSP--TE-EF---AQKHKTDSVIQGKVVS-IKDFGVFIHA--------DG--IDVLIKNE DLNPLKKDEI-----------KIGQEITCVVVAIEKSNNKVRASVHRLER--------KKEKEELQAFN--- ------------------TSDDKMTLGDILKE---KL----------------------------------- ------------------------------------------------------------------------ ------------ >NP_207197/1-556 30S ribosomal protein S1 [Helicobacter pylori 26695]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------MSKIADDQNFNDEEENF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KLF---KKE--LE-- ---------------------------KEET----------------------------------------- --------------------------------------------LE-K----------------G--TIKEG LVVSI-NENDGY--AMV-SV-GG------------------KTEGR-LALNEI---TDEKGQLL--Y-QKND PIIVHVS---E--------KGE----HPSV----SYKKAI-------SQQKIQAKIEELGENYE-NAIIEGK IVG--KNKG-GYI-VESQ-GVEYFLSRSHSSL------KNDANHIGKRVKACIIRVD-----KENH-SINIS RKRFFEVNDKRQLEVSKELLEATEPVL----GVVRQ-ITPFGIFVEA------KGIEGLVHYSEISHKGPVN PEKYYKEGDEV-YVKAIAYDAEKRRLSLSIKATIED--PWEEI-QDKLKPGYAIKVVVSNIEHYGVFVD-IG NDIEGFLHVSEI--SWDKNVSHPNNYLSVGQEIDVKIIDIDPKNRRL-RVSLKQL-------TNRPFDVFES KHQVGDVLEGKVATLTDFGAFLN------LGGVDGLLHNHDAFWDK--DKKCKDHYKIGDVIKVKILKINKK DKKISLSAKHLVTSP--TE-EF---AQKHKTDSVIQGKVVS-IKDFGVFINA--------DG--IDVLIKNE DLNPLKKDEI-----------KIGQEITCVVVAIEKSNNKVRASVHRLER--------KKEKEELQAFN--- ------------------TSDDKMTLGDILKE---KL----------------------------------- ------------------------------------------------------------------------ ------------ >YP_627734/1-556 ribosomal protein S1 [Helicobacter pylori HPAG1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------MSKIADDQNFNDEEENF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KLF---KKQ--LE-- ---------------------------KEET----------------------------------------- --------------------------------------------LE-K----------------G--TIKEG LIVSI-NENDGY--AMV-SV-GG------------------KTEGR-LALSEI--T-DEKGQLL--Y-QKND PIVVHVS---E--------KGE----HPSV----SYKKAI-------SQQKIQAKIEELGENYE-NAIIEGK IVG--KNKG-GYI-VESQ-GVEYFLSRSHSSL------KNDANHIGKRIKACIIRVD-----KENH-SINIS RKRFFEVNDKRQLEISKELLEATEPVL----GVVCQ-ITPFGIFVEA------KGIEGLVHYSEISHKGPVN PEKYYKEGDEV-YVKAIAYDAEKRRLSLSIKATIED--PWEEI-QDKLKPGYAIKVMVSNIEHYGVFVD-IG NDIEGFLHVSEI--SWDKNVSHPNNYLSVGQEIDVKIIDIDPKNRRL-RVSLKQL-------TNRPFDVFES KHQVGDVLEGKVATLTDFGAFLN------LGGVDGLLHNHDAFWDK--DKKCKDHYKIGDVIKVKILKINKK DKKISLSAKHLVTSP--TE-EF---AQKHKTDSVIQGKVVS-IKDFGVFINA--------DG--IDVLIKNE DLN-----------PLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLER--------KKEKEELQAFN--- ------------------TSDDKMTLGDILKE---KL----------------------------------- ------------------------------------------------------------------------ ------------ >NP_859668/1-552 30S ribosomal protein S1 [Helicobacter hepaticus ATCC 51449]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------MLVNLE-HDDFITEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EAS--EK-- ---------------------------K-------------------------------------------- --------------------------------------------AD-A----------------G--AIQIG EIVAI---TDEY--AMV-AL--ANE----------------KSEAM-LRLGEI--Q-DDNGNLL--F-NIND KIEVFVT---P--------GRG----GRPN----ASYKKA-------LKSKRIVEKIAQIADNYQDKIIEAK VIK--KNKG-GFI-LEYD-GIDVFMPRRDSAIR------EDDKAIGKIYKVAIVNIN-----KESN-SIIVS RKRFFEIDDKNRQNVSAKLLENDGVQK----GIVKK-IAPFGVFVDV------YGVEGLVHYTELSHKGPIN PAKNFKEGDEV-VVKVLGYDEKKRRLSLSMKALGDD--PWKEI-EKELEVGYSIKVSVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKHPSSYLNVGQEIDVEIIEIDTDNKRL-RVSLKKL-------LDKPFVYFAK THQVGEIIKGKIATLTDFGAFVN------LGGVDGLLHNEDAYWDK--KSKCKDGFKVGDEIEVKIIKIDKE HERVSLSKKLLEHSP--AR-EF---GKTHKVDDVARGSIID-IKDFGIFIKI--------DE--MEALIRNE DIQ-----------PLKKEDLKAGEEIECVITHIDEENNKVRASIKRLER--------QKEKETLKAFN--- -------------------SEEKMTLGDKLKN---RL----------------------------------- ------------------------------------------------------------------------ ------------ >NP_907487/1-553 30S ribosomal protein S1 [Wolinella succinogenes DSM 1740]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------MVENQKFNNEHLGEDEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------SML---EES--WE-- ---------------------------K-------------------------------------------- --------------------------------------------SE-N----------------E--TITKG TIVAI---NDDT--VLV-DV--G-E----------------KIEGR-INIAEI--L-DEEGKPK--Y-KAGD ELPIIIT---G--------NRN----ERPM----ISHQKA-------IRREKLKEKIAAFGEDYRDVVVEGV ITK--KNRG-GYV-IESE-GLEYFMPKFMSALK------EDAKNLGKTIKACIINIK-----PEDD-TIVVS RKRFFELDNKVKKEGAAKLLEATEPLP----GVVKK-ITSFGMFVEV------DGVEGLVHYTEISYKGPVN PSKIYQEGDQV-SVKAIAYDEEKKRLSLSIKATVDD--PWREI-ENELEVGDAINVTVSNVEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKHPGEYLKSGQEIDVEVIEIDTKKRRL-RVSLKKL-------LEKPFEQFMK THKEGDVIKGAVATLTDFGAFIR------IGAIDGLLHNEDAFWEK--NGKCKEVMKEGDEVEVKIVKIDKD KERVSLSRKSLIASP--AE-DF---AKNHQIDDSVIGKIRD-IKDFGVFINL---E----DG--IDALIRIE DLA-----------PLKKEELNIGDEIEGVISLIDKENNKIRVSVRRLER--------KKEKESMKAFN--- -------------------SDDKMTLGDILKD---QI----------------------------------- ------------------------------------------------------------------------ ------------ >YP_072579/1-551 ribosomal protein S1 [Borrelia garinii PBi]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------MENQKDLQE-NY----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------KVL--------ER-- ------------------------------------------------------------------------ --------------------------------------------VE-L----------------G--SRVSG TVINI-M--KDY--VLV-DI--G-Y----------------KSEGF-IKIEEF-------ENVP----KIGD KLEAIVV-RIG--------GEL----GLI-----LSVEKL-------DSLNFQDKVDEYIQNKK---VIKGK VLA--ELAN-GYK-IQINENVSGFMPFYLSSKS-----KDEKLKRGLIVEFYILEAS-----ESDGLRLILD RRTLERERDLAKRIELVSSYNEEDVVD----GVVDR-ITEYGAIVKI-K----NFVTGILHKRNIAFNQVEN IEDFVRVGDKL-KLKIIKINLQTGKMELSLKALKAN--PWDSV-DIKYKIDSIVKGKVVKILPFGAVIE-LD SELSGFLHISNF--SWIRVIKSPQELIKLGQMVEVKILEVDKENQKI-SLGIKQI-------NENPWERLTE KYPIGKVIQGVVTNITKTGAFVN-----IEEGIDAYVSKFDISWLE--EIDPEEYFKIGDLVNGKVLEVDRR KRNVRLGIKQLEESP--WE-DF---SKSYKKGDAIEVEIVE-KKSKGFQVRV-------YNK--IMGFISKI QLGDTKESSL-----ETFEKLNIGDKLKVVITSIDSKDRSVLLSYREYEN--------QKSREEISSYL--- --------------FKGNDEESYKPFESLLKRDE-------------------------------------- ------------------------------------------------------------------------ ------------ >YP_709568/1-551 ribosomal protein S1 [Borrelia afzelii PKo]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------MENQKDLQE-NY----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------KVL--------ER-- ------------------------------------------------------------------------ --------------------------------------------VE-L----------------G--SRVSG TIVNI-M--KDY--VLV-DV--G-Y----------------KSEGF-IKIEEF-------ENVP----KIGD KLEAIVV-RIG--------GEL----GLI-----LSVEKL-------DSLNFQDKVNEYIQNKK---VIKGK VLV--ELSN-GYK-IQINENVSGFMPFYLSSKS-----KDEKLKRGSIVEFYILEAS-----ETDGLRLILD RRTLERERELAKRIELVSSYNEEDVVD----GMVDR-ITEYGAIIKI-K----NFVTGILHKRNIAFNQVEN IEDFIRVGDKL-KLKIIKINPQTGKMELSLKALKAN--PWDSV-DVKYKIDSIVKGKVVKILPFGAVIE-LD SELSGFLHISNF--SWIKVVKSPQELIKLGQMVEVKILEIDKENQKI-SLGIKQI-------NENPWERLTE KYPIGKVIQGVVTNITKTGAFVN-----IEEGIDAYVSKFDISWLE--EIDPEEYFKIGDLVNGKVLEVDRR KRNVRLGIKQLEESP--WE-DF---SKSYKKGDAIEVEIVE-KKSKGFQVRV-------Y--NKIMGFISKI QLGDTKESSL-----ETFEKLSIGDKLKVVITNIDSKDKSVLLSYREYEN--------QKSREEISSYL--- --------------FKGNDEESYKPFENLLKRDE-------------------------------------- ------------------------------------------------------------------------ ------------ >NP_212261/1-553 ribosomal protein S1 (rpsA) [Borrelia burgdorferi B31]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MRMENQKDLQE-NY----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------KVL--------ER-- ------------------------------------------------------------------------ --------------------------------------------VE-L----------------G--SRVSG TVVNI-M--KDY--VLV-DI--G-Y----------------KSEGF-IKIEEF-------ENVP----QVGD RLEAIVV-RIG--------GEL----GLI-----LSVEKL-------NSLNFQDKVYEYIQNKK---IIKGK VLV--ELPN-GYK-IQINENVSGFMPFYLSSKS-----KDEKLKRGSVVEFYILEAS-----EADGLRLILD RRTLEKERDLAKRIELVSSYNEEDVVD----GVVER-ITEYGAIVKI-K----NFVTGILHKRNIAFNQVEN VEDFVRVGDKL-KLKIIKINPQTGKMELSLKALKAN--PWDSV-DVKYKIDSIVKGKVVKILPFGAVIE-LD SELSGFLHISNF--SWIRVVKSPQELIKLGQIVEVKILEIDKENQKI-SLGIKQI-------NENPWERLTE KYPIGRVVQGVVTNITKTGAFVN-----IEEGIDAYVSKFDISWLE--EIDPEEYFKIGDLVNGKVLEVDKR KRNVRLGIKQLEESP--WE-DF---SKSYKKGDTIEVEIVE-KKSKGFQVRV-------Y--NKIMGFISKI QLGDTKESSL-----ETFEKLNVGDKLKVVITSIDSKDKSVLLSYREYEN--------QRSREEISSYL--- --------------FKGNDEESYKPFENLLKRDE-------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01312028/1-399 RNA binding S1 [Desulfuromonas acetoxidans DSM 684]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------MNEEPTDLQDDMEEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AML---EES--MG-- ---------------------------GSQR----------------------------------------- --------------------------------------------LD-I----------------G--QKTEA TILQI-G--KDW--VFL-DV--G-Q----------------KGEGV-LDVREL---QNDEGELS--V-EVGD TIEAFFM---S--------RKG----GELR----FTTKIG-------GGRSGHEQLEEAWRSGI---PVDGR IEK--EIKG-GYE-IMLPGNVRSFCPYSQIGLRRQ---DNPEELIGQSFQVKISQFS-----EQGR-NIVVS RRVLLEEQRQSQAESLRETLKEGMRVT----AEVTS-IREFGAFVDI------GGIEGLLPISEVAYSRVED LNEVLHVGQSL-ELVVKSLDWKNNKFSFSLRDTLAD--PWQNV-ADNFPVGSEHTGKVSRLAQFGAFVT-LE EGIDGLIHISKL--GEGRRINHPREVLKEGQELAVTIEKIDEEQKRI-SL---------------------- ----------------------------VPAGVA--VEATETSWSD-------------------------- --------------------SL-------------------------------------------------- --------------SSGSGMGSFGELLKASQDKKKRKKK--------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01291117/1-410 RNA binding S1 [delta proteobacterium MLMS-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MS-GF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EQE--GV-- ---------------------------GGQQ----------------------------------------- --------------------------------------------LE-P----------------G--RKIKA RVVEV-G--REW--IFI-DL--G-G----------------KSEGS-VAKAEF---TDPEGNCT--V-AAGD ELEVFFL---A--------DKK----NEKI----FTTKVG-------GA-AAQAHLEEAFHGKV---PVEGT VES--ETKG-GFL-IRIGGSSRAFCPYSQMDLRRA---ANPEEYLGQSFSFLIMEFR-----EGGK-NILLS RRQLLEQERQELKEQLRQSLKVGDLVT----GTVTS-VRDFGAFVDI------GGIEGLIPISEIGWGRVED IHSHLEPGRQV-EVAVKSLDWDKDRYSLSLKDTLPD--PWEQA-AVSFPEGSTQRGRVARLTDFGAFVT-LA PGVDGLVHISKL--GAGRRLNHPREVVQVGDELEVRVEAVDVEQKRI-SLA-----------VAPPTGSAEP ETPDAIPADAPLAAATDKRPAAG------------------------------------------------- ----------------------------------------------------------------DQGGQRPA AA------------KSQPAMGTLGELLQAKMQDKEGKK---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01286991/1-410 RNA binding S1 [delta proteobacterium MLMS-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MS-GF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EQE--GV-- ---------------------------GGQQ----------------------------------------- --------------------------------------------LE-P----------------G--RKIKA RVVEV-G--REW--IFI-DL--G-G----------------KSEGS-VAKAEF---TDPEGNCT--V-AAGD ELEVFFL---A--------DKK----NEKI----FTTKVG-------GA-AAQAHLEEAFHGKV---PVEGT VES--ETKG-GFL-IRIGGSSRAFCPYSQMDLRRA---ANPEEYLGQSFSFLIMEFR-----EGGK-NILLS RRQLLEQERQELKEQLRQSLKVGDLVT----GTVTS-VRDFGAFVDI------GGIEGLIPISEIGWGRVED IHSHLEPGRQV-EVAVKSLDWEKDRYSLSLKDTLPD--PWEQA-AVSFPEGSTQRGRVARLTDFGAFVT-LA PGVDGLVHISKL--GAGRRLNHPREVVQVGDELEVRVEAVDVEQKRI-SLAVAPP----------------- --------TGSAEPETPYAIPAD-----------------------------------------APLAAATD KR-----------------------PAAGDQGGQRPAAAKS------------------------------- ----------------QPAMGTLGELLQAKMQDKEGKK---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_731196/1-401 Ribosomal protein S1 [Synechococcus sp. CC9311]. ------------------------------------------------------------------------ ------------------------------------------------------MHISRKDEQDRLHREAEE ARAAADAAMARAVELEKAAQRAQNTTAKPPMAPTSTAKPSAVDDDDVRFGTD-EF----------------- ------------------------------------------------------------------------ --------------------------------------------SGMSMA-------DLLGPSDSNGKSS-- ---------------KSIPRPAKTSNRSVDDFD--------------------------------------- --------------------------------------------FD-EGAFLAALDANEPVGTTG--EVVTG TVIGM-E--SDG--VYV-DI--G-G----------------KAPGF-MPKNEC--GLGVITNLKERF-PKGL EIEVLVT-REQ--------NAD----GMVT----ISCRAL-------ALRQSWDKVKQLEKDGR---VSQVK VTG--FNRG-GVT-CDLE-GLRGFIPRSQLQDG-----ENHETLVGKTLGVAFLEVN-----SETR-KLVLS EKRAATAAR-------FSELEIGQLVE----GHVAA-IKPYGLFVDL------GGISGLLHQSAITGGSMRS MREIFDQGDAV-KALITELDPGRGRIALNTAMLEGQ------------------------------------ ----------------------PGELLVEKDKVMAEATDRANRARNV----LKQQ----------------- ------------------------------------------------------------------------ ------------------------------------------EQSAG------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_170758/1-295 nucleic acid binding protein [Synechococcus elongatus PCC 6301]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MSPSAANTPSYDDF----------------- ------------------------------------------------------------------------ ---------------------------------------------------------ALA---LEAQSLD-- ------------------------------------------------------------------------ --------------------------------------------SQ-K----------------G--QLVRG KVCEY-S--TDG--AYI-DI--G-G----------------KAPAF-LPKREA--ALHAVLDLEAHL-PKDE ELEFLVI-RDQ--------NED----GQVT----VSLRAL-------ALEQAWTRVAELQEGGQ---TVQVK VTG--SNKG-GVT-ADLE-GLRAFIPRSHLNEK-----EDLDSLKGKTLTVAFLEVN-----RADK-KLVLS ERQ-------AARTALVREIEVGQLIN----GKVTG-LKPFGVFVDL------GGATALLPINQISQKFVAD VGAIFKIGDPI-QALVVAIDNTKGRISLSTKVLENH------------------------------------ ----------------------PGEILENVAELQASAADRAERARKQ------------------------- ----------------------------LESQ---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_477091/1-304 putative ribosomal protein S1 [Synechococcus sp. JA-2-3B'a(2-13)]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------MTVRSSRSQAADTFSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------QAL---DKQN-LS-- ------------------------------------------------------------------------ --------------------------------------------FQ-P----------------G--QVVQG RIFQH-Q--NDG--ALV-DI--G-G----------------KSPAF-LPLKEA--GIRPGEDLSALF-PLKT EAEFLIL--RE--------DAE----GQIV----LSARRL-------RLKRLWEELAQKQANGQ---TVTVP VIA--TNKG-GVV-VDVQ-GLRGFIPRSHLSQR-----EGLEELVGQSLTASFIEVN-----PEAN-KLVLS QRAAVKSEN-------LSRYTSGQVVE----GKVSG-LKPFGVFVDL-E----EGVTGLLHIKQVSQSFVAS LPDLFKPGQRI-KAVVIDVDEAKGRMALSLRVLEKH--PGEVL----------------------------- ------------------------------EQLDRVMEEAEERAGKL------------------------- -----------------------------------------------KGR---------------------- ------------------------------------------ITSDGQVI---------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_474673/1-304 putative ribosomal protein S1 [Synechococcus sp. JA-3-3Ab]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------MTFRSPRSQAADTFSSE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KAL----EAQSLD-- ------------------------------------------------------------------------ --------------------------------------------FR-P----------------G--QVVRG RIFQH-Q--NDG--ALV-DI--G-G----------------KSPAF-LPLKEA--GIRSGEDLSELF-PLKS EADFLIL--RE--------DSE----GQIV----LSARRL-------RLKRLWEELAEKQTNGQ---TVTAL VIG--TNKG-GVL-VDVQ-GLRGFIPRSHLNQR-----ENLEELVGQSLTASLLEVN-----PAAN-KLVLS QRV-------ARQAESLGIYTTGQVVR----GKVSA-LKPFGVFVEL-E----EGGSGLLPIKQVSQSFVAS LSDLFQPGQPL-KAVVIDVDEAKGRVALSLRVLEKY--P--------------------------------- -----------------------------GEVLEQLALITEEAEERA------------------------- ------------------------------------------------------------------------ ------------------------------------GKLKGRITSEGKVI---------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01619747/1-295 RNA binding S1 [Lyngbya sp. PCC 8106]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MNTK-------NTSFSLD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------RALE--QHD--YD-- ------------------------------------------------------------------------ --------------------------------------------LQ-K----------------G--QVVRG QVFEY-T--SDG--VYI-DILGG------------------KSPGF-LPRKEA--SLADVEDLSEIL-PLQE EREFLVI-REQ--------NAE----GQVL----LSIRQL-------ELEKVWDRLNESQQQAQ---SFQVR VTG--MNRG-GVT-VDFD-SLRGFIPRSHLSEK-----EDLNSLIDQLLTVHILELD-----RDRN-KLVFS QRLASESVS-------FGQLEVGQLIE----GKVSS-VKPFGVFVDL------DGVTGLIHIKEVSQKYIES LPTLFPVGQAV-KALVIDLEEGRRRVSLSTRLLENY--PGEIV--EKFPE---------------------- --------------------------------------VMDSAEARA------------------------- ------------------------------------------------------------------------ ------------------------------------------ERAKKLIIAS-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_722182/1-304 RNA binding S1 [Trichodesmium erythraeum IMS101]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MNSESISSQGSKQSFTMD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KALEQPQYN--YE-- ------------------------------------------------------------------------ --------------------------------------------FK-K----------------G--QIVTG KVNSY-E--SEG--IYV-DV--G-G----------------KSLAL-LPFPEA--SLGDIEDLSEAL-PLQQ EREFLII-REQ--------DAD----GEVL----LSIKQL-------EINQIWERLAELEAGGQ---SFQVR VIG--TNKG-GVT-VDIQ-SLRGFVPRSHLLAR-----DNLESLIDQVLTVNFLELD-----QEKK-KIVMS QRLATQSAG-------FSKLAVGQLLE----GKVVG-VKPFGVFVDL------EGLTGLLHITQVSQKRVDS LSTIFSQGNLV-KAMIVDLDEGRKRISLSTKVLENY--PGEML----------------------------- ------------------------------EKIDEVMESADARAERA-RKALPQL----------------- ------------------------------------------------------------------------ -------------------------------------------------------Q---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_324232/1-302 RNA binding S1 [Anabaena variabilis ATCC 29413]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MNSESKLSQKANSSFTMD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KAL----ENHDYQ-- ------------------------------------------------------------------------ --------------------------------------------FQ-K----------------G--QVVYG KVFQL-D--PDG--AYV-DI--G-G----------------KSSAY-IPRDEA--SLRAVNDLAAVL-PLHE ELEFIII-REQ--------DAE----GQVT----LSRRQL-------EINHIWEKLAQMKENSQ---PVDVK VTG--VNKG-GVT-VDVQ-SLRGFIPRSHLTER-----DNLEALKGHTLTAGFLEVD-----RNNK-KLVLS QRLV-------TRSSNFNQLEIGQLVE----GKITG-IKPFGVFVDL------NGLSALLHIKQVSQKFIES LEKVFQPGQTI-KAIVIDLDQGKGRVAISTRALENF--PGEVL---------------------ENFEE-VM ASAEARAH---------------------------------RAANKM-SEGV-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_485121/1-305 30S ribosomal protein S1 [Nostoc sp. PCC 7120]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MNSESKLSQKANSSFTMD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KAL----ENHDYQ-- ------------------------------------------------------------------------ --------------------------------------------FQ-K----------------G--QVVYG KVFQL-D--PDG--AYV-DI--G-G----------------KSSAY-IPRDEA--SLRAVNDLAAVL-PLHE ELEFIII-REQ--------DAE----GQVT----LSRRQL-------EINHIWEKLAQMKENSQ---PVDVK VTG--VNKG-GVT-VDVQ-SLRGFIPRSHLTER-----DNLEALKGHTLTAGFLEVD-----RNNK-KLVLS QRLV-------TRSSNFNQLEIGQLVE----GKITG-IKPFGVFVDL------NGLSALLHIKQVSQKFIES LEKVFQPGQTI-KAIVIDLDQGKGRVAISTRALENF--PGEVL----------------------------- ENFEEVMASAEA--------------------------RANRAANKM------------------------- ----------------------------NEGGVGV------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00107914/1-300 COG0539: Ribosomal protein S1 [Nostoc punctiforme PCC 73102]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MNSESKLSQTANSSFTMD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KAL----EKHDYQ-- ------------------------------------------------------------------------ --------------------------------------------FQ-K----------------G--QVVHG KVFQL-D--HDG--AYV-DI--G-G----------------KSSAF-LPRDEA--SLRAVTDLSEVL-PLQE EMQFLII-RDQ--------DAE----GQVT----LSRKQL-------EIQHIWERLAEMQENAQ---TVQVR VMG--VNKG-GVT-VDIL-SLRGFIPRSHLAER-----DNLDALKGQNLTVGFLEIN-----KNTN-KLILS QRL-------ATRSSNFSLLELGQLVE----GKVTG-IKPFGVFVDL------NGMGALLHIKQVSQKFIDS LEKVFKVGQPI-KAVIIDLDEGKGRVALSTRVLENF--PGEVL----------------------------- ENMDEVMASAEA--RANRANNKAAE----------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01632384/1-284 30S ribosomal protein S1 [Nodularia spumigena CCY9414]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KAL----EVHDYQ-- ------------------------------------------------------------------------ --------------------------------------------FQ-K----------------G--QVVRG KVFQL-D--PNG--AYV-DI--G-G----------------KSSAF-LPREEA--SLRAVTDLSEVL-PLQE ELEFLII-RDQ--------DAE----GQVT----LSRKQL-------EIQQVWERLTEMNEGGQ---TVQVR VTG--VNKG-GVT-VDIL-SLRGFIPRSHLAER-----DNLEALKGQSLTVAFLEIN-----RNTN-KLILS QRLA-------TRSSSFSLLQLNQLVE----GRVTG-IKPFGIFVDL------DGLSALLHIKQVSQKYIES LEKVFQIGQTI-KAVIIDLDEGKGRVAISTRVLENF--PGEML----------------------------- ENFDEVMASAEA--RANRATNKPAE----------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00516127/1-313 RNA binding S1 [Crocosphaera watsonii WH 8501]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------MSIYLPLTIMTSDSAAPKGSQISFSMD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------T-------QAL---DDYD-YK-- ------------------------------------------------------------------------ --------------------------------------------CE-K----------------G--QVVRG KVIQH-S--DDG--AYV-DI--G-G----------------KSAGF-VPINEV--DLESRPDLAEIL-PIDE EKEFIVI-SEQ--------NAD----GQVK----LSRRQL-------QLKEAWENVEEIAEMGH---SVQMR VTR--TNKG-GVV-GEVE-GLQGFIPRSHLMEK-----EDLNGLVGQLLTATFLEVN-----QSTN-KLVLS QRRAIAAAR-------IDKLEVGQLVS----GKVAR-IQPYGIFVDF------EGVSGLLHITQVSGSRVDD LNHVFKYNQEI-KVMILSIDEYKNRIALSTKILENH--PGEII----------------------------- ENLEEVMKTADA--R------------------------VEQAREKM------------------------- -----------------------------------------------------------------------E KE---------------------------------------------------------------------- ----------------------------------------------------------EQN----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_441548/1-305 30S ribosomal protein S1 [Synechocystis sp. PCC 6803]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MPSSSNSAAFSLD-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------KALD--KHD--YH-- ------------------------------------------------------------------------ --------------------------------------------AE-K----------------G--QTVHG KICQH-A--NEG--VYV-DF--G-G----------------KSPGF-VPVQEL--GLRPHAEIEDSF-PLDS AWDFLVT-SEQ--------NDE----GQVR----LSRRQL-------QIQQSWENLAELEESGK---TLEMV VTG--TNKG-GVV-GDVE-GLRGFIPRSHLMHK-----DNMDALVGQVLKAHILEAN-----QDNN-KLVLT QRRIQQAES-------MGKIAAGNIYE----GKVAK-IQPYGVFVEI------EGVTGLLHVSQVSGTRVDS LNTLFAFGQAI-SVYVQEIDEYKNRISLSTRILETY--P--------------------------------- -----------------------------GELVEKFDEMMADAPNRL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------PLVQSKQNLGDKQEQL----------------------------EKS----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_063561/1-265 30S ribosomal protein S1 [Gracilaria tenuistipitata var. liui]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------MQDISSIGFSEK-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------AILN--QYS--YN-- ------------------------------------------------------------------------ --------------------------------------------LH-P----------------G--DIIAG TVFHK-E--AKG--FLV-DV--G-V----------------NIAGY-LPIDEV--LLGSGYSNDDLMYLVNN TREFFIF-AYN--------KER----QQLL----LSIKRL-------DYIKAWKRIKQLETEEI---ILHVP LIN--FNKG-GIL-TALE-GLHSFIPRSHLILF-----NAYESMVRSYLPCKILLVD-----EKTN-KIILS HKLALLYLY-------SDLLRVGRLVY----GQIIQ-FKQYGIFLNI------YGIPALLHISEIGYEYIDN IDCVFAIGHKI-KVKIIHIDMKQARLSVSRREVV-------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_053955/1-263 ribosomal protein S1 [Porphyra purpurea]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MTKNNESFTHR-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AVLQ--KYK--YD-- ------------------------------------------------------------------------ --------------------------------------------LN-L----------------G--DIVAG TIFSF-E--LNG--VLV-DI--G-T----------------PVSAY-LPIQEV--SSNQELNNFNSL-NIND TREFFLL-DYN--------VES----RQLI----LSIRRL-------EYIRAWKRIRQLLAEDS---LLDVR IKG--FNKG-GMI-VNLE-GISGFVPNSHLNNF-----SKNTSSTNKFIKLKLLNVE-----EKSN-NLILS HRRALIAQA-------SSNLIVGNIIE----GVINQ-ITPYGLFIKA------GNLKGLVHISEINVKQVER IPSQFKIGDTI-KAVIIHVDKKQGRLSLSMKHLK-------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_537026/1-227 30S ribosomal protein S1 [Porphyra yezoensis]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MTKNNEGFTHR-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AVLQ--KYK--YD-- ------------------------------------------------------------------------ --------------------------------------------LN-L----------------G--DIVAG TIFSF-E--LNG--VLV-DI--G-T----------------PISAY-LPIQEV--SSNQDLNNFTSL-NIND TREFFLL-DYN--------IQS----KQLI----LSIRRL-------EYIRAWKRIRQLLAEDS---LLNVM IKG--FNKG-GMI-INLE-GISGFVPNSHLGNF-----QKSEQFNNKFIKLKLLNVE-----EKSN-NLILS HRRALISQA-------SSNLIVGNIIE----GIINQ-ITPYGLFIKV------GNLKGLVHISEINIKN--- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_923933/1-320 30S ribosomal protein S1 [Gloeobacter violaceus PCC 7421]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MELGTPAPTATDIGFTRE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------RLLS--QYD--YR-- ------------------------------------------------------------------------ --------------------------------------------FN-P----------------G--DIVKG TVFSL-E--PRG--ALI-DI--G-A----------------KTAAY-LPLQEM--SINRVDDPTEVL-GEGD TLDFFIL-SDE--------NEE----GQLT----LSIRRI-------EYMKAWERVRKLQTEDQ---TVRAK IFA--VNRG-GAL-VRIE-GLRGFIPGSHLSTR-----EPKEELIGEELPLKFLEVD-----EERN-RLVLS HRRALVERR-------MNKLEAGQVVI----GRVRG-IKPYGAFIDI------GGVSGLLHISEISHDHIET PHSVFNVGDEV-KVMVIDLDAERGRISLSTKQLEET--P-------------------------GAMTQ--- -----------------------------DKQAVFDNAEVMAEKYRA-RMAAEAA----------------- ------------------------------------------------GSEPVEEFD-----EAVVAAID-- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_724104/1-390 RNA binding S1 [Trichodesmium erythraeum IMS101]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MTNLKTPAKEVGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DIVAG TVFSL-E--PRG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRVENPEEVL-QSNE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSQ VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KPKEDLLNEELPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNRLEVGEVVI----GAVRG-IKPYGAFIDI------GGVSGLLHISEISHDHIET PSSVLKVNDEL-KVMIIDLDADRGRISLSTKQLEPE--PGAMV-KNPQMVYDQAEEMAAKFREK---MM-AP QGGETAVETPEV--GVIAEATEAPEGVATAEALEAPEEVATSEALKV------------------------- ---------------------------------------------------------PEEVITSEALEVPEE L----------------------------------------------------------------------- --------------ATEASQKTEETETTVEIAIVDEETSAAALE---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_478555/1-322 ribosomal protein S1 [Synechococcus sp. JA-2-3B'a(2-13)]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------MSRFTAADVGFTTE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--EIVAG TVFSV-E--PRG--ALI-DI--G-A----------------KTAAF-LPLQEM--SISRLEDPHEML-QPGE TREFFIL-TEE--------NEE----GQLT----LSIRRI-------EYMRAWERVRQLQKEDA---TVRST IFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KPKEELVGEELPLKFLEVD-----EDRN-RLVLS HRRALVERK-------MNKLEVGEVVV----GTVRG-IKPYGAFIDI------GGVSGLLHISEISHDHVDT PHSVFNVNDEV-KVMIIDLDAERGRISLSTKQLEPN--PGDMI-RDPKLVYEKAEEMAAKYRE-----Q-LL AAKQG------------QAAEAPPEVVE--EELEYAATAVE------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_440890/1-328 30S ribosomal protein S1 [Synechocystis sp. PCC 6803]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVSQ-TSTATIGFTLE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DIVAG TVFSM-E--SRG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRVDDPEEVL-QPNE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSN VFA--TNRG-GAL-VRIE-GLRGFIPGSHISAR-----EAKEDLVGEDLPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNGLEVAQVVV----GSVRG-IKPYGAFIDI------GGVSGLLHISEISHDHIDT PHSVFNVNDEI-KVMIIDLDAERGRISLSTKQLEPE--PGAML------------------KDRDLVNE-MA DEMAEIFRQKRL--AEAQG---------IPYEPPTSVDDTDDEEDE--SLAVSAV----------------- ------------------------------------------------------------------------ ------------------------------------------------------------DE---------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00516537/1-345 RNA binding S1 [Crocosphaera watsonii WH 8501]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVTQNTTTKDIGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DIVPG TVFSM-E--PRG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRVDDPDEVL-QANE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSD VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----EAKEDLVGEQLPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNGLEVGQVVI----GSVRG-IKPYGAFIDI------GGVSGLLHISEISHDHIDT PHSVFGVNDEL-KVMIIDLDAERGRISLSTKQLEPE------------------------------------ ----------------------AGDMLKNRDLVFEKAEEMAEKYRQK-LLAEAQG-------KEAPTEEVLE DVPSASETEEPQEELAA------------------------------------------------------- -------------------------TATADTDDTVATATEE------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01623862/1-414 30S ribosomal protein S1 [Lyngbya sp. PCC 8106]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MINQKTNQRDVGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--QYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DVVAG TVFSL-E--PRG--ALI-DI--G-A----------------KTAAY-IPLQEM--SINRVESPDEVL-QSNE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSQ VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KPKEELVSEELPLKFLEVD-----EDRN-RLVLS HRRALVERK-------MNRLEVGEVVI----GTVRG-IKPYGAFIDI------GGVSGLLHISEISHDHIDT PHSVFNVNDEV-KVMIIDLDADRGRISLSTKQLEPE--PGAMV---KNPELVYEKAEEMAAKFREKMLA-EQ QGTDAPTGEAEV--EEADIPSAT-----ENDEVEEVVADTEVAETTTAEVKEAEP-------EAEPEAEPEA ELEAEPEAELEVEPEAE-------------------------------------------------LEVEPE AEPEAEPEAELEAEP----------EAEPEK------EEEE------------------------------- ------------------------------------------------------------------------ ------------------------EASAVAES---------------------------------------- ------------------------------------------------------------------------ ------------ >YP_171546/1-307 30S ribosomal protein S1 [Synechococcus elongatus PCC 6301]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVTQDIPAVDIGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--QYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FN-P----------------G--DTVVG TVFNL-E--PRG--ALI-DI--G-A----------------KTAAF-LPVQEM--SINRVESPEEVL-QPSE MREFFIL-SDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQTEDA---TVRSE VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KAKEDLVGEELPLKFLEVD-----EDRN-RLVLS HRRALVERK-------MNRLEVGEVVV----GAVRG-IKPYGAFIDI------GGVSGLLHISEISHDHIET PHSVFNVNDEV-KVMIIDLDAERGRISLSTKQLEPE--PGDMV----------------------------- --------------------RNPEVVYE-------------------------------------------- -----------------------------------------------KAEEMAAQYREK------------- -------------------------LKQQAEGLVVTE----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_682836/1-330 30S ribosomal protein S1 [Thermosynechococcus elongatus BP-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVNQEKT-LDVGFTHA-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--RYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FN-P----------------G--DIVAG TVFSI-E--PKG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRIESPEEVL-QPNE TREFFIL-ADE--------NEE----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSQ VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----VNKEELVGEELPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNKLEVGEVVV----GTVRG-IKPYGAFIDI------GGVSGLLHISEISHDHIDT PHSVFNVNDQV-KVMIIDLDAERGRISLSTKQLEPE--PGDMV----------------------------- --------------------KNPQLVYEKAEEMA------ERYRQQL-LQQQQQA----------------- -----------------------------------------------AGETPEE------------------ ------GMEDIPEAT---------------------------------------------ED---------- --------------DSPAPILQEA------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01628186/1-383 30S ribosomal protein S1 [Nodularia spumigena CCY9414]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVNQNLTATEIGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DIVPG TVFSI-E--PRG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRVDAPEEVL-QSNE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSG VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KPKEELVGEELPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNRLEVGEVVI----GTVRG-IKPYGAFIDI------GGVSGLLHISEISHEHIDT PHSVFNVNDEV-KVMIIDLDAERGRISLSTKQLEPE--PGDMI-KNRDLVYDKAEEMAAKYRE--QMLA-KQ QGI-------------TAAPAEAEEVVGAEEAVEA------------------------------------- -----------------------------------------------TTEEEIPAATETQEEVSAVAATEEE TPAASEEVSAVAATE--------------------------------------------------------- --------------EEVPAATESEEEIPATVE--------------------------QEG----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00110690/1-375 COG0539: Ribosomal protein S1 [Nostoc punctiforme PCC 73102]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVNQNLTATEIGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DVVPG TVFSI-E--PRG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRVDSPEEVL-QSNE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSG VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KPKEELVGEELPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNRLEVGEVVI----GTVRG-IKPYGAFIDI------GGVSGLLHISEISHEHIDT PHSVFNVNDEV-KVMIIDLDAERGRISLSTKQLEPE--PGDMI-KNRDLVYDKAEEMAAKYRE--QLLA-KQ QGATAAPAAPAD--VLAEEDIPPAT--ELEDEIP-------------------------------------- -----------------------------------------------PAAELEEEIPPAAEIEEVTPVVAEI QEKIPATTETEEEIP--AAIEE-------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_484180/1-343 30S ribosomal protein S1 [Nostoc sp. PCC 7120]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVNQNLTATEIGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DVVPG TVFSI-E--PRG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRVDAPEEVL-QSNE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSG VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KPKEELVGEELPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNRLEVGEVVI----GTVRG-IKPYGAFIDI------GGVSGLLHISEISHEHIDT PHSVFNVNDEV-KVMIIDLDAERGRISLSTKQLEPE--PGDMI-KNRDLVYDKAEEMAAKYREQ------LL AKQQGITLPAEGAEDLIEEEIPPATEDAVAEEEIVAVEEI--------PAAIEE------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_322023/1-343 30S ribosomal protein S1 [Anabaena variabilis ATCC 29413]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MVNQNLTATEIGFTHE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALLD--KYD--YH-- ------------------------------------------------------------------------ --------------------------------------------FS-P----------------G--DVVPG TVFSI-E--PRG--ALI-DI--G-A----------------KTAAY-IPIQEM--SINRVDAPEEVL-QSNE TREFFIL-TDE--------NED----GQLT----LSIRRI-------EYMRAWERVRQLQAEDA---TVRSG VFA--TNRG-GAL-VRIE-GLRGFIPGSHISTR-----KPKEELVGEELPLKFLEVD-----EERN-RLVLS HRRALVERK-------MNRLEVGEVVI----GTVRG-IKPYGAFIDI------GGVSGLLHISEISHEHIDT PHSVFNVNDEV-KVMIIDLDAERGRISLSTKQLEPE--PGDMI-KNRDLVYDKAEEMAAKYREQ------LL AKQQGIALPAEG--A--------------EDLIEEEIPSATED----------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------AVAEEEISAVEEIPAAIED--------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_711441/1-560 Ribosomal protein S1 [Leptospira interrogans serovar Lai str. 56601]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MTNKEEKSTF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------EVFKQWEQS--IH-- ---------------------------EEPE----------------------------------------- --------------------------------------------LR-K----------------D--QVVEG KIVSV-D--NDY--VYV-AI-EG-L----------------KQEGR-IPRGDF-------DEAP----ERGN YVSAIVK-RKE--------SQD----SGCI----LSKKEA-------DQRKGWEIVKEAFKNGY---QVTGR LVN--EIKGKGYI-VNVE-GVELFLPASQLSYKF----KEGETFKNKELEFKIIELN-----DRTR-SGVVS RKKLLDEVNEEKWDALLLKLKVGDKVK----AIVSK-IASFGVFCEV------DGVTGLLRQRDISYKKYAP FKQYFQVGQEV-ELVILELDKENNKLALGLKQLYED--PWVWA-ERSLEKEMVIRGTVTSLTKFGAFVE-LK EGLEGLIHTSEL--AWSKKPPQPKDILKKGQEVEALVLDIDFKNRRL-SLGLKQL-------QPNPWDQLGP EIRRGNVLEGVITGITKYGAFVE-----VENGIEGLIHISDITWDE-KVANPTSQLKKGDTVRYMILDVNLD AQRISCGLKQLMENP--YE-IF---RNEHPVGTIVEGKVKS-IKEFGIFVEV---A----PG--IEGLVHIS EV---PNGKE----VNLTELYKSDEIVKTAVIKVDVKNKKISLSIKDFDK--------ALEREEMSKYL--- ---------------KTSDAPSRESLGSFLNTSLR------------------------------------- ------------------------------------------------------------------------ ------------ >YP_798443/1-560 30S Ribosomal protein S1 [Leptospira borgpetersenii serovar Hardjo-bovis L550]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MTNKEEKSTF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------EVFKQWEQS--IH-- ---------------------------EEPE----------------------------------------- --------------------------------------------LRKD-------------------QVVEG KIVSV-D--NDY--VYV-AI-EG-L----------------KQEGR-IPRGDF-------DEAP----ERGN YVSAIVK-RKE--------SQD----SGCV----LSKKEA-------DQRKGWEIVKEAFKNGY---QVAGR LVN--EIKGKGYI-VNVE-GVELFLPVSQLSYKF----KEGETFKNKELEFKIIELN-----DRTR-SGVVS RKKLLDEVNEEKWDALLLKFKVGDKVK----SVVSK-IASFGVFCEV------DGVTGLLRQRDISYKKYAP FKQYFQIGQEV-ELVVLELDKENNKLALGLKQLYED--PWVWA-ERSLEKEMVIRGTVTSLTKFGAFVE-LK EGLEGLIHTSEL--AWSKKPPQPKDILKKGQEVEALVLDIDFKNKRL-SLGLKQL-------QPNPWDQLSP EVRRGNVLEGVITGITKYGAFVE-----VENGIEGLIHISDITWDE-KVSNPTSQLKKGDTVKYMILDVNLD AQRISCGLKQLMENP--YE-IF---RNEHPIGTIVEGKVKS-IKEFGIFVEV---A----PG--IEGLVHIS EV---PNGRE----VNLTELYKPEEAIKTAVIKVDVKNKKISLSIKDFDK--------ALEREEMSKYL--- ---------------KTSDTPSRESLGSFLNTSLR------------------------------------- ------------------------------------------------------------------------ ------------ >NP_787421/1-473 30S ribosomal protein S1 [Tropheryma whipplei str. Twist]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------MNMKVIDELSSE-DL----------------- ------------------------------------------------------------------------ ----------------------------------------------------------LLSEIDKT--VK-- ---------------------------S-------------------------------------------- --------------------------------------------FS-D----------------G--DIVVG TVVRV-Y--RDE--VLV-DV--G-Y----------------KTEGV-IPVKEL--SLRADVDPNELL-EVGS TVEALVF-QKE--------DSQ----GRLI----LSKKRA-------QYEKAWSDLEKIKDSDL---TVTGK VIE--IVRG-GLI-VDI--GLRGFLPASLIDIRRV---RDLSSYLGMEIEAKVLELD-----RQRN-NVVLS RRVLLEQNQSEARTSLFGNLHKGQVRK----GTVSS-IVSFGAFVDL------GGIDGLVHISEISWKHVTQ PSEVLKVGEEV-TVEILEVDSERHRVSLSLRATQED--PWQVF-AHDHAIGQIMPGVVTKVMNFGVFVR-LA EDVEGLAHVSEL---LDSSLESTEDVFSPGDEVFVKIVDIDIDSRRI-SLSLKQA----------------- --TAALTLDSKGFDPALYGMLAE------------------------YDDDGNYKYPEGFDPEANQWKEGFE EEKAR------------WEQGYAVARDVWHAHTVFVSEFQKKLEALSV------------------------ --------------SNAPEALPSAESVSA----IDSDTTNSPESAKGSEQ-D-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_789408/1-473 30S ribosomal protein S1 [Tropheryma whipplei TW08/27]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------MNMKVIDELSSE-DL----------------- ------------------------------------------------------------------------ ----------------------------------------------------------LLSEIDKT--VK-- ---------------------------S-------------------------------------------- --------------------------------------------FS-D----------------G--DIVVG TVVRV-Y--RDE--VLV-DV--G-Y----------------KTEGV-IPVKEL--SLRADVDPNELL-EVGS TVEALVF-QKE--------DSQ----GRLI----LSKKRA-------QYEKAWSDLEKIKDSDL---TVTGK VIE--IVRG-GLI-VDI--GLRGFLPASLIDIRRV---RDLSSYLGMEIEAKVLELD-----RQRN-NVVLS RRVLLEQNQSEARTSLFGNLHKGQVRK----GTVSS-IVSFGAFVDL------GGIDGLVHISEISWKHVTQ PSEVLKVGEEV-TVEILEVDSERHRVSLSLRATQED--PWQVF-AHDHAIGQIMPGVVTKVMNFGVFVR-LA EDVEGLAHVSEL---LDSSLESTEDVFSPGDEVFVKIVDIDIDSRRI-SLSLKQA----------------- --TAALTLDSKGFDPALYGMLAE------------------------YDDDGNYKYPEGFDPEANQWKEGFE EEKAR------------WEQGYAVARDVWHAHTVFVSEFQKKLEALSV------------------------ --------------SNAPETLPSAESVSA----IDSDTTNSPESAKGSEQ-D-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_696164/1-491 30S ribosomal protein S1 [Bifidobacterium longum NCC2705]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MAENNTEVT-----------------KVAINDIGTEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------I-------KAV---DST--IK-- ---------------------------N-------------------------------------------- --------------------------------------------FD-D----------------G--DLVEG TVVKI-D--HDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKKDVDPDEVV-EVGD TIEALVV-TKE--------DKE----GRLI----LSKKRA-------QYERAWGDIEKIKEADG---VVEGT VIE--AVKG-GLI-VDI--GLRGFLPASLVEMRRV---RDLSPYIGQKIKAKILELD-----KNRN-NVVLS RRQYLEETQSEVRETFLSQLKKGQIRE----GVVSS-IVNFGAFVDL------GGVDGLIHVSELSWKHIDH PSEVVKVGDKV-TVEVLDVDLDRERISLSLKATQED--PWQRF-ARTHVPGQIVKGKVTKIVQFGVFIS-VE DGIEGLVHISEL--A-NRHVENPETVVKPGETVFVKVIDVDLDRRRI-SLSLKQA--------NDSVDPASE DFDPA--IYGMPAEYDEQGNYK------YPEGFDPNTN----EWIA-GYEKQREEWESQYAAAHELWE---- -EHKEFVAKELENAA-----ES---AAADGQGPKEEKPVEE-----------------------TSNYSSA- --------------APTTGTLADSDQLAALRDQLLGK----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_909537/1-490 30S ribosomal protein S1 [Bifidobacterium adolescentis ATCC 15703]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MAENNNEVA-----------------KVAINDIGTEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------I-------KAV---DST--IK-- ---------------------------N-------------------------------------------- --------------------------------------------FD-D----------------G--DLVEG TVVKV-D--HDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKKDVDPDEVV-EVGD TIEALVV-TKE--------DKE----GRLI----LSKKRA-------QYERAWGDIEKIKEADG---VVEGT VIE--AVKG-GLI-VDI--GLRGFLPASLVEMRRV---RDLSPYIGQKIKAKILELD-----KNRN-NVVLS RRQYLEETQSEVRETFLSQLKKGQIRE----GVVSS-IVNFGAFVDL------GGVDGLIHVSELSWKHIDH PSEVVKVGDKV-TVEVLDVDLDRERISLSLKATQED--PWQRF-ARTHVPGQIVKGKVTKIVQFGVFIS-VE DGIEGLVHISEL--A-NRHVENPETVVKPGEEVFVKVIDVDLDRRRI-SLSLKQA--------NDSVDPASE DFDPA--LYGMPAEYDEQGNYK------YPEGFDPATNEWIAGYEK-QREEWESQYATAH---------DLW EQHKEFVAKELENAE----------ASAAEDGQAPKEEKVEEVSNYSSD----------------------- --------------NTSNGTLADSDQLAALRDQLLGK----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01130865/1-488 30S ribosomal protein S1 [marine actinobacterium PHSC20C1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTIATTDKA------------PK---QVAINDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---EKT--LK-- ---------------------------F-------------------------------------------- --------------------------------------------FN-D----------------G--DLIEG TVVKI-D--RDE--VLL-DV--G-Y----------------KTEGV-IPSREL--SIKHDVDPTEVV-NVGD TVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGDVELIKESDG---VVTGS VIE--VVKG-GLI-VDI--GLRGFLPASLIELRRV---RDLTPYLGQEIEAKILELD-----KNRN-NVVLS RRALLEETQSASRTSFLNNLAKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIEH ASEVVEVGQEV-TVEILEVDLERERVSLSLKATQED--PWQVF-ARTHAIGQVAPGKVTKLVPFGAFVR-VA DGIEGLVHISEL--S-GKHVELAEQVVSVGDEVFVKVIDIDLERRRI-SLSLKQA----------------- --NEGVDPEGTEFDPALYGMLTE------------YDDQGNYKYPD-GFDPETNEWKDGFESQREKWEQDYA AAQAR------------WE-QH---KKQVAAAAIQEESISS-APAGASSFSN-------------------- --------------EEAASAAGSGTLADDETLAALR--------------------------EKLSSNN--- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_062096/1-480 30S ribosomal protein S1 [Leifsonia xyli subsp. xyli str. CTCB07]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTTATTDKA------------PK---QVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---EKT--LK-- ---------------------------F-------------------------------------------- --------------------------------------------FN-D----------------G--DLIEG TVVKI-D--RDE--VLL-DV--G-Y----------------KTEGV-IPSREL--SIKHDIDPSEVV-DVGD TVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGDVEKIKDADG---VVTGT VIE--VVKG-GLI-VDI--GLRGFLPASLIELRRV---RDLTPYLGQEIEAKILELD-----KNRN-NVVLS RRALLEQTQSESRTTFLNNLYKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIEH ASEVVEVGQEV-TVEILEVDLDRERVSLSLKATQED--PWQVF-ARTHAIGQVAPGKVTKLVPFGAFVR-VA DGIEGLVHISEL--S-GKHVELAEQVVSVGEEVFVKVIDIDLERRRI-SLSLKQA----------------- --NEGVDPEGTEFDPALYGMVTE------------------------YDEQGNYKYPEGFDAETNEWKDGFD TQREEWEQQYAAAQA----------RWEAHKRQVAKGLEETSVDAGSASYSS---E---------------- --------------TGAGGTLADDESLAALREKLSSSN---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_872847/1-515 RNA binding S1 domain protein [Acidothermus cellulolyticus 11B]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTTATDVRP--------ETPEPPASSRIAVNDVGSTD-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------I-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPHEVV-KVGD RIEALVL-QKE--------DKD----GRLI----LSKKRA-------QYERAWGTIEQIKEADG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLAPYVGRKLEAKIIELD-----KNRN-NVVLS RRAYLEQTQSEVRQTFLTTLKKGQIRN----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGMPV-TVEVLDVDLDRERVSLSLKSTQED--PWQLF-ARTHSLGQVVPGKVTKLVPFGAFVR-VE DGIEGLVHISEL--S-DRHVEIPEQVVQVGDEIFVKIIDIDLERRRI-SLSLKQA-------LEGVESTSPE QFDP--TVYGMPASYDEHGNYI------YPEGFD----------------PETNQWLPGHEAQQAEWERQYA EARARFEAHRAQV------------AKMRQAQAQAEAEQATTSSDGGAAETP-------------------- --------------AEPSGSLAGDEQLAELRRKLAEDAVEQPAAADANPD--------EESKDPA------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_118107/1-487 30S ribosomal protein S1 [Nocardia farcinica IFM 10152]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MPTTVTSPQVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEELKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLHQLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGNEV-TVEVLDVDLDRERVSLSLKATQED--PWRQF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPDQVVAVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYSPEFDP SK------YGMADSYDEQGNYI------FPEGFDPETN----EWLE-------GYEKQRDEWESRYAEAERR HKMHTAQMEKMAADA-----AA---EAANGGGGNYSSESGA-QSSAGQS----------------------- --------------EPAGGSLASDAQLAALREKLSGNA---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_700965/1-494 30S ribosomal protein S1 [Rhodococcus sp. RHA1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSTTVTSPQVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEELKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLHQLQKGQVRK----GIVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGTEV-TVEVLDVDLDRERVSLSLKATQED--PWRQF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPDQVVGVNDDALVKVIDIDLERRRI-SLSLKQA-------NEDYNAEFDP SK------YGMADSYDEQGNYI------FPEGFDPETN----EWLE---------------------GFDKQ REE--------------WENRY---AEAERRHKMHTAQMEKTAADEAAEAAT---A--------AAGYSSES GAGDADVASA----ASTSSSESAGGSLASDAQLAALREKLSGNA---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >CAA86365/1-482 30S ribosomal protein S1 [Mycobacterium leprae]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MSIPAVPSPQIAVNDVGSSE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPAREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEALKEKDE---AVKGI VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLQKGAIRK----GVVSS-IVNFGCVCRS------GGVDGLVHVSELSWKHIDH PSEVVQVGNEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPDQVVAVGDDAMVKVIDIDLERRRI-SLSLKAD-----------QRGLHR GVRPGKVRYGPTATTSRA----------TTSSLEGF-------------DPDSNEWLEGFDTQRAEWEARYA EAERRYKMHTIQMEK--FA-------ATEEAGHGSSEQPPA------------------------------- --------------SSTPSAKATGGSLASDAQLAALREKLAGSA---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_301983/1-481 30S ribosomal protein S1 [Mycobacterium leprae TN]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MSIPAVPSPQIAVNDVGSSE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPAREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEALKEKDE---AVKGI VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLQKGAIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGNEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPDQVVAVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYIEEFDP AK------YGMADSYDEQGNYI------FPEGFD----------------PDSNEWLEGFDTQRAEWEARYA EAERRYKMHTIQMEK--FA-------ATEEAGHGSSEQPPA------------------------------- --------------SSTPSAKATGGSLASDAQLAALREKLAGSA---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_888124/1-479 30S ribosomal protein S1 [Mycobacterium smegmatis str. MC2 155]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPSVTSPQVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEELKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLQKGAIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--S-ERHVEVPDQVVQVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYTEEFDP SK------YGMADSYDEQGNYI------FPEGFDPETN----EWLE---------------------GFDKQ REE--------------WEARY---AEAERRHKMHTAQMEKFAAAEA------------------------- --------------EAANAPVSNGSSRSEESSGGTLASDAQLAALREKLA--------GNA----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01276846/1-479 RNA binding S1 [Mycobacterium sp. JLS]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPVATSPQVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEELKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLQKGAIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVTVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--S-ERHVEVPDQVVQVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYTEEFDP SK------YGMADSYDEQGNYI------FPEGFDSETN----EWLE---------------------GFEKQ REE--------------WESRY---AEAERRHKMHTAQMEKFAAAEA------------------------- --------------EEAARPVSNGSSRSEESTGGTLASDAQLAALREKLA--------GNA----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_954159/1-481 RNA binding S1 domain protein [Mycobacterium vanbaalenii PYR-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPSVTSPQVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEELKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLTKGAIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--S-ERHVEVPDQVVQVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYSEEFEA WK------YGMADSYDDQGNYI------FPEGFDADTN----EWLE-------GFEKQRDEWEARYAEAERR HKMHTAQMEKFAAAE--AE------EAARPTSSSSNGARSE------------------------------- --------------ESAGGSLASDAQLAALREKLAGNA---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01194787/1-481 RNA binding S1 [Mycobacterium flavescens PYR-GCK]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPSVTSPQVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEELKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLTKGAIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--S-ERHVEVPDQVVQVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYSEEFEA WK------YGMADSYDDQGNYI------FPEGFDADTN----EWLE-------GFEKQRDEWEARYAEAERR HKMHTAQMEKFAAAE----------AEEAAKPASSNGSSRSEESSGGGSL---------------------- --------------ASDAQLAALREKLAGNA----------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_905584/1-481 ribosomal protein S1 RpsA [Mycobacterium ulcerans Agy99]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPTVTSPQVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DQT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPAREL--SIKHDVDPNEVV-TVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEALKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLQKGTIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPDQVVAVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYTDEFDP AK------YGMADSYDDQGNYI------FPEGFD----------------PETNEWMEGFDTQRAEWEARYA EAERRHKMHTTQMEK--FA-AAEAAGHGDNGGGSSSSSSSE------------------------------- --------------KSAGGSLASDAQLAALREKLAGNG---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_960259/1-480 30S ribosomal protein S1 [Mycobacterium avium subsp. paratuberculosis K-10]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPAVTSPQVAVNDIGSSE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPAREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEALKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNQLQKGAIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPDQVVAVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYTEEFDP AK------YGMADSYDEQGNYI------FPEGFDPETN----EWLE-----------------------GFE KQRAE------------WEARY---AEAERRHKMHTAQMEKFAAAEAA------------------------ --------------GHAGGEQSPGNGAPAEKAGGSLASDAQLAALREKLA--------GNA----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_855309/1-481 30S ribosomal protein S1 [Mycobacterium bovis AF2122/97]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPTVTSPQVAVNDIGSSE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPAREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEALKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNNLQKGTIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL---AERHVEVPDQVVAVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYTEEFDP AK------YGMADSYDEQGNYI------FPEGFDAETN----EWLE-----------------------GFE KQRAE------------WEARY---AEAERRHKMHTAQMEKFAAAETA----------------GRGADDQS SA------------SSAPSEKTAGGSLASDAQLAALREKLAGSA---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_216146/1-481 30S ribosomal protein S1 [Mycobacterium tuberculosis H37Rv]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MPSPTVTSPQVAVNDIGSSE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DKT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPAREL--SIKHDVDPNEVV-SVGD EVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEALKEKDE---AVKGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLNNLQKGTIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVQVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWRHF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL---AERHVEVPDQVVAVGDDAMVKVIDIDLERRRI-SLSLKQA-------NEDYTEEFDP AK------YGMADSYDEQGNYI------FPEGFDAETN----EWLE-----------------------GFE KQRAE------------WEARY---AEAERRHKMHTAQMEKFAAAEAA----------------GRGADDQS SA------------SSAPSEKTAGGSLASDAQLAALREKLAGSA---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_250600/1-516 30S ribosomal protein S1 [Corynebacterium jeikeium K411]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------MVASKSRVCRTRVTVHLLFLFVSKDIQHMPTNNVPQVAINDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DST--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--HDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPGEVV-EVGD EIDALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEELKKNEE---PVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYIGQEIEAKIIELD-----KHRN-NVVLS RRAWLEQTQSEVRSEFLHQLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSQLSWKHIDH PSEVVAVGDEV-TVEVLDVDLDRERVSLSLKATQED--PWRVF-ARTHAIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPDQVVGVGQDAMVKVIDIDLERRRI-SLSLKQA-------DEDYTEEFDP SK------YGMADSYDEQGNYI------FPEGFDPETNEWLEGYDE--QRQAWEERYAESERRHRLHTAQIE RNRAAAAEAAANGEG-----GY---SSESQTESAPASSEAP-AQDAGTLA---------------------- -----SDEQL----AALREKLAGGE----------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >AAF64246/1-489 30S ribosomal protein S1 [Corynebacterium ammoniagenes]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MPTSNTPQVAINDIGTAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--HDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPDEVV-EVGD QIDALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGAIEELQAKEE---PVTGT VIE--VVKG-GLI-IDI--GLRGFLPASLVEMRRV---RDLEPYIGQELEAKIIELD-----KQRN-NVVLS RRAFLEQTQSEVRSEFLHQLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVTVGDEV-TVEVLDVDLDRERVSLSLKATQED--PWRVF-ARTHAVGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-QRHVEVPDQVVNVGEDVMVKVIDIDLERRRI-SLSVKQA-------DEDYTEEFDP SK------YGMADSYDEQGNYV------FPEGFDSETNEWKEGFDEQRQAWEARYAESERRFQLHTAQIERH RAAAAEAAETEAASA-----NY---SSESNDAAPASEAPAESAGSLASDEQL-------------------- --------------AALREKLAGGEN---------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_939505/1-486 30S ribosomal protein S1 [Corynebacterium diphtheriae NCTC 13129]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MPTNNVPQVAINDIGTAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--HDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPDEVV-EVGD QIDALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGAIEELKEKDE---PVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLDPYIGQQIEAKIIELD-----KQRN-NVVLS RRAWLEQTQSEVRSEFLHQLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVTVGDEV-TVEVLDVDLDRERVSLSLKATQED--PWRVF-ARTHAVGQIVPGRVTKLVPFGAFVR-VE EGIEGLVHISEL--A-QRHVEVPDQVVNVGDEAMVKVIDIDLERRRI-SLSLKQA-------DEDYTEEFDP SK------YGMADSYDEQGNYI------FPEGFDPETNEWLEGFDE--QRQAWEARYAESERRFQLHTVQIE KNRVAAAEAAAAGEATNYS----------------------------------------------------- --------------SESAEAAPAAANTEAEGGSLASDEQLAALREKLAGN---------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_600575/1-486 30S ribosomal protein S1 [Corynebacterium glutamicum ATCC 13032]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MPTNNAPQVAINDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPDEVV-EVGD QIDALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGAIEELKEKDE---PVTGT VIE--VVKG-GLI-IDI--GLRGFLPASLVEMRRV---RDLDPYIGQELEAKIIELD-----KNRN-NVVLS RRAFLEQTQSEVRSEFLHQLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVTVGDEV-TVEVLEVDLDRERVSLSLKATQED--PWRVF-ARTHAVGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-QRHVEVPDQVVAVGEEVMVKVIDIDLERRRI-SLSLKQA-------DEDYTEEFDP SK------YGMADSYDEQGNYI------FPEGFDAETNEWLEGFDEQRQAWEARYAESERRFTAHTAQIERR RQQAEEAAAEAPAGN--YS----------------------------------------------------- --------------TDSAEDAPAAEAVEESAGSLASDEQLAALREKLAGN---------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_738067/1-485 30S ribosomal protein S1 [Corynebacterium efficiens YS-314]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MPTNNAPQVAINDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--HDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPDEVV-QVGD QIDALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGAIEELKEKDE---PVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLDPYIGQELEAKIIELD-----KNRN-NVVLS RRAFLEQTQSEVRSEFLHQLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVTVGDEV-TVEVLDVDLDRERVSLSLKATQED--PWRVF-ARTHAVGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-QRHVEVPDQVVTVGEEVMVKVIDIDLERRRI-SLSLKQA-------DEDYTEEFDP SK------YGMADSYDEQGNYI------FPEGFDPETNEWLEGFDEQRQAWEARYAESERRFQAHTAQIERR RQ-----------------------QAEEAAAEAPAGNYSSESEDAAPSAAV-------------------- --------------EETGGSLASDEQLAALREKLAGN----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00381439/1-495 COG0539: Ribosomal protein S1 [Brevibacterium linens BL2]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------MTTTTPESVQPKQVAVNDIGTAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DET--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--RDE--VLV-DI--G-Y----------------KTEGV-VLSREL--SIKHDVDPGEVV-EVGD EIEALVL-QKE--------DKE----GRLM----LSKKRA-------QYERAWGDIEKIKEDNG---VVTGT VIE--VVKG-GLI-VDI--GLRGFLPASLVEMRRV---RDLAPYIGQQVEAKIIELD-----KNRN-NVVLS RRAWLEQTQSAVRHDFLQTLQKGQVRP----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PGEVVTVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWQHF-ARTHVIGQIVPGKVTKLVPFGAFVR-VE DGIEGLVHISEL--A-VRHVDLPEQVVSVDETIYVKVIDIDLERRRI-SLSLKQA----------------- -------NEGVDPEADEF----------LDPALYGMPQEYD--------EDGNYKYPEGFDPETNEWMEGFD SQREV------------WEQQY---AAAQERWEEHKKQVAK-AIAADAEAGS-------------------- --------------EEAGSAPAEAAPATGSFSSEEAGDEGTLASDEALAA---------------------- ------------------------LREKLAGS---------------------------------------- ------------------------------------------------------------------------ ------------ >YP_831545/1-491 RNA binding S1 domain protein [Arthrobacter sp. FB24]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------MTITSTEKPGTPVVAINDIGTAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DLVEG TVVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPGDVV-SVGD QVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGDIEKVKEEDG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLAPYIGQQIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSTFLNKLEKGQVRP----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLEVDLDRERVSLSLKATQED--PWQTF-ARTHALGQVVPGKVTKLVPFGAFVR-VE DGIEGLVHISEL---AVRHVELAEQVVSVGDELFVKVIDIDLERRRI-SLSLKQA----------------- --NEGVDADSTEFDPALYGMAAE------------------------YDEEGNYKYPEGFDPESNEWLEGYE NQRAA------------WEQQY---ADAQTRWEAHKKQVAQHAADDAAAAT--------------------- -----SGDSD----SGTTSYSSEPAAAETGAGTLASDEALAALREKLTGN---------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_947812/1-491 ribosomal protein S1 [Arthrobacter aurescens TC1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------MTITSTEKPGTPVVAINDIGTAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DLVEG TVVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPGDVV-AVGD QVEALVL-TKE--------DKE----GRLI----LSKKRA-------QYERAWGDIEKVKEEDG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLAPYIGQQIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSTFLNKLEKGQVRP----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLEVDLDRERVSLSLKATQED--PWQTF-ARTHALGQVVPGKVTKLVPFGAFVR-VE DGIEGLVHISEL--A-VRHVELAEQVVSVGDELFVKVIDIDLERRRI-SLSLKQA----------------- --NEGVDADSTEFDPALYGMAAE------------------------YDEEGNYKYPEGFDPESNEWLEGYE TQRAA------------WEQQY---ADAQTRWEAHKKQVAQHAADDAAAATSGESD---------------- --------------SGTTSYSSEPAAAESNAGTLASDEALAALREKLTGN---------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01647560/1-493 RNA binding S1 [Salinispora arenicola CNS205]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSSIEAPS----------SAT----KVTVDDLGSEE-AF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DET--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPAEVV-SVGD HIEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKIKDEDG---VVRGS VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGRELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRTEFLNKLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-EVEVLDVDLDRERVSLSLKATQED--PWRQF-ARTHAIQQIVPGKVTKLVPFGAFVR-VD DGIEGLVHISEL---AERHVEIPEQVVQVGSEVMVKVIDIDLERRRI-SLSLKQA---------------NE GFVEGEEH--------------------FDPTLYGMAATYDAEGNY--------IYPEGFDPETGEWLEGYE KQRETWEQQYAEARQ-----RWEAHQKQVQASRAADAEAAANPPAAGPTTTT------------TAAPSRPA --------------EEPAGTLATDEALAALREKLAGGK---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01432371/1-493 RNA binding S1 [Salinispora tropica CNB-440]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSSIEAPS----------SAT----KVTVDDLGSEE-AF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DET--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TVVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPAEVV-SVGD HIEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKIKDEDG---VVRGS VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGRELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRTEFLNKLQKGQVRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-EVEVLDVDLDRERVSLSLKATQED--PWRQF-ARTHAIQQIVPGKVTKLVPFGAFVR-VD DGIEGLVHISEL---AERHVEIPEQVVQVGSEVMVKVIDIDLERRRI-SLSLKQA--------NEGFVEGEE HFDP--TLYGMAATYDAEGNYI------YPEGFD----------------PETGEWLEGYEKQRETWEQQYA EARLRWEAHQKQVQASRAADAE---AAANPPAASPTTTTTA-APSRQA------------------------ --------------EEPAGTLATDEALAALREKLAGGK---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_055492/1-498 30S ribosomal protein S1 [Propionibacterium acnes KPA171202]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSSTEASTSNPVDTDQQNVANTADGSVAVDDLGSPE-AF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVSG TVVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSKEL--SIKHDVDPFEVV-NVGD EIEALVQ-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEQIKEEDG---VVTGT VIE--VVKG-GLI-VDI--GLRGFLPASLVEMRRV---RDLQPYVGQEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRQNFLHQLQKGQIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQPV-TVEVLDVDMDRERVSLSLKATQED--PWQAF-ARLHQIGQIVPGKVTKLVPFGAFVR-VE DGIEGLVHVSEL--A-ERHVEIPEQVVSVNDDVMVKIIDIDLDRRRI-SLSLKQA----------------- --NEGIDVESDEFDPSLYGMAAS------------------------YDEDGNYIYPEGFDPETNEWKPGYD EQRIA------------WEQQY---AEAQARWEAHRKQVIE-AEQADQEAAL------------TDGGAQSS YTS-----------GPAEGSLASDEALQALRDKLTHN----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00619129/1-505 RNA binding S1 [Kineococcus radiotolerans SRS30216]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------MTTTTTAPAGTTPQIAINDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DAT--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVSG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-GVGD EVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEAKKEADE---VVEGV VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGKTIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRQNFLTTLQKGQVRS----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLDVDMDRERVSLSLKATQED--PWQQF-ARTHAIGQVVPGKVTKLVPFGAFVR-VD DGIEGLVHISEL--A-ERHVEVPEQVVQVNSDIFVKVIDIDLERRRI-SLSLKQA----------------- --TESLAAAGEEFDPSLYGMAAD------------------------YDEQGNYKYPEGFDPETNDWLEGFE AQREE------------WEGQY---ALAHERWEQHKKQVAE-AAEAEAKAE-------------AEGVTAAT SS------------SSSSSSSSSSSSAPSSYTSEAPEAAGTLASDEALAALR----------EKLTGGN--- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00995442/1-502 30S ribosomal protein S1 [Janibacter sp. HTCC2649]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTASTVETT-----------AP----QIAINDIGSEE-DL----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DAT--IK-- ---------------------------H-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG IIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDIDPNEVV-KVGD EVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKVKEEDG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGKEIEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRTTFLKELQKGQVRS----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWQHF-ARTHAIGQVVPGKVTKLVPFGSFVR-VE DGIEGLVHISEL--A-ERHVELPEQVVTVGADIFVKVIDIDLERRRI-SLSLKQA-----------NEDGAG LTEFDPTLYGMAAEYDEQGAYK------YPEGFDS------------ETNEWLEGYEKQREV---------- -----------------WEKQY---AEAHARWESHRTQVEE-AAKADAEAAA--------GG---------- --------------DSATSYSSDSSSAASDSDDEGSDSRPAAPPANEGTLAS------DEALAALREKL--- ------------------------------------------------TGN--------------------- ------------------------------------------------------------------------ ------------ >ZP_00571970/1-493 RNA binding S1 [Frankia sp. EAN1pec]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSTTDVRPVETVTTSHSPTTP----QVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DKT--IK-- ---------------------------F-------------------------------------------- --------------------------------------------FN-D----------------G--DIVDG IIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPHEVV-TVGD HVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKLKEEDG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGRELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLAQLAKGQIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLDVDLDRERVSLSLKATQED--PWRQF-ARTHAIGQVVPGRVTKLVPFGAFVR-VD EGIEGLVHISEL--A-ERHVEIPEQVVNVGDEILVKVIDIDLDRRRI-SLSLKQA----------------- NEASSLVAEGESFDPSQYGMEAK------------------------YDEQGNYVYPEG---------FDPE TGEWLPGFEEQQAE---WERQY---AEAQTRFEAHQAQIRA-AQEADAAAAA------------PSSYTSSQ --------------SEQPASAIDEEALRRLREQFGRE----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_712019/1-518 30S ribosomal protein S1 [Frankia alni ACN14a]. ------------------------------------------------------------------------ --------------------------------------------------------------MSLSLGPGGS IRPSRGRPPLVGADPLTSTTDVRPVETVTTAHSPTTP----QVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DKT--IK-- ---------------------------F-------------------------------------------- --------------------------------------------FN-D----------------G--DIVDG IIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPHEVV-SVGD HVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKLKDEDG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGRELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLAQLAKGQIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLDVDLDRERVSLSLKATQED--PWRQF-ARTHAIGQVVPGRVTKLVPFGAFVR-VD EGIEGLVHISEL--A-ERHVEIPEQVVNVGDEILVKVIDIDLDRRRI-SLSLKQA----------------- NEASGLAVDGEAFDPSQYGMEAK------------------------YDEQGNYVYPEG---------FDPE TGEWLEGYEEQQAE---WERQY---AEAQARFEAHQVQIRA-AQEADAAAAA------------PSSYTSSQ --------------SDQPASAIDEEALRRLREQFGRE----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_480168/1-492 RNA binding S1 [Frankia sp. CcI3]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSTTDVRPVETVTISPSPTTP----QVAVNDIGSAE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAV---DKT--IK-- ---------------------------F-------------------------------------------- --------------------------------------------FN-D----------------G--DIVDG IIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPHEVV-SVGD HVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKLKDEDG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGRELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRSEFLAQLAKGQIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLDVDLDRERVSLSLKATQED--PWRQF-ARTHAIGQVVPGRVTKLVPFGAFVR-VD EGIEGLVHISEL--A-ERHVEIPEQVVNVGDEILVKVIDIDLDRRRI-SLSLKQA----------------- NEATGLAVDGEAFDPSQYGMEAK------------------------YDEQGNYVYPEG---------FDPE TGEWLEGYEEQQAE---WERQY---AEAQARFEAHQVQIRA-AQEADAAAAA------------PSSYTSQ- --------------SEQPSSAIDEEALRRLREQFGRE----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_924178/1-490 RNA binding S1 domain protein [Nocardioides sp. JS614]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------MTSTISVLPDYDAPQVAVNDIGSEADF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DET--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVAG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPSEVV-AVGD EVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEQVKEEDG---VVEGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGQTLEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRHGFLTQLQKGQIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVAVGDEV-TVEVLDVDMDRERVSLSLKATQED--PWQHF-ARTHQIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEIPEQVVQVNDDVMVKIIDIDLERRRI-SLSLKQA---------NETATAAD VEDFDPTLYGMAATYDEQGNYV------YPEGFD----------------PETGEWLEGYEEQRAVWEDQYA KAHAR------------WE-AHVKQQAEAAKAEVEAGEATS-YSSGGTDTDS-------------------- --------------AETGGSLASDEALQALREKLTGGN---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_289252/1-485 30S ribosomal protein S1 [Thermobifida fusca YX]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSSTEATS-----------TP----QVAVNDIGSEE-AF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DET--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVEG TIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPHEVV-AVGD HVEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKIKEEDG---VVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGRELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRQTFLNTLQKGQIRK----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLDVDMERERVSLSLKATQED--PWQQF-ARTHQIGQIVPGKVTKLVPFGAFVR-VE EGIEGLVHISEL--A-ERHVEVPEQVVQVGTEIFVKIIDIDLDRRRI-SLSLKQA-------NESISPDQTE FDP---TMYGMVAEYDEHGNYK------YPEGFDPETG----EWME-GYEAQRDEWERQYALAQARFEAHRK Q------------------------VQEAQAAEAAAAQEQQADDDSGS------------------------ --------------GQGGGELASDEALAALREKLAGGGES-------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_626259/1-502 30S ribosomal protein S1 [Streptomyces coelicolor A3(2)]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSSTETTA----------TTP----QVAVNDIGNEE-AF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DET--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVDG VIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-AVGD EIEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKIKEEDG---IVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGKELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRQTFLTTLQKGQVRS----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLDVDMDRERVSLSLKATQED--PWQQF-ARTHQIGQVVPGKVTKLVPFGAFVR-VD EGIEGLVHISEL--A-ERHVEIPEQVVQVNDEIFVKVIDIDLERRRI-SLSLKQA--------NEAFGADPS TVEFDPTLYGMAASYDDQGNYI------YPEGFD----------------PETNDWLEGYETQREAWETQYA EAQTRFEQHQAQVIK----------SREADEKAAAEG-----VDTAGAAPAA--------SGGGGGGSYSSE G-------------GDNSGALASDEALAALREKLAGGQS--------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_827409/1-501 30S ribosomal protein S1 [Streptomyces avermitilis MA-4680]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MTSSTETTS----------TTP----QVAVNDIGNEE-AF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAI---DET--IK-- ---------------------------Y-------------------------------------------- --------------------------------------------FN-D----------------G--DIVDG VIVKV-D--RDE--VLL-DI--G-Y----------------KTEGV-IPSREL--SIKHDVDPNEVV-KVGD EIEALVL-QKE--------DKE----GRLI----LSKKRA-------QYERAWGTIEKIKEEDG---IVTGT VIE--VVKG-GLI-LDI--GLRGFLPASLVEMRRV---RDLQPYVGKELEAKIIELD-----KNRN-NVVLS RRAWLEQTQSEVRQTFLTTLQKGQVRS----GVVSS-IVNFGAFVDL------GGVDGLVHVSELSWKHIDH PSEVVEVGQEV-TVEVLDVDMDRERVSLSLKATQED--PWQQF-ARTHQIGQVVPGKVTKLVPFGAFVR-VD EGIEGLVHISEL--A-ERHVEIPEQVVQVNDEIFVKVIDIDLERRRI-SLSLKQA--------NEAFGGDPA SVEFDPTLYGMAASYDDQGNYI------YPEGFD----------------PETNDWLEGFESQREVWETQYA EAQQRFEQHQAQVIK----------SREADAQAEAEGAAAPAAGGSGAG---------------VSGGSYSS ES------------DDNSGALASDEALAALREKLAGGQS--------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01148263/1-672 LytB protein [Desulfotomaculum reducens MI-1]. -------------------------------------------------MRIKLASKAGFCYGVKRAIDLAL STAKEKAGNIYTLGPLIHNPQVVQNLAENGICEINDIGEVKEGTVIIRSHGVGPEIIQAAREKGLKVLDATC PFVARAQKYAHEMAAQGIPVYILGDPGHPEVQGILGWTEGKGSVIDNPSEIT-RV--EHPKVGVVAQTTQPL SNFQALLEALQNQGVEVDARNTICHATGERQRAAMELAREVDVMVVVGGKNSANTKKLAKICQETGTPTYHV ESARELRKEWFLGHEIVGLTAGASTPDAIIEEVKKRMNEMDQMTNGEEGM-------SEA---ME---VK-- ---------------------------S-------------------------------------------- --------------------------------------------PQ-A----------------G--ELVKG IVVQV-G--MDE--VLV-DI--R-A----------------KSEGV-IPRKEM--AFYGVDNLQEIV-KVGD EIECVVI-KAE--------DNE----GKII----LSKERA-------DAEKAWDGLEEAMEQGT---IIKGV VRE--VVKG-GML-VDV--GVRAFLPASLVERGYV---EDLSKYLNQEFEVRVIEMN-----KQRK-KVVVS RKAVLEEQNARKREELLASLQEGQIVK----GIVRR-ITNFGAFVDL------GGLDGLLHISEMSWHRINH PQEVVKVGDEL-EVMVLKVDTQNEKISLGLKQVLPN--PWDNV-EEKYPVGNIFNAKVVRLAPFGAFVQ-LE PGVEGLVHISHL--A-DRHVEKPEDVVKEGEEVQVKVLSMDPSEKRV-RLSIREV----------------- --------NGERRSARE------------------------------------------------------- -------------------------ARPRKQEEVQEQNVMN------------------------------- --------------ETPEEKITLGDVFGDMF---------------------------KEK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01188489/1-703 LytB protein [Halothermothrix orenii H 168]. --------------------------------------------MSVLEVYVADESGFCFGVKRAINLAMEA AGNNKEEIPVYTLGPLIHNPQVVKRLKEMGIESLDSLDIIDNGVIIIRSHGVPPDIIEKARQKGLHIIDATC PYVKNAQKYARELVDKGYQTIIFGDRDHPEVIGINGAARNESIIISSEKEIK-DI-NLSSKVGLIAQTTKSP ASFQKIVSYILPEVKELRIYNTICRTTETRQKSAVDLARQVDAMFVIGGKNSANTTRLAELCAETGTPTYHI ETAGEIDFRQLKSYNKIGITAGASTPDWLIKEVIEAMSEEKRDAEL---Q-------EEI---QEG--VNTD NTPETPNGEENPIENEEEFNYDDNNPAD-------------------------------------------- --------------------------------------------LK-K----------------G--QQVKG KVVEI-G--DNG--VYV-DV--G-Y----------------KTEGL-IPLREL--SHRDFEDPHEIV-EEGE EIDVIVL-TLE--------DEE----GNMV----LSKKRA-------DFEKAWERILKAYENDE---IIEAE VTR--EVKG-GLV-VDI--GLRGFVHASHVAIGYV---EDLSDYVGKTLRLKVIEVE-----RDKN-NVVLS AKKVLEEEREKQKEKTLEELQEGQVVK----GKVTK-IVDFGAFVDL------GGIEGLLHISEMSWGRIEH PSEVLEEGQEI-EVKVLAVNKEEERISLGLKQLLPD--PWEEF-AKKHYEGEVVSGTITKIVDFGAFME-IE NGIEGLIHISQL--S-HRHVKTPDEVVSVGEEIKAEIINIDPEQKRV------------------------- ------------------------------------------------------------------------ ----GLSIKALEEQP----------ETPKKVEAPKKEPTRE------------------------------- --------------NESTSGVTIGEIVGDILKKEDDK----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_618890/1-401 30S ribosomal protein S1 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MSE-NN----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QFL---DALAQMK-- ---------------------------E-------------------------------------------- --------------------------------------------VK-E----------------G--DIVDV NVLSV-E--DGQ--INV-GV-QG-A----------------GVEGV-ITRRDF--TNDRSVNLRDEV-KLGD TFKVYVV-RRA--------GGD-KENGDFF----FSVTRV-------KEREAYDKLQKDFEEGK---TIEGK VTS--SVRG-GLL-VDV--GTRGFLPASLISNRFV---SDLKPYIGKTIKVKITEID-----PAKN-RLILS HKELIEEEREQAFENVASQLVVGDVVE----GRVSR-LTDFGSFVDI------GGVDGLVHISEISYKHVDK PSDVLKVGQDV-KVKVIGIDNDRHRISLSIKQTEPS--PFEQA-TSSLNEGDVIEGEVKSLTNFGAFVE-VA DGIQGLVHVSEI--AY-KHVDKPSDVLKVGQDVKVKVLNIDPSKRRI-SLSIKQV---------DPENASSS NDRPRARRSS-------------------------------------NNNAFARKYMNNDD----------- ------------------------------------------------------------------------ ------------------NGFSLGDMIGDQLKNS-------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_812823/1-401 Ribosomal protein S1 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------MSEN-N-QF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------DAL---AQ---MK-- ---------------------------E-------------------------------------------- --------------------------------------------VK-E----------------G--DIVDV NVLSV-E--DGQ--INV-GV-QG-A----------------GVEGV-ITRRDF--TNDRSVNLRDEV-KLGD TFKVYVV-RRA--------GGD-KENGEFF----FSVTRV-------KEREAYDKLQKDFEEGK---TIEGK VTS--SVRG-GLL-VDV--GTRGFLPASLISNRFV---SDLKPYIGKTIKVKITEID-----PAKN-RLILS HKELIEEEREQAFENVASQLVVGDVVE----GRVSR-LTNFGSFVDI------GGVDGLVHISEISYKHVDK PSDVLKVGQDV-KVKVIGIDNDRHRISLSIKQTEPS--PFEQA-TSSLNEGDVIEGEVKSLTNFGAFVE-VA DGIQGLVHVSEI--AY-KHVDKPSDVLTVGPKVKVKVLNIDPSKRRI-SLSIKQV----------------- ---------------------------------------------------------------------DPE NASSSNDRPRARRSS--NNNAF-------------------------------------------------- -----ARKYM----NNDDNGFSLGDMIGDQLKNS-------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_193850/1-403 30S Ribosomal protein S1 [Lactobacillus acidophilus NCFM]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------MSENSN-QF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------DAL---KQ---MQ-- ---------------------------G-------------------------------------------- --------------------------------------------VE-V----------------G--DIVDV EVLDV-E--DGQ--IDV-GV-EN-A----------------GVEGV-ITRREY--TSDRNADLRDLV-KPGD KFKALVL-RRA--------GGD-KENGEFF----FSVTRL-------KEREAFDKLQKDFEEGN---AIEGT VTS--SVRG-GLL-VDV--GTRGFLPASLISNRYV---SDLKPYIGKTMKLKITEID-----PNKN-RLILS HKDLVEEEREEAFDKVASQLVVGDVVE----GKVSR-LTNFGSFIDV------GGVDGLVHISEISYKHVDK PSDVLKVGQDV-KVKVIGIDNDRHRISLSIKQTEPS--PFEQA-TADLNEGDIFEGEVKSLTNFGAFVE-VA DGIQGLVHVSEI--S-NKHVDKPSDVLKVGQTVKVKVLNIDPNDRRI-SLSIKAA----------------- ---------------------------------DSNSSSSD------NHNSRPRRSRNENTVNKKYM----- ------------------------------------------------------------------------ --------------SDNDNGFALGDIIGDQLK--------------------------DRK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_814719/1-399 Ribosomal protein S1 [Lactobacillus gasseri ATCC 33323]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------MTDNSN-QF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------DAL---KE---MQ-- ---------------------------G-------------------------------------------- --------------------------------------------VE-V----------------G--NIVNV EVLSV-E--DGQ--IAV-GV-EN-A----------------GVEGV-ITKREF--TNDRNADLNQLV-KPGD KFEALVL-RRA--------GGD-KENGEFF----FSVTRL-------KEREAYKELEKVFEEGK---TVEGT VTG--AVRG-GLL-VDV--GTRGFLPASLISNRYV---SDLKPYIGKKMNLKITEID-----PNKN-RLILS RKDLIEKEREEAFENVASQLVVGDTVE----GKVSR-LTGFGAFVDV------GGVDGLVHISEISYKHVDK PSDVLKAGQDV-KVKVIGIDDDRHRISLSIKQTLPS--PFEEA-TEGLHEGDIIEGEVKTLTSFGAFVE-VA DGIQGLVHVSEI---ANKHVDKPSDVLKVGQTVKVKVLSVDPSDRRI-SLSIKQA-------DPNA------ -----------------------------------------------AKSENSRPRRRQDSVADKYM----- ------------------------------------------------------------------------ --------------NDNDNGFALGDIIGDQLKDKD------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_964946/1-400 30S ribosomal protein S1 [Lactobacillus johnsonii NCC 533]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------MTDNSN-QF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------DAL---KE---MQ-- ---------------------------G-------------------------------------------- --------------------------------------------VE-V----------------G--NIVNV EVLSV-E--DGQ--IAV-GV-EN-A----------------GVEGV-ITKREF--TNDRNADLNQLV-KPGD KFEALVL-RRA--------GGD-KENGEFF----FSVTRL-------KEREAYKELEKVFEEGK---TVEGT VTG--AVRG-GLL-VDV--GTRGFLPASLISNRYV---SDLKPYIGKKMNLKITEID-----PNKN-RLILS RKDLIEQEREEAFENVASQLVVGDTVE----GKVSR-LTGFGAFVDV------GGVDGLVHISEISYKHVDK PSDVLKAGQDV-KVKVIGIDDDRHRISLSIKQTLPS--PFEEA-TEGLHEGDIIEGEVKTLTSFGAFIE-VA DGIQGLVHVSEI---ANKHVDKPSDVLKVGQTVKVKVLSVDPSDRRI-SLSIKQA-------DPNAA----- -----------------------------------------------KSENNSRPRRRQDSVADKYM----- ------------------------------------------------------------------------ --------------NDNDNGFALGDIIGDQLKDKD------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_266994/1-408 30S ribosomal protein S1 [Lactococcus lactis subsp. lactis Il1403]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------TLL---NS---VE-- ---------------------------D-------------------------------------------- --------------------------------------------VK-V----------------R--DVVKG EILSV-E--NGQ--ATV-AI-VG-T----------------GVEGV-LTLREI--TNDKDADINTFV-KPGD VLDLLVIKQIV--------GKEAEGANVYL----LSLKRL-------EARKAWTQLEGK--EGE---IVTVK VTK--DVKG-GLS-VDYN-GVRGFIPASMIDTYFV---KDTKKFVGEEIEAKIIEVN-----ASEN-RFILS RRAVVEAEAIEMRKEAFAQLQEGDIVE----GTVSR-VTNFGAFVDL------GGIDGLVHVSELSHSRIKR PSDAVKPGDVV-NVKILKLDPEAGRLSLSLKATQPG--PWEQV-EEKAPVGSTVEGTVKRLTDFGAFVE-LY PGVEGLVHVSQI--SW-ERVENPKDVLKVGQVVNVKVLDVKPAEERI-SLSIKAL-------EEAPARPARN NDNDGEKRDRKPRA---------------------------------PRKAAKPSYDLPETQEGFSLA---- --------------------DF-------------------------------------------------- ----------------------LGEDFDINDL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_358358/1-400 30S ribosomal protein S1 [Streptococcus pneumoniae R6]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------DLL---NSVSQVE-- ------------------------------------------------------------------------ -----------------------------------------------T----------------G--DVVSA EVLTV-D--ATQ--ANV-AI-SG-T----------------GVEGV-LTLREL--TNDRDADINDFV-KVGE VLDVLVLRQVV--------GKD----TDTV-TYLVSKKRL-------EARKAWDKLVGREEEVV---TVKGT R----AVKG-GLS-VEFE-GVRGFIPASMLDTRFV---RNAERFVGQEFDTKIKEVN-----AKEN-RFILS RREVVEAATAAARAEVFGKLAVGDVVT----GKVAR-ITSFGAFIDL------GGVDGLVHLTELSHERNVS PKSVVTVGEEI-EVKILDLNEEEGRVSLSLKATVPG--PWDGV-EQKLAKGDVVEGTVKRLTDFGAFVE-VL PGIDGLVHVSQI---SHKRIENPKEALKVGQEVQVKVLEVNADAERV-SLSIKAL-------EERPAQEEGQ KEEKRAA----------------------------------------RPRRPRRQEKRDFEL---------- ------------------------------------------------------------------------ --------------PETQTGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_345350/1-400 30S ribosomal protein S1 [Streptococcus pneumoniae TIGR4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------DLL---NSVSQVE-- ------------------------------------------------------------------------ -----------------------------------------------T----------------G--DVVSA EVLTV-D--ATQ--ANV-AI-SG-T----------------GVEGV-LTLREL--TNDRDADINDFV-KVGE VLDVLVLRQVV--------GKD----TDTV-TYLVSKKRL-------EARKAWDKLVGREEEVV---TVKGT R----AVKG-GLS-VEFE-GVRGFIPASMLDTRFV---RNAERFVGQEFDTKIKEVN-----AKEN-RFILS RREVVEAATAAARAEVFGKLAVGDVVT----GKVAR-ITSFGAFVDL------GGVDGLVHLTELSHERNVS PKSVVTVGEEI-EVKILDLNEEEGRVSLSLKATVPG--PWDGV-EQKLAKGDVVEGTVKRLTDFGAFVE-VL PGIDGLVHVSQI--S-HKRIENPKEALKVGQEVQVKVLEVNADAERV-SLSIKAL-------EERPAQEEGQ KEEKRAARPRR------------------------------------PRRQEKRDFELPETQTG-------- -----------------FS-----------------------MADLFGDIEL-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_721581/1-399 30S ribosomal protein S1 [Streptococcus mutans UA159]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------DLL---NSVSEVN-- ------------------------------------------------------------------------ -----------------------------------------------P----------------G--DVVTA EVLTV-D--GEQANLVI-DG-TG-------------------VEAV-LTLREL--TNDRNADINDFV-KAGD KVEVLVLRQVV--------GKD----TDTV-TFLVSKKRL-------EARKAWDKLVGREGDVV---TVKGT R----AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEKFVGQQFEAKIKEID-----PSEN-RFILS RRDVVEAAAAKAREEVFSRLAVGDIVT----GTVAR-LTSFGAFIDL------GGVDGLVHITELSHERNVS PKSVVTVGEEI-QVKVLAIDEEAGRVSLSLKATTPG--PWDGV-EQKLAAGDVIEGKVKRLTDFGAFVE-VL PGIDGLVHISQI--S-HKRVENPKDVLSVGQDVTVKVLDVNTADERV-SLSIKAL----------------- ------------------------------------------------EERPAQDESNGEKRQSRPRRQKRQ DKR-----------------DY----------------------------EL-------------------- --------------PETQTGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_139113/1-417 30S ribosomal protein S1 [Streptococcus thermophilus LMG 18311]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MLSRVRIGWLLLEDFFRMNEF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------ELL---NSVSEVS-- ------------------------------------------------------------------------ -----------------------------------------------T----------------G--DVVTA EVISV-D--NDQANVVI-EG-TG-I------------------EGV-LTRREL--TNDRDANVADLV-KDGE TLEVLVLRQVV--------GKD----TDTV-TYLVSKKRL-------EARKAWDKLVGREEEVV---TVKGT R----AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEQFVGQEFDAKIKEVD-----PAEN-RFILS RREVVEAEAIEARKEVFSKLEVGSVVT----GKVAR-LTSFGAFIDL------GGVDGLVHVTELSHERNVS PKSVVSVGDEI-EVKVLAIDEEAGRVSLSLKATTPG--PWDGV-EQKLAAGDVIEGKVKRLTDFGGFVE-VL PGIDGLVHISQI--S-HKRVENPKDVLSVGQDVTVKVLEVNADAERV-SLSIKAL-------EERPANAEGE NNEKRQS----------------------------------------RPRRPKRQEKRDYEL---------- --------------P--------------------------------------------------------- ---------------ETQSGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_820100/1-400 Ribosomal protein S1 [Streptococcus thermophilus LMD-9]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------ELL---NSVSEVS-- ------------------------------------------------------------------------ -----------------------------------------------T----------------G--DVVTA EVISV-D--NDQ--ANV-VI-EG-T----------------GIEGV-LTRREL--TNDRDANVADLV-KDGE TLEVLVLRQVV--------GKD----TDTV-TYLVSKKRL-------EARKAWDKLVGREEEVV---TVKGT R----AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEQFVGQEFDAKIKEVD-----PAEN-RFILS RREVVEAEAMEARKEVFSKLEVGSVVT----GKVAR-LTSFGAFIDL------GGVDGLVHVTELSHERNVS PKSVVSVGDEI-EVKVLAIDEEAGRVSLSLKATTPG--PWDGV-EQKLAAGDVIEGKVKRLTDFGGFVE-VL PGIDGLVHISQI---SHKRVENPKDVLSVGQDVTVKVLEVNADAERV-SLSIKAL-------EERPANAEGE NNEKRQS----------------------------------------RPRRPKRQEKRDYEL---------- ------------------------------------------------------------------------ --------------PETQSGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00781663/1-466 30S ribosomal protein S1 [Streptococcus agalactiae 18RS21]. ------------------------------------------------------------------------ ---------------------------------------------------------MGYSQAVRQGTLTPS CVGSNPATPVKGIKLLFDTVKEIFVVLAGYLEKIYCYQKLARLAFVGGFFRMNEF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------DLL---NSVSEVN-- ------------------------------------------------------------------------ -----------------------------------------------P----------------G--DVVTA EVLTV-D--NGQANVVI-DG-TG-------------------VEGV-LTLREL--TNDRDADINDFV-KAGD TVEVLVLRQVV--------GKD----TDTV-TFLVSKKRL-------EARKAWDKLVGREGEVV---TVKGT R----AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEKFVGQEFDAKIKEVD-----AAEN-RFILS RREVVEESAAAARKEVFSNIEVGSVVT----GKVAR-LTSFGAFIDL------GGVDGLVHVTELSHERNVS PKSVVTVGEEV-EVKVLSIDEEAGRVSLSLKATTPG--PWDGV-EQKLAAGDVIEGKVKRLTDFGAFVE-VL PGIDGLVHISQI--S-HKRVENPKDVLSAGQEVTVKVLEVNSDAERV-SLSMKAL-------EERPAQAEGE KEEKRQS----------------------------------------RPRRPRRQEKRDYEL---------- --------------P--------------------------------------------------------- ---------------ETQTGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_688159/1-400 30S ribosomal protein S1 [Streptococcus agalactiae 2603V/R]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------DLL---NSVSEVN-- ------------------------------------------------------------------------ -----------------------------------------------P----------------G--DVVTA EVLTV-D--NGQ--ANV-VI-DG-T----------------GVEGV-LTLREL--TNDRDADINDFV-KAGD TVEVLVLRQVV--------GKD----TDTV-TFLVSKKRL-------EARKAWDKLVGR--EGE---VVTVK GTR--AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEKFVGQEFDAKIKEVD-----AAEN-RFILS RREVVEESAAAARKEVFSNIEVGSVVT----GKVAR-LTSFGAFIDL------GGVDGLVHVTELSHERNVS PKSVVTVGEEV-EVKVLSIDEEAGRVSLSLKATTPG--PWDGV-EQKLAAGDVIEGKVKRLTDFGAFVE-VL PGIDGLVHISQI--S-HKRVENPKDVLSAGQEVTVKVLEVNSDAERV-SLSMKAL-------EERPAQAEGE KEEKRQS----------------------------------------RPRRPRRQEKRDYEL---------- --------------P--------------------------------------------------------- ---------------ETQTGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00790982/1-339 ribosomal protein S1 [Streptococcus agalactiae 515]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------VK-A----------------G--DTVEV LVLRQ----------VV-----G---------------------------------------------KDTD TVTFL-----------------------------VSKKRL-------EARKAWDKLVGREGEVV---TVKGT R----AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEKFVGQEFDAKIKEVD-----AAEN-RFILS RREVVEESAAAARKEVFSNIEVGSVVT----GKVAR-LTSFGAFIDL------GGVDGLVHVTELSHERNVS PKSVVTVGEEV-EVKVLSIDEEAGRVSLSLKATTPG--PWDGV-EQKLAAGDVIEGKVKRLTDFGAFVE-VL PGIDGLVHISQI---SHKRVENPKDVLSAGQEVTVKVLEVNSDAERV-SLSMKAL-------EERPAQAEGE KEEKRQS----------------------------------------RPRRPRRQEKRDYEL---------- ------------------------------------------------------------------------ --------------PETQTGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_269108/1-401 30S ribosomal protein S1 [Streptococcus pyogenes M1 GAS]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------DLL---NSVSEVN-- ------------------------------------------------------------------------ -----------------------------------------------P----------------G--DVVTA EVLTV-D--NGQANVVI-EG-TG-------------------VEGV-LTLREL--TNDRDADINDFV-KAGD TVEVLVLRQVV--------GKD----TDTV-TFLVSKKRL-------EARKAWDKLVGREGEVV---TVKGT R----AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEKFVGQEFDAKIKEVD-----AAEN-RFILS RREVIEEAAKEARAEVFSKISEGAVVT----GTVAR-LTSFGAFIDL------GGVDGLVHVTELSHERNVS PKSVVSVGEEV-EVKVLSIDEEAGRVSLSLKATTPG--PWDGV-EQKLAQGDVVEGKVKRLTDFGAFVE-VL PGIDGLVHISQI--S-HKRVENPKDVLSVGQEVTVKVLEVNAADERV-SLSIKAL-------EERP------ AQAEGDNKEEKRQS---------------------------------RPRRPKRESRRDYEL---------- --------------P--------------------------------------------------------- ---------------ETQTGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_664432/1-401 30S ribosomal protein S1 [Streptococcus pyogenes MGAS315]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------DLL---NSVSEVN-- ------------------------------------------------------------------------ -----------------------------------------------P----------------G--DVVTA EVLTV-DNGQAN--VVI-EG-TG-------------------VEGV-LTLREL--TNDRDADINDFV-KAGD TVEVLVLRQVV--------GKD----TDTV-TFLVSKKRL-------EARKAWDKLVGREGEVV---TVKGT R----AVKG-GLS-VEFE-GLRGFIPASMIDTRFV---RNTEKFVGQEFDAKIKEVD-----AAEN-RFILS RREVIEEAAKEARAEVFSKISEGAVVT----GTVAR-LTSFGAFIDL------GGVDGLVHVTELSHERNVS PKSVVSVGEEV-EVKVLSIDEEAGRVSLSLKATTPG--PWDGV-EQKLAQGDVVESKVKRLTDFGAFVE-VL PGIDGLVHISQI---SHKRVENPKDVLSVGQEVTVKVLEVNAADERV-SLSIKAL-------EERP------ AQAEGDNKEEKRQS---------------------------------RPRRPKRESRRDYEL---------- ------------------------------------------------------------------------ --------------PETQTGFSMADLFGDIEL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_301360/1-393 30S ribosomal protein S1 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQEI-E--EKQ--VIV-AV-NG-A----------------KFNGI-IPISQL--STHHIDNPSDAV-KVGD EIGAYVT-KVE--------YDEENETGAYI----LSKRQL-------ETEKSYEFLQEQLDNNQ---TIEAK VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSDFEGQVLKLKVEELD-----PANN-RVILS RKAVEALENAEKKDELLESLNEGDVIE----GKVAR-LTNFGAFVDI------GGVDGLVHVSELSHEHVKS PEDVVSIGETV-NVKIKSVDKDSERISLSIKDTLPS--PFESI-KGEFNEGDVIEGTVVRLANFGAFVE-IK PGVQGLVHISEI--S-HSHIGSPSEALEPGQVVSVKVLGVDVENERI-SLSIKAT----------------- -LPNENVIESDSETTQSY----------LDNG---------------------------------------- ------------------------------------------------------------------------ --------------SDDEDNPTLGDVFGDKLKDFKF------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_416813/1-391 30S ribosomal protein S1 [Staphylococcus aureus RF122]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQQV-E--DKQ--VVV-HI-NG-G----------------KFNGI-IPISQL--STRHIDSPSEVV-KEGD EVEAYVT-KVE--------FDEENETGAYI----LSRRQL-------ETEKSYSYLQEKLDNNE---IIEAK VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSVFDGQTIRIKVEELD-----PENN-RVILS RKAVEQEENDAKKDQLLQSLNESDVID----GKVAR-LTQFGAFIDI------GGVDGLVHVSELSHEHVQT PEEVVSIGQDV-KVKIKSIDRDTERISLSIKDTLPT--PFENI-KGQFHENDVIEGVVVRLANFGAFVE-IA PGVQGLVHISEI---AHKHIGTPGEVLEPGQQVNVKILGIDEENERV-SLSIKAT----------------- -LPNEDVVESDPSTTKAY----------LESG---------------------------------------- ----------EEDNP--------------------------------------------------------- ---------------------TIGDMIGDKLKNLKL------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_040887/1-391 putative 30S ribosomal protein S1 [Staphylococcus aureus subsp. aureus MRSA252]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQQV-E--DKQ--VVV-HI-NG-G----------------KFNGI-IPISQL--STHHIDSPSEVV-KEGD EVEAYVT-KVE--------FDEENETGAYI----LSRRQL-------ETEKSYSYLQEKLDNNE---IIEAK VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSVFDGQTIRIKVEELD-----PENN-RVILS RKAVEQEENDAKKDQLLQSLNEGDVID----GKVAR-LTQFGAFIDI------GGVDGLVHVSELSHEHVQT PEEVVSIGQDV-KVKIKSIDRDTERISLSIKDTLPT--PFENI-KGQFHENDDIEGVVVRLANFGAFVE-IA PGVQGLVHISEI---AHKHIGTPGEVLEPGQQVNVKILGIDEENERV-SLSIKAT----------------- -LPNEDVVE--------------------------------------SDPSTTKAYLESEE----------- -----------EDNP--------------------------------------------------------- ---------------------TIGDMIGDKLKNLKL------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_646182/1-391 30S ribosomal protein S1 [Staphylococcus aureus subsp. aureus MW2]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQQV-E--DKQ--VVV-HI-NG-G----------------KFNGI-IPISQL--STHHIDSPSEVV-KEGD EVEAYVT-KVE--------FDEENETGAYI----LSRRQL-------ETEKSYSYLQEKLDNNE---IIEAK VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSVFDGQTIRIKVEELD-----PENN-RVILS RKAVEQEENDAKKDQLLQSLNEGDVID----GKVAR-LTQFGAFIDI------GGVDGLVHVSELSHEHVQT PEEVVSIGQDV-KVKIKSIDRDTERISLSIKDTLPT--PFENI-KGQFHENDVIEGVVVRLANFGAFVE-IA PGVQGLVHISEI---AHKHIGTPGEVLEPGQQVNVKILGIDEENERV-SLSIKAT----------------- ----------------------------L------------------PNEDVV------------------- -----------ESDP-----ST------------------------------------------TKAYLE-- --------------NEEEDNPTIGDMIGDKLKNLKL------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_372000/1-391 30S ribosomal protein S1 [Staphylococcus aureus subsp. aureus Mu50]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQQV-E--DKQ--VVV-HI-NG-G----------------KFNGI-IPISQL--STHHIDSPSEVV-KEGD EVEAYVT-KVE--------FDEENETGAYI----LSRRQL-------ETEKSYSYLQEKLDNNE---IIEAK VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSVFDGQTIRIKVEELD-----PENN-RVILS RKAVEQEENDAKKDQLLQSLNEGDVIH----GKVAR-LTQFGAFIDI------GGVDGLVHVSELSHEHVQT PEEVVSIGQDV-KVKIKSIDRDTERISLSIKDTLPT--PFENI-KGQFHENDVIEGVVVRLANFGAFVE-IA PGVQGLVHISEI---AHKHIGTPGEVLEPGQQVNVKILGIDEENERV-SLSIKAT----------------- ----------------------------L------------------PNEDVV------------------- -----------ESDP-----ST------------------------------------------TKAYLE-- --------------NEEEDNPTIGDMIGDKLKNLKL------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_253350/1-392 30S ribosomal protein S1 [Staphylococcus haemolyticus JCSC1435]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQQV-E--DKQ--VVV-HI-NG-G----------------KFNGI-IPISQL--STHHIENPSEVV-KQGD EIEAYVT-KIE--------VDEENDSGVYI----LSKRQL-------ETEKSYEYLQEKLDNDE---IIEAK VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSVFDGQTIRIKVEELD-----PENN-RVILS RKAVEQAENDVKKASLLESLNAGDVIK----GKVAR-LTNFGAFVDI------GGVDGLVHVSELSHEHVDS PEDVVSVGQEV-DVKVKSVEKDAERISLSIKDTLPT--PFESI-KGQFHEDDVIEGKVVRLANFGAFVE-IA PGVQGLVHISEI--A-HEHIGTPGEKLEPGQQVNVKILGIDEENERI-SLSIKAT----------------- -LPKEDVVE--------------------------------------SDDATTQSYLSNDSI---------- -----------EDNP--------------------------------------------------------- ---------------------TLGDVFGDKFKDLKF------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_188621/1-392 ribosomal protein S1 [Staphylococcus epidermidis RP62A]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQQV-E--DKQ--VVV-HI-NG-G----------------KFNGI-IPISQL--STHHIENPSEVV-KVGD EVEAYVT-KIE--------FDEENDTGAYI----LSKRQL-------ETEKSYEYLQEKLDNDE---VIEAE VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSVFDGQTIRIKVEELD-----PENN-RVILS RKAVEQLENDAKKASILDSLNEGDVID----GKVAR-LTNFGAFIDI------GGVDGLVHVSELSHEHVQT PEEVVSVGEAV-KVKVKSVEKDSERISLSIKDTLPT--PFENI-KGKFHEDDVIEGTVVRLANFGAFVE-IA PSVQGLVHISEI--D-HKHIGSPNEVLEPGQQVNVKILGIDEDNERI-SLSIKAT----------------- ------------------------------------------------------------------------ ----------------------------LPKENVIESDAST-----------------------TQSYLED- --------------DNDEDKPTLGDVFGDKFKDLKF------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_764720/1-240 30S ribosomal protein S1 [Staphylococcus epidermidis ATCC 12228]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------ESM--------IN-- ---------------------------D-------------------------------------------- --------------------------------------------IK-E----------------G--DKVTG EVQQV-E--DKQ--VVV-HI-NG-G----------------KFNGI-IPISQL--STHHIENPSEVV-KVGD EVEAYVT-KIE--------FDEENDTGAYI----LSKRQL-------ETEKSYEYLQEKLDNDE---VIEAE VTE--VVKG-GLV-VDV--GQRGFVPASLISTDFI---EDFSVFDGQTIRIKVEELD-----PENN-RVILS RKAVEQLENDAKKASILDSLNEGDVID----GKVAR-LTNFGAFINI------GGVDGLVHVSELSH----- -------------------------------------------------------GTCSN------------ -------------------------------------------TRRS-CVSR-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00540643/1-377 RNA binding S1 [Exiguobacterium sibiricum 255-15]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-EM----------------- ------------------------------------------------------------------------ ---------------------------------------------------------------KD---MP-- ---------------------------D-------------------------------------------- --------------------------------------------FE-I--------------HRD--QVVTG TVVKI-E--DKQ--ALI-DI--G-Y----------------KTEAI-LPISEV--SSLHLDDIQGAL-KVGD ELQVKVK-KIT--------DEE------VV----VSKREV-------DALQAWEKVEAKYASGE---IFEVV VKD--IVKG-GLV-VDI--GVRGFIPASLVERHYV---EDFSDYIGRTIAVKVVELD-----QEKN-RVILS HKAVVEGELNAKKKETLEHLEVGQVLE----GTVQR-LTDFGAFVDI------GGVDGLVHISEMAHHRVER PSDIVTEGQKV-EVKVLGVDRDTEKVKLSIKETQPG--PWQQM-EGKIEAGDIVKGRVRRIVQFGAFVE-LA PQVEGLLHISQI--A-NRHIGSPSEVLEEGQEIEAKVLEVHLAEHKI-SLSTRVL----------------- -----------------------------------------------EQEDSSNDD---------------- -----------------YS-QY-------------------------------------------------- --------------TDQNEGFSVADLSEKESDTKE------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01179704/1-300 RNA binding S1 [Bacillus cereus subsp. cytotoxis NVH 391-98]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------SKRAV-------DAEKAWVELQEKFTSGE---VFDVT VND--IVNG-GLV-VDL--GVRGFIPASLVEVHYV---EDFTEYKGKTLAVKIVELD-----REKN-RVILS HKAVVEQELDSKKKEAISSLKEGEIVE----GTVQR-LTDFGAFVNV------GGVDGLVHISQISHERVGQ PSDVLEQGQKV-KVKVLSVDADTQRISLSIKAAAPG--PWEHV-ADEIKVGDVREGTVNRIVTFGAFVE-IL PGVEGLVHVSQI--A-NRHVKNPNEVLEIGQEVKVKVLEVNAAEKRI-SLSIKEA----------------- ----------------------------L------------------EENNVTEDYSQ-------------- ------------YEP--------------------------------------------------------- --------------TSESATFQFSDIIGEQLKKLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_977946/1-382 30S ribosomal protein S1 [Bacillus cereus ATCC 10987]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-KM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------EEV---MD---SK-- ---------------------------E-------------------------------------------- --------------------------------------------LQ-V----------------G--DVVTG SVTKV-E--EKQ--VLV-NV--G-Y----------------KTDGV-IPISEL--ANVHIEKASDVV-ELDQ ILELKII-KLE--------END------LV----LSKRAV-------DAEKAWIELQEKFTSGH---VFDVT VKD--IVNG-GLV-VDL--GVRGFIPASLVEVHYV---EDFTDYKGKTLAVKIVELD-----REKN-RVILS HKAVVELELDSKKKEAISSLKEGDVVE----GTVQR-LTDFGAFVNV------GGVDGLVHISQISHERVEQ PSEVLEQGQKV-KVKVLSVDADTQRISLSIKAAQPG--PWENI-AGEVKAGDIREGIVKRLVTFGAFVE-IL PGVEGLVHVSQI--A-NRHVKNPNEVLEMGQEVKVKVLEVHVAEKRI-SLSIKEA----------------- ----------------------------------------------------------------------FE ENNVTEDYSQYEPNA--------------------------------------------------------- ----------------DSATFQLSDIIGEQLKKLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_082978/1-382 30S ribosomal protein S1 [Bacillus cereus E33L]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-KM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------EEV---MD---SK-- ---------------------------E-------------------------------------------- --------------------------------------------LQ-V----------------G--DVVTG SVTKV-E--EKQ--VLV-NV--G-Y----------------KTDGV-IPISEL--ANVHIEKASDVV-ELDQ TLELKVI-KLE--------END------LV----LSKRAV-------DAEKAWVELQEKFNSGH---VFDVT VKD--IVNG-GLV-VDL--GVRGFIPASLVEVHYV---EDFTDYKGKTLAVKIVELD-----REKN-RVILS HKAVVELELDSKKKEAISSLKEGDVVE----GTVQR-LTDFGAFVNV------GGVDGLVHISQISHERVEQ PSEVLEQGQKV-KVKVLSVDADTQRISLSIKAAQPG--PWENI-GGEIKAGDIREGVVKRLVTFGAFVE-IL PGVEGLVHVSQI---ANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRI-SLSIKEA----------------- ----------------------------------------------------------------------LE ENNVTEDYSQYEPNA--------------------------------------------------------- ----------------DSATFQLSDIIGEQLKKLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_843970/1-382 30S ribosomal protein S1 [Bacillus anthracis str. Ames]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-KM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------EEV---MD---SK-- ---------------------------E-------------------------------------------- --------------------------------------------LQ-V----------------G--DVVTG SVTKV-E--EKQ--VLV-NV--G-Y----------------KTDGV-IPISEL--ANVHIEKASDVV-ELDQ TLELKVI-KLE--------END------LV----LSKRAV-------DAEKAWVELQEKFNSGH---VFDVT VKD--IVNG-GLV-VDL--GVRGFIPASLVEVHYV---EDFTDYKGKTLAVKIVELD-----REKN-RVILS HKAVVELELDSKKKEAISSLKEGDVVE----GTVQR-LTDFGAFVNV------GGVDGLVHISQISHERVEQ PSEVLEQGQKV-KVKVLSVDADTQRISLSIKAAQPG--PWENV-GGEVKAGDIREGVVKRLVTFGAFVE-IL PGVEGLVHVSQI---ANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRI-SLSIKEA----------------- ----------------------------------------------------------------------LE ENNVTEDYSQYEPNA--------------------------------------------------------- ----------------DSATFQLSDIIGEQLKKLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_831277/1-382 30S ribosomal protein S1 [Bacillus cereus ATCC 14579]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-KM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------EEV---MD---SK-- ---------------------------E-------------------------------------------- --------------------------------------------LQ-V----------------G--DVVTG SVTKV-E--EKQ--VLV-NV--G-Y----------------KTDGV-IPISEL--ANVHIEKASDVV-ELDQ TLELKII-KLE--------EDD------LV----LSKRAV-------DAEKAWVELQEKFTSGH---VFDVI VKD--IVNG-GLV-VDL--GVRGFIPASLVEVHYV---EDFTDYKGKTLAVKIVELD-----REKN-RVILS HKAVVELELDSKKKEAISSLKEGDVVE----GTVQR-LTDFGAFVNV------GGVDGLVHISQISHERVEQ PSEVLEQGQKV-KVKVLSVDADTQRISLSIKAAQPG--PWENV-AGEIKAGDIREGVVKRLVTFGAFVE-IL PGVEGLVHVSQI---ANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRI-SLSIKEA----------------- ----------------------------------------------------------------------LE ENNVTEDYSQYEPNA--------------------------------------------------------- ----------------DSATFQLSDIIGEQLKKLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00236998/1-382 ribosomal protein S1 [Bacillus cereus G9241]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-KM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------EEV---MD---SK-- ---------------------------E-------------------------------------------- --------------------------------------------LQ-V----------------G--DVVTG SVTKV-E--EKQ--VLV-NV--G-Y----------------KTDGV-IPISEL--ANVHIEKASDVV-ELDQ ILELKVI-KLE--------EDD------LV----LSKRAV-------DAEKAWVELQEKFTSGH---VFDVT VKD--IVNG-GLV-VDL--GVRGFIPASLVEVHYV---EDFTDYKGKTLAVKIVELD-----REKN-RVILS HKAVVELELDSKKKEAISSLKEGDVVE----GTVQR-LTDFGAFVNV------GGVDGLVHISQISHERVEQ PSEVLEQGQKV-KVKVLSVDADTQRISLSIKAAQPG--PWENV-AGEIKAGDIREGVVKRLVTFGAFVE-IL PGVEGLVHVSQI---ANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRI-SLSIKEA----------------- ----------------------------L------------------EENNVIEDYSQ-------------- ------------YEP--------------------------------------------------------- --------------NADSATFQLSDIIGEQLKKLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00742826/1-313 SSU ribosomal protein S1P [Bacillus thuringiensis serovar israelensis ATCC 35646]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------------------------M KIIKL-E--EDD---LV------------------------------------------------------- ----------------------------------LSKRAV-------DAEKAWVELQEKFTSGH---VFDVT VKD--IVNG-GLV-VDL--GVRGFIPASLVEVHYV---EDFTDYKGKTLAVKIVELD-----REKN-RVILS HKAVVELELDSKKKEAISSLKEGDVVE----GTVQR-LTDFGAFVNV------GGVDGLVHISQISHERVEQ PSEVLEQGQKV-KVKVLSVDADTQRISLSIKAAQPG--PWENV-AGEIKAGDIREGVVKRLVTFGAFVE-IL PGVEGLVHVSQI--A-NRHVKNPNEVLEMGQEVKVKVLEVHAAEKRI-SLSIKEA----------------- ----------------------------L------------------EENNVIEDYSQ-------------- ------------YEP--------------------------------------------------------- --------------NADSATFQLSDIIGEQLKKLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_692721/1-376 30S ribosomal protein S1 [Oceanobacillus iheyensis HTE831]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MSE-ES----------------- ------------------------------------------------------------------------ ---------------------------------------------------------------KD---LQ-- ---------------------------T-------------------------------------------- --------------------------------------------ME-V----------------G--TTVTG TVVKL-E--DKQ--VLV-DI--G-Y----------------KTEGI-LPIGEL--SSLHVEATTDVL-TEGD TVTLKVK-KID--------DDE------II----LSKRAI-------DSETAWEELEQKYNSGE---AFDTT VKE--VVKG-GLV-VDV--GVRGFIPASLVETYYV---EDFSDYLNKTLKVKIADLD-----RSQN-RVILS HRAIVEDEEKNRKNDVLQSLEPGQVIE----GTVQR-ITNFGAFVDL------GGVDGLVHISQLAHEHVEK TSDVVSEGDKI-KVEVLSVDLDNERISLSHKNTLPG--PWANV-EEQVKVGSTIEGTVKRLVSFGAFVE-LL PGVEGLVHISQI--A-NRHIGTPQEVLEIGQTVQVKVLDVSEQDQRI-SLSIKEL----------------- -----------------------------------------------EEEQEAKEYKQYEK----------- ------------------------------------------------------------------------ --------------DDDQSGFQLGDFIGDKLDKYK------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_242502/1-383 30S ribosomal protein S1 [Bacillus halodurans C-125]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-EM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------NEV---TE---MK-- ---------------------------S-------------------------------------------- --------------------------------------------FS-V----------------G--DVVSG KVTKV-E--DKQ--AFV-DV--G-F----------------KVDGI-IPISEL--SSLHVEKVSDVL-SEGD ELELKVL-KVE--------DDE------LI----LSKRAV-------QAEKAWETLQAALDSGE---VIEAE VAD--VVKG-GLV-VDL--GVRGFIPASLVERHYV---EDFSDYKGRTLRLKVVELD-----KEAN-KLILS QRAVLDEEVEAKKKEVLASLQPGDVVE----GTVQR-LTDFGAFVDV------GGVDGLVHISQLAHHRVET PAEVVKEGDAV-KVKVLSVDPDSERVSLSIKETLPG--PWEQV-EGTIQPGDVIEGTVKRLVSFGAFVE-VA PGVEGLVHISQI--A-NRHIGTPGEVLSEGERVQAKVLDVNISEKRI-SLSIREL----------------- ----------------------------LDDA---------------------------------------- ------GSNQSDREV--YE-ST-------------------------------------------------- --------------NEESSGFSLGDMIG----------------------------------DELKKYK--- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_175370/1-384 30S ribosomal protein S1 [Bacillus clausii KSM-K16]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MVE-EM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------DGM---DE---IK-- ---------------------------S-------------------------------------------- --------------------------------------------FS-V----------------G--DIVTG KVTKV-E--DKQ--AFV-DV--G-F----------------KVDGI-VPISEL--SSLHVEKASDVL-SVDD ELELKVT-KVE--------DDE------LI----LSKKAV-------QAEKAWEQLEEAYEKGE---VIEAE VAE--VVKG-GLV-VDV--GVRGFIPASLVERHYV---EDFSDYKGKPLRLKVTEID-----KDNN-KLILS QRAVLDAEIEEKKKQVLHSLSTGDVVE----GKVQR-LTSFGAFVDV------GGVDGLVHISQIAHERVEH PSDVLSEGQEV-RVKVLSVDPDSERVSLSIKEMLAG--PWENI-ESKFSAGDIVTGTVKRLVSFGAFVE-IA PGVEGLVHISQI--S-KRHIGTPQEVLEEGQQVQAKVLEVSEADRRV-SLSIREA-------SEE------- -----------------------------------------------QERKETRAYEKPA------------ ------------------------------------------------------------------------ --------------NDEPSGFSLGDMIGDQL-------------KKYRDQ---------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_148078/1-387 30S ribosomal protein S1 [Geobacillus kaustophilus HTA426]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------------VQ---VN-- ---------------------------V-------------------------------------------- --------------------------------------------YE-V----------------G--DIVRG KVVKL-E--DKQ--VLV-EV-EN-S----------------KQSGI-IPISEL--SNLHIEKPSDAV-AVGD EVTAKVK-KVE--------EGKDGEEGLLI----LSKRAV-------DAERAWEDLERKFASGE---TFETV IKD--IVKG-GLV-ADV--GVRGFIPASLVEPHYV---EDFSDYKGKTLAVKVVELD-----REKN-RVILS HRAVVEEEQARQQKELLSRLEPGQVLD----GVVRR-IADFGVFVDV------GGFDGLVHISQLSHTRVAH PSEVVKEGDAV-KVKVLAVDPEQGRLSLSIKEALPG--PWEGL-GEKVKPGDVVTGTVKRLASFGAFVE-VF PGVEGLVHVSQI--A-NRRIGSPHEVLKEGDVVKAKVLDVNEADHRL-SLSIRAL----------------- ----------------------------LEE----------------EAAAPAEDYSQ-------------- -------------------------------------------------------------------YTRTS ET----------------RGFQLGEVIGEQLKKLK------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01172000/1-385 30S ribosomal protein S1 [Bacillus sp. NRRL B-14911]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MSE-EM----------------- ------------------------------------------------------------------------ ---------------------------------------------------------------NQSEEMN-- ---------------------------SIEVKN--------------------------------------- --------------------------------------------FE-V----------------G--DRVTA KVTKV-E--EKQ--VVV-DI-QD-S----------------KLDGI-IPISEL--SSLHIEKAEDAV-AEGD ELDLEVL-KVE--------EEA------LI----LSKRKV-------DAVKAWDTLEEKFNSGE---VFDAE IKD--VVKG-GLV-VDL--GVRGFVPASLVEAHFV---EDFSDYKGRTLSFKIVELD-----KEKN-RLILS HRAVVEEEKGRQKQDILANLQADQVLD----GTIQR-ITDFGAFVDI------GGIDGLVHISQLSYEHVEK PSDVVEEGQKV-QVKVLSVDRDNERISLSIKETLPG--PWSDI-AEKAPKGSTLDGVVRRLVSYGAFVE-VF PGVEGLVHISQI--S-HKHIGTPHEVLEEGQQVQVKVLDVNENDQRL-SLSIKDL----------------- -------------------------------------------------EEKEAEYDTSYEM---------- ------------------------------------------------------------------------ --------------PEETKGFQLGEMIGDQLKNLKK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_079590/1-382 30S ribosomal protein S1 [Bacillus licheniformis ATCC 14580]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------QID--------VQ-- ------------------------------------------------------------------------ --------------------------------------------VPEV----------------G--DVVKG IVTKV-E--DKH--VDV-DI-PN-C----------------KQTGI-IPISEL--SSLHVEKASDVV-NVDD ELELKVT-KVE--------DDA------LI----LSKRAV-------DADRAWEDLEKKFESKE---VFEAE VKD--VVKG-GLV-VDI--GVRGFIPASLVEAHFV---EDFTDYKGKTLTLIVVELD-----RDKN-RVILS HRAVVEKEQSERKQEFLQTLEAGQVLE----GKVQR-LTDFGAFVDI------GGIDGLVHISQLSHSHVEK PSDVVEEGQDV-KVKVLSVDRDNERISLSIKETLPG--PWSNI-GEKVKPGDVLDGKVQRLVSFGAFVE-VL PGVEGLVHISQI--S-NKHIGTPHEVLEEGQDVKVKVLDVNEEEERI-SLSMKEL-------EEN------- -----------------------------------------------TDKAEQEDYRQYQA----------- ------------------------------------------------------------------------ --------------KEESSGFQLGEMIGDKLNKLK------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_390169/1-382 30S ribosomal protein S1 [Bacillus subtilis subsp. subtilis str. 168]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MTE-EM----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------Q-----ID---VQ-- ---------------------------V-------------------------------------------- --------------------------------------------PE-V----------------G--DVVKG IVTKV-E--DKH--VDV-EI-IN-V----------------KQSGI-IPISEL--SSLHVEKASDVV-KVDD ELDLKVT-KVE--------DDA------LI----LSKRAV-------DADRAWEDLEKKFETKE---VFEAE VKD--VVKG-GLV-VDI--GVRGFIPASLVEAHFV---EDFTDYKGKTLSLLVVELD-----RDKN-RVILS HRAVVESEQANKKQELLQSLEVGSVLD----GKVQR-LTDFGAFVDI------GGIDGLVHISQLSHSHVEK PSDVVEEGQEV-KVKVLSVDRDNERISLSIKDTLPG--PWNQI-GEKVKPGDVLEGTVQRLVSFGAFVE-IL PGVEGLVHISQI--S-NKHIGTPHEVLEEGQTVKVKVLDVNENEERI-SLSMREL-------EETPK----- -----------------------------------------------ADQEDYRQYQAK------------- ------------------------------------------------------------------------ --------------EETSTGFQLGDLIGDKLNKLK------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_818762/1-396 Ribosomal protein S1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------MSETNN----------------- ------------------------------------------------------------------------ ---------------------------------------------------------ELLAALESADQIK-- ------------------------------------------------------------------------ -----------------------------------------------V----------------G--DVVTG EVLAVDN--DNQ--AVI-----G-L--------------HTGEEGV-VPAREY--SDDRNINLADEL-KVGD SVEAVVISNVT--------SDK---EGVSYL---LSKKRL-------EARKAWENL--SFGEGD---TVDAK VIN--AVRG-GLV-VDVN-GVRGFVPASMVADRFV---SDLNQFKNKDIKAQVIEID-----AAKA-RLILS RKAVAAQERAAQLAEAFEKLSVGEVVE----GKVAR-LTDFGAFVDL------GGVDGLVHVSEISHDRVKN PADVLTKGETV-NVKILALDAEKGRISLSIKATQPG--PWDKV-AEEAPAGTVLEGTVKRVKDFGAFVE-IF PGIEGLVHVSQI--S-HKRIENPSEVLKSGDKVQVQVLDVKPAEERI-SLSMKAL----------------- -------------------------------------------------EEKPEREDRGNSKDSSASRADIA AYK--------------------------------------------------------------------- --------------QQDDSAATLGDLFDGKF----------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >AAA77669/1-406 ribosomal protein S1 homolog. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------GVNCRRTLDVMSETNN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------AAL---ESA--AD-- ---------------------------Q-------------------------------------------- --------------------------------------------IK-V----------------G--DVVTG ELLAIDN--DNQ--AVV-GL-S--T----------------GEEGV-VPAREY--SDDRNINLADEL-KIGD TIEAVVISNVT--------SDK--EGVAYL----LSKKRL-------DARKAWENLS--FAEGD---TVDAK VIN--AVRG-GLI-VDVN-GVRGFVPASMVAERFV---SDLNQFKNKDIKAQVIEID-----PANA-RLILS RKAVAAQERAAQLAEVFSKLSVGEVVE----GTVAR-LTDFGAFVDL------GGVDGLVHVSEISHDRVKN PADVLTKGDKV-DVKILALDTEKGRISLSIKATQRG--PWDEA-ADQIAAGSVLEGTVKRVKDFGAFVE-IL PGIEGLVHVSQI---SNKRIENPSEVLKSGDKVQVKVLDIKPAEERI-SLSMKAL----------------- ------------------------------------------------EEKPEREDRRGNDGSASRADIAAY K----------------------------------------------------------------------- --------------QQDDSAATLGDIFGDKL----------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >AAA97575/1-352 ribosomal S1 protein. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G------- ------E------------------------------------EGV-VPAREY--SDDRNINLADEL-KIGD TIEAVVISNVT-------SDKE----GVSYL---LSKKRL-------DARKAWENL--SFAEGD---TVDAK VIN--AVRG-GLI-VDVN-GVRGFVPASMVAERFV---SDLNQFKNKDIKAQVIEID-----PANA-RLILS RKAVAAQERAAQLAEVFSKLSVGEVVE----GTVAR-LTDFGAFVDL------GGVDGLVHVSEISHDRVKN PADVLTKGDKV-DVKILALDTEKGRISLSIKATQRG--PWDEA-ADQIAAGSVLEGTVKRVKDFGAFVE-IL PGIEGLVHVSQI--S-NKRIENPSEVLKSGDKVQVKVLDIKPAEERI-SLSMKALEEKPERE---------- ----------------------------DRRGNDGSASRADIA-----------AYKQQDDSAA-------- ------------------------------------------------------------------------ -----------------------------------------------------------TLGDIFGDKL--- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_815265/1-403 ribosomal protein S1 [Enterococcus faecalis V583]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MT-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------EDKQVANNETM---EDA--MN-- ---------------------------SVQE----------------------------------------- --------------------------------------------VS-V----------------G--DIVKG EVLAI-E--DKQ--VVV-GI-EG-A----------------GVEGV-VPAKEL--STLPVEDVHELV-KVGD VLDLVVITSIG--------KDK--ENGSYL----LSKRRL-------DAKKVWEEIEQDFQAGK---VIEAP VTN--VVKG-GLV-VDV--GVRGFVPASMVEDHFV---ADFSEYKGQTLAFKIIEIE-----PSEN-RLILS HKAVVEAEKESKKEELLSSLHDGDVVE----GKVAR-LTDFGAFIDL------GGVDGLVHVSEIAHQHVGK PSDALTVGEDV-QVKILSINPEEGRISLSIKETLPG--PWTDI-ETKAAAGTVLDGTVKRLTSFGAFVE-VF PGVEGLVHISQI--S-HKHIATPHEVLHEGDQVQVKVLEVNPEEHRI-ALSIKAL-------EPKP------ ------------------------------------------------------------------------ ---------ESQEEP---------------------------KEEQEYEL---------------------- --------------PEENTGFTMGDILGDALSDAKEEE---------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_806599/1-439 Ribosomal protein S1 [Lactobacillus casei ATCC 334]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MSDNNVNE--NTE-TM----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DAL---KS---VT-- ---------------------------T-------------------------------------------- --------------------------------------------VK-I----------------G--DTVKA DVLAV-E--DKQ--LIV-GI-EG-T----------------GVEGV-VPIKEL--STQPIDDIHDVA-KVGD KLDLVVLSTVG--------KDK--ENGQFL----LSKRRL-------EAQKVWKEIQAKYEAGE---TITAP VTS--VVKG-GLV-VNA--GVRGFVPASMVEDHFV---EDLSQYKGKELEFKIIEIE-----PSEN-RLILS HRAIVEASKAEARKEIFAKIQPGDTVE----GKVAR-LTNFGAFVDL------GGVDGLVHVSEISFDHVDK PSDVLKVGQEI-KVKVLNVDPDRNRISLSIKATLPQ--PWDDI-EEKAPAGSVLTGTVKRLTTFGAFVE-VF PGVEGLVHISQI--S-HEHVATPADVLKEGQEVQVKVLSVDPDAHRL-ALSIKAL-------QERPAGSEEE SHEGG----------------------------------------------------------------NSS RDNSDRGDRRRSSRP----------RRGNDRHQSTSIPAEY------------------------------- --------------QQDDSGFSLGDILGDALKDVAKGNDDQD----------------DNK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_395628/1-403 30S Ribosomal protein S1 [Lactobacillus sakei subsp. sakei 23K]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MNDANLNDTQSSE-TM----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AAL---DS---VH-- ---------------------------E-------------------------------------------- --------------------------------------------VK-I----------------G--DVVKG EVLVI-E--DRQ--VIV-GI-EG-T----------------GVEGV-VPQKEL--SSQPIETLTDAV-KVGD QFDLVVIATIG--------NDK--ENGSYL----LSKRRL-------EARKVWAEIEQKFENKE---TIKAT VLN--VVKG-GLV-VDA--GVRGFLPASMLSDRFV---RDLNSFKGQELELQIIEIE-----PSEN-RLILS RKALVEQERQAQLKAVFEKLLPGDIVE----GEVAR-LTNFGAFVDL------GGVDGLVHVSEISYDHINQ PSDVLEVGQNV-KVKILSLDQEKGRISLSIKDTQPG--PWDDI-AEKAPVGSTLEGTVKRLTTFGAFVE-VF PGVEGLVHISQI--S-HQHIATPNDVLEEGQTVQVKVLSVDPEQQRL-GLSIKAL-------QEKP------ -----------------------------------------------AGAK------------------DSE QEDVAPSDYEMPEEE--------------------------------------------------------- ------------------TGFSIGDMLGKAL---------------------------DEK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_535780/1-399 SSU ribosomal protein S1P [Lactobacillus salivarius subsp. salivarius UCC118]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------MSMSETEA----------------- ------------------------------------------------------------------------ ---------------------------------------------------------NLL---EEA--LN-- ---------------------------SVKE----------------------------------------- --------------------------------------------VK-V----------------G--DVVKG EVLTIDE--SNQ--VIV-GI-EN-T----------------GVEGV-VPVREL--SVNADKVAD--TYKAGD MLDLVVIARIG--------SDK--EGGSYL----LSQRRL-------EARRVWNEIEDKFKAGE---TIKAP VTQ--VVKG-GLV-VDA--GVRGFVPASMVSDHFV---EDLNQFKGQELELKIVEIE-----PSDN-RLILS RKELVQAEREAKRQAVMEKLVAGDVVE----GKVAR-LTNFGAFIDL------GGVDGLVHVSEISYERVNK PADALKVGQEV-KVKVLSVDAEKGRISLSIKQTLPE--PWEQV-PEQVAEGDVLEGTVKRLTSFGAFVE-VL PGVEGLVHISQI--S-HKHIATPNEVLTSGEKVQVKVLSVDAADHRL-ALSIKAL-------QEKP------ ------------------------------------------------------------------------ ------AVEKKEAAP-----------------------------KKEEKVEI-------------------- --------------PEEDTGFTLGDIVGDQLK--------------------------DEQ----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_804576/1-402 Ribosomal protein S1 [Pediococcus pentosaceus ATCC 25745]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MAENDVN---QNS-DL----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------NAI---NS---VE-- ---------------------------E-------------------------------------------- --------------------------------------------VK-V----------------G--DVVTG EVLDIDD--DRQ--VIV-GI-QG-A----------------GVEGV-VPLREL--STQHIDNISDEV-KIGD ELELVVISRIG--------DDK--EGGSYL----LSRKRL-------LARKVWKEIEEKAANNE---ELDVP VTQ--VVKG-GLV-VDA--GVRGFIPASMIENRFV---DDLNAYKGQTLKVKIIEVK-----PEDN-RLILS HKAVLNAEREAKRGEVLASIKEGDVVT----GKVAR-LTNFGAFVDL------GGIDGLVHISEISYQRVDK PSDVLKAGEEV-QVKVLSVDAEKERVSLSIKQTQPG--PWDNI-EENAPEGAVLDGKVKRLTDFGAFVE-VF PGVEGLVHISQI--S-HKHIATPADVLKEGQDIKVKVLEVHPAEHRL-ALSIKAL-------EEAPKNEKKT EAPAAD------------------------------------------------------------------ -----------------FSKDM-------------------------------------------------- --------------PEEATGFTLGDIIGKSLDDSEK------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01164259/1-416 RNA binding S1 [Lactobacillus reuteri JCM 1112]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MAENNE----NKN-DM----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------EAL---DS---IE-- ---------------------------Q-------------------------------------------- --------------------------------------------VK-V----------------G--DVVKG EVLAIDD--DRQ--AIV-GI-KD-A----------------GVEGV-VPAKEL--STKPVEDINDAV-KVGD ELDLVVISKIG--------NDK--ENGSYL----LSHRRL-------EARKVWDDIQKKFDEGE---HITAK VTQ--AVKG-GLV-VDA--GVRGFVPASMITDHYV---EDLNQFKGQELEFKIVEIE-----PSEN-RLILS HKEIIQAQHEKAAEKVFAELQPGDVVE----GKVAR-MTNFGAFIDL------GGVDGLVHVSEISYDHVDK PSDVLTAGQDV-KVKVLSVDPERERISLSIKQTLPG--PWDDI-EEKAPVDSVLTGTVKRLTSFGAFVE-VF PGVEGLVHISQI--S-HKHIATPADVLKPGQEVQVKVINVDPEHQRL-GLSMKAL-------EERPKED-EN NNNNGENYRGR------------------------------------------------------------R RSRRNNNNRSFMNNA--------------------------------------------------------- --------------PEEESGFSMGDLIGDKLKDLRN------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_785427/1-429 ribosomal protein S1 [Lactobacillus plantarum WCFS1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MSENENSQ--E-KN----------------- ------------------------------------------------------------------------ ---------------------------------------------------------ELL---DALNSVE-- ---------------------------E-------------------------------------------- --------------------------------------------VN-V----------------G--DVVKG EVLAIDD--DKQ--VIV-GI-QG-T----------------GVEGV-VPLKEL--STQRVDDVNEAA-KVGD VLDLVVISRIG--------SDK--ENGSYL----LSHRRL-------EARKVWDDVEKEYEAGH---TIKAP VTQ--VVKG-GLV-VDA--GVRGFIPASMIDDHYV---EDLNAYKGQELELKIIEIE-----PSEN-RLILS HRAVVEKQREAQREEALKTLQAGDVVE----GKVAR-LTNFGAFVDL------GGIDGLVHVSEISYERVEK PADVLKVGQEV-TVKILSVDADRERVSLSIKATLPE--PWDGI-EEKAPQGAVLDGKVKRLTSFGAFVE-VF PGVEGLVHISQI--S-HQHIATPNDVLKVGQEIKVKVLDVRPDEKRL-ALSIKAL-------EEKPQTADDD NESQPERRSNNNRRRNN------------------------------------------------------N RDNRTASERSTANAP--------------------------------------------------------- ---------------EESTGFTLGDLIGDELKNAESNN--------------------DEN----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_794951/1-434 Ribosomal protein S1 [Lactobacillus brevis ATCC 367]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MSENGTSQNNE-NN----------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL---DALNSID-- ---------------------------T-------------------------------------------- --------------------------------------------VK-V----------------G--DVVKG EILAIDD--DQQ--AIV-GI-AD-T----------------GVEGV-VPKKEL--STKPVDDIKSVI-KVGD VLDLVVISRIG--------SDK--EGGSYL----LSQRRL-------EARKVWDDIQKEFEAGN---TLTAP VTQ--VVKG-GLV-VDA--GVRGFVPASMVSDHFV---EDLAQFKGQTLEFKIVEIE-----PSEN-RLILS HRAIVEKQRAAQKEEIMAKLTAGDVVD----GKVAR-LTNFGAFVDL------GGVDGLVHVSEIAFERVEK PSDVLKVGQDV-KVKVLSVDADRDRISLSIKQTLPE--PWDGI-EDKAPQGSTLDGTVKRLTSFGAFVE-VF PGVEGLVHISQI--S-HQHIATPADVLKVGQEIKVKVLDVRPEDHRL-ALSIKAL-------EEKP------ ----------------------------QSGDDDNENRNTNRSRSNNNGGNNNRRRSNRNNAETSTANAPEE STGFSLG-------------DL-------------------------------------------------- ----------------------IGDSLKKDMEDNENN----------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01576096/1-672 hydroxymethylbutenyl pyrophosphate reductase [Clostridium cellulolyticum H10]. ------------------------------------------------MELVIANSAGFCFGVNNAVKIVFE LATKSDHKIYTLGPIIHNDQVVQKLTKHGVTTIDNPEEAVAPAKVVIRAHGVGPKIIEGLKNRGLEVVDASC RYVEKIHSLVNKKYKEGYQIIIAGDKTHPEIIGINGWCDNSAFIIEDEYNVD-KLPDIKKKICVVAQTTFIR EKWEKIILRLNKRFENVLKFDTICNATDKRQTEAEKISKIVDMVLVIGGNNSSNTNKLYQICKTNCDNTFKI QTADDIPPVDIKKIKKIGITAGASTPDWVIKEVIHKMSELDRQDMEMSFA-------DAF---ESS--LV-- ---------------------------T-------------------------------------------- --------------------------------------------LT-T----------------G--QITKG KIIGY-N--NNE--VFI-DM--G-Y----------------KSDGI-IPMQEF--SDDPDFNPEKSL-KVGD EIDVFVV-RVN--------DGE----GNVL----LSKKRV-------DAVKGLEVIERAYENKQ---PVKVK ITE--KVNG-GVI-GNAS-GVRVFIPASQISDRFV---KDLSEFVKQVLQVEIIELN-----KQKR-KVVGS ARILIEKNKEAASSLIWDSIEIGKTYK----GQVKS-LMDFGAFVDI------GGVDGLVHLSELSWNKIRH PSEVVKVGDEI-IVSVLDFDKEKKRISLGYKKQSDN--PWIKA-AEKYQVGNVVSGKVVRLVPFGAFVE-LE EGIDGLVHISQI--S-SVRLGKPGDALKVGQQVDAKIIEFDTESKKI-SLSIKEV----------------- ------------------------------------------------------------------------ -------------NP---------------------------IDPEGAK---------------KEESIPAA EV------------EELPNEH-----------------------VEEMTN---------------------- ------------------------TIGESIKE---------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_00910062/1-384 RNA binding S1 [Clostridium beijerincki NCIMB 8052]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MSNEELESNM----------------- ------------------------------------------------------------------------ -------------------------------------------------S-------ELL---NQYDVKR-- ------------------------------------------------------------------------ --------------------------------------------LN-R----------------G--DVLKG KVIDV-N--DKE--VSV-NI--D-Y----------------AFDGL-IAKEEV--SIDDRDPME--VVSKDD EIYVYVI-SPN--------DGE----GYVE----LSLIKA-------LEIKDREELSECFKEKK---NIKVH VKE--ETKG-GVI-AYYG-NVRVFIPGSLASRERI----ELSSLVGRDLDVRITELD-----FKNK-KVIAS RRIIEEEEYNKNKKNIWDNLKEGEKRN----GVVKK-IVKFGAFVDI------GGVEGLIHLSDLSWERVNK PEDIVKEGDNV-EVFIGNVDRKNERLSLILKDVTKE--PWTVH-GKDINEGDIFEGKVIRLTTFGAFVE-LF DGIEGLVHITEI--T-DEHIAKPSDVLEANQKVKVKVLSVNREEKRI-ALSIKEA----------------- -----------VETNKEYLDYID------------------------------------------------- ------------------------------------------------------------------------ --------------NSDESGTSLGDLLKGFKFE--------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_699426/1-378 30S ribosomal protein S1 [Clostridium perfringens SM101]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------MSENLTMS-EL----------------- ------------------------------------------------------------------------ -------------------------------------------------M-------DSF---E----LK-- ---------------------------H-------------------------------------------- --------------------------------------------FH-K----------------G--EIVKG KVISV-K--NDE--IIV-NI--G-H----------------FADGV-VPRNEI--SNDKNFDINSI--NVDD DIFVMVL-SGD--------DGE----GNVL----LSKKRA-------DAIKVWDDLKEAFEKEK---SIKVS LKE--VVKG-GIV-GDFN-GLRVFMPASQCAGRRI---ENLEELVGKTLEVRVIEFN-----KENR-KVVVS RRIIDEEIRNNEKKALWSSIKEGEKRK----GKVTR-LAKFGAFVDI------GGVEGLVHLSDMSWSRVHK PEEVVSVGDEV-EVFVSEVDMDRERIALSLKDVIKN--PWETL--EGLKVGDVVSGKVTNFIKVGAFVE-VL PGIEGLVHISEI---TDENIAKPSDILELGQEVKVKILNIDDENKKM-SLSIKDA----------------- ------------------------------------------------------------------------ ------------------------------------------VETSNEYIQY-------------------- --------------NDEEEGYSLADLFKGLNL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_563066/1-378 30S ribosomal protein S1 [Clostridium perfringens str. 13]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------MSENLTMS-EL----------------- ------------------------------------------------------------------------ -------------------------------------------------M-------DSF---E----LK-- ---------------------------H-------------------------------------------- --------------------------------------------FH-K----------------G--EIVKG KVISV-K--NDE--IIV-NI--G-H----------------FADGV-VPRNEI--SNDKNFDINSI--NVDD DIFVMVL-SGD--------DGE----GNVL----LSKKRA-------DAIKVCDDLKEAFEEEK---SIKVS LKE--VVKG-GIV-GDFN-GLRVFMPASQCAGRRI---ENLEELVGKTLEVRVIEFN-----KENR-KVVVS RRVIDEEIRNNEKKALWSSIKEGEKRK----GKVTR-LAKFGAFVDI------GGVEGLVHLSDMSWSRVHK PEEVVSVGDEV-EVFVSEVDMDRERIALSLKDVIKN--PWETL--EGLKVGNVVLGKVTNFIKVGAFVE-VL PGIEGLVHISEI---TDENIAKPSDILELGQEVKVKILNIDDENKKM-SLSIKDA----------------- ------------------------------------------------------------------------ ------------------------------------------VETSNEYMQY-------------------- --------------NDEEEGYSLADLFKGLNL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_696828/1-378 ribosomal protein S1 family [Clostridium perfringens ATCC 13124]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------MSENLTMS-EL----------------- ------------------------------------------------------------------------ -------------------------------------------------M-------DSF---E----LK-- ---------------------------H-------------------------------------------- --------------------------------------------FH-K----------------G--EIVKG KVISV-K--NDE--IIV-NI--G-H----------------FADGV-VPRNEI--SNDKNFDINSI--NVDD DIFVMVL-SGD--------DGE----GNVL----LSKKRA-------DAIKVWDDLKEAFEEEK---SIKVS LKE--VVKG-GIV-GDFN-GLRVFMPASQCAGRRI---ENLEELVGKTLEVRVIEFN-----KENR-KVVVS RRVIDEEIRNNEKKALWSSIKEGEKRK----GKVTR-LAKFGAFVDI------GGVEGLVHLSDMSWSRVHK PEEVVSVGDEV-EVFVSEVDMDRERIALSLKDVIKN--PWETL--EGLKVGDVVSGKVTNFIKVGAFVE-VL PGIEGLVHISEI--T-DENIAKPSDILELGQEVKVKILNIDDENKKM-SLSIKDA----------------- ------------------------------------------------------------------------ ------------------------------------------VETSNEYMQY-------------------- --------------NDEEEGYSLADLFKGLNL---------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01361435/1-378 RNA binding S1 [Clostridium sp. OhILAs]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------MSNDMQ-NL----------------- ------------------------------------------------------------------------ -------------------------------------------------M-------EEI---EKS--MV-- ---------------------------R-------------------------------------------- --------------------------------------------LR-R----------------G--EIVSG KVINV-T--NNE--IFV-NV--G-Y----------------KSDGI-IPKDEI--SNDITVQPSELV-KEGD EIKVYVL-SLD--------DGD----GNVL----LSKKRV-------DLTKGWDDLEKIKEAES---LVETK VIE--AVKG-GVV-AIAR-GVRCFIPASQLSDRFV---DNLKSFEGKSFTTKVMEID-----RKRN-KAVLS RKVVLAEENKHKKVELFSKLDKGMQIS----GEVKR-ITDFGAFVDI------GGIDGLVHISDLSWGRVKH PSEVVTIGDIV-KVVVLDFDKDKGKVSLGLKQTQKQ--PWDDV-ELKYPIGSIVEGKVVRLVDFGAFVE-LE VGLDGLVHISQI--S-EKHIAKPSEELHIGQKVKVKVLDVKPEEKRI-SLSITAA----------------- ------------------------------------------------------------------------ -------------------------------------------DEKEEAIEY-------------------- --------------VAENSPTTIGEILE------------------------------ENK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00801432/1-383 RNA binding S1 [Alkaliphilus metalliredigenes QYMF]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------MSHDME-EL----------------- ------------------------------------------------------------------------ -------------------------------------------------M-------EEI---EKS--LI-- ---------------------------R-------------------------------------------- --------------------------------------------PK-R----------------G--EVVTG KVIQV-S--DKG--ITV-NI--G-Y----------------KADGI-VPRDEI--SNDPTITPQDVA-KADD EISVYII-KTD--------DGE----GNVL----LSTKRV-------EHTKGWEDLEKIHDTES---LVESK VVE--SVKG-GVI-AIAR-GIRCFIPASQLSDRYV---DDLKTFVGKSFNAKVIEID-----RQKN-KAVLS RKEVLQQENKEKKADVFAKLEKGMQIR----GEVKR-LTNFGAFVDI------GGIDGLVHISELSWGRVKN PSEVVSVEDQV-EVKVIDFDETTGKVSLSIKQTQPE--PWTLI-ADKFKAGDILEGKVVRLVDFGAFVE-LM PGLDGLVHISQI--S-EAHIAKPSEELHVGQNVNVKVLDINIDGKRI-SLSMTAA-------QED------- -----------------------------------------------STENEPTEY---------------- ------------------------------------------------------------------------ --------------TDEDNNVTIGDIIDMN----------------------------DKK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_782133/1-387 SSU ribosomal protein S1P [Clostridium tetani E88]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MSKINEDLTM----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------NMIEEIDKN--MK-- ---------------------------K-------------------------------------------- --------------------------------------------VK-E----------------K--DIVKG KVISV-S--EDE--VLI-NI--G-Y----------------VADGI-IKKSDL-----EDIDFKEEF-KKDE EVYVYVV-KLN--------DGE----GNVI----LSKRIA-------DKIRTLDKLEKDFKEGN---IFKIK IEE--IVKG-GVI-THIN-GVRAFIPASHISSKFV---QDLNEFLGKEKDVKVIEFN-----RKDN-KLVLS AKEVEDEKLTKKREELWKTLKEGEKIN----GKVVR-LVKFGVFVDI------GGIEGLVHLSDLSWKRVNN PSDIVKEGDEV-EVFILNVDKKRERLGLALKDIKED--PWKKA-LDNHKIGTVEHGTVVKLVEFGAFVE-LK DGLEGLLHISEI--S-EERILKPEEVLKIGDKIKVKILDINKENRKM-SLSKKAA----------------- ---------------------------------------------EDKSSAEMEKY---------------- ------------------------------------------------------------------------ --------------SDKEEGVSLGEILGDKLKDFKF------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_877456/1-387 rpsA [Clostridium novyi NT]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------MEKDKVQEE-SM----------------- ------------------------------------------------------------------------ -------------------------------------------------Q-------DIMEAIDKT--ME-- ---------------------------P-------------------------------------------- --------------------------------------------IY-V----------------G--DIIEG EVISV-S--QNE--VLV-NI--G-Y----------------ITDGV-IKKNEV---CSDDEELKDIL-KSGD KVDVYIV-KIN--------DGE----GNVL----LSKKKA-------DSVKAWDTLKDAFKNGT---ILEAK VDE--VVKG-GVV-SYIN-GIRAFIPASQISASFV---KDVKVFLGKTLKVKVIEFD-----GKKN-KVVLS AKEVELKEIENKKQKVLASLKKGEKRS----GVVRR-LAKFGAFVDL------GGVDGLIHNSDLSWERVNN PSDVVKVGDKV-EVYVLDFHKDTGKIALSLKNVEED--PWNNV-SSKFKVNDIVEGKVVKLLDFGAFVE-IL GGVEGLVHITEI--T-DENIAKPSDVLKKGDKVKVKILEINENDKRI-ALSIKDA----------------- ---------------------------------------------ENKVAEEIEKYNDEDEGN--------- -----------------FA---------------------------------------------FADLLKNF KF---------------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_972681/1-811 cytidylate kinase/ribosomal protein S1 [Treponema denticola ATCC 35405]. ----------------------------------MIIAIDGPAGSGKSTLAKMLAEHLNITFMNTGSFYRAL ALAVLRSFGGGNDGSGGQTPD------------------------------LSDEKKWTSFAEKTELFYING SMFLGNENVEAYLRSDAVESIVAPLSAIVPIRHILNKKIREEAAKTGAVCEGRDM----------------- ------------------------------------------------------------------------ -------------------------------------------------TTVVFPDADIKFYLDAS--VEAR AKRRFDQGTSNLSPEEIKKTILERDEVDKNKKEGSLKVAPDAVYLDTSDLNINEVYEKMLAEVS--AIISAS KS-ENINNKGLSMEKMEVVKDVEKDSNGNIQAQLQEEYLNNFEAPE-A----------------G--TIKEG YVVAV-N--NGT--VFV-DV--G-G----------------KSEGH-IPLDEF--------DEE--P-KVND KVTVLIE-KTE--------SSN----GHLS----VSKLKA-------DRLILQKEFKQAYADKT---PIDGT IAK--QVRA-GYE-VKLGGGLTAFLPLSQADVSRV---EKPETLVGVKSKFYIEKLSFNS--RSGE-NIVVN RRKYMEGRTEKERDAFFQNTKIGDTVK----GTVKS-FTSFGAFIDL------GGFDGLLHINDMSWGHVTR PKDFVKKGEEI-ELKVIRLDPENKRINLSLKHFTQD--PWLQF-EDKFHVEDIVTGTVTKTTDFGAFIE-LD EGIEGLAHISEF--SWVKKINKPEDILKPGDKVTCMILGYDIQAGRV-SLGLKQV-------TDNPWDTIEE RYPVGTRLTRKVVKITNAGAFIS-----LEEGIDGFLHADDISWIK-RVKHPGSELEVGKEIEVIVIECDAE SRRIRLGIKQLTDDP--WE-KF---GAAYKVGSIVEGEVSS-ITDFGVFVKV---P----GD--IEGLIHKQ NLVESRDETP----EEALAKYAVGDKIKAVVIEINPRNKKTAFSIKDFKR--------KQQQEEISQYM--- -------------STEQEDDDSSYTLGDLLKN----------------KPE--------------------- ------------------------------------------------------------------------ ------------ >NP_218720/1-863 ribosomal protein S1 (rpsA) [Treponema pallidum subsp. pallidum str. Nichols]. MHGGGERERSFVHPRTRCVAVRARTVLQCRPMGTVIIALDGPAGSGKSSVCRLLASRLGAQCLNTGSFYRAF TLAALRRVSELAVQACSPSPDPDAAVGCAAVPHATNLDTSYAPLTAQKKVALFDEAYWVSFARTVALSYRAG VMYVGEENVESLLRSDEVESAVSYFAAMPAIRAIMTGKIRSAVCGARVVCEGRDL----------------- ------------------------------------------------------------------------ -------------------------------------------------TTVVFVDADLKCYLDAS--IEAR VARRWAQGTSRLSKQELEQRMRARDAHDRARTVGGLRCAPDALYVDTSCLTIEEVCERIAREAHRRALWGGE RSVENQEGKGTPL----------------VPRQLQERY--SFEAPE-P----------------G--SVRMG TVVQV-N--AGT--VFV-DI--G-G----------------KSEGR-VPVEEF--------EAP--P-KAGD GVRVYVE-RVT--------PYG----PEL------SKTKA-------DRLGLKVKLRDAERDGT---PVEGR IVRLTEKKS-GFE-VDLGAGMMAFLPISQSDCQKV---DAPESLIGLTSKFYIERISQSKQHRGND-NIVIN RRRYLEERARQAREEFFNSVHIEDSVS----GVVKS-FTSFGAFIDL------GGFDGLLHVNDMSWGHVAR PREFVKKGQTI-ELKVIRLDQAEKRINLSLKHFQPD--PWLEF-ENKFGVNDVVKGRVTKIADFGAFIE-LA EGIEGLAHISEF--SWVKKTSKPSDMVKIGDEVECMILGYDIQAGRV-SLGLKQV-------TANPWEEIEA RYPVGARFTRRIVKVTNAGAFIE-----MEEGIDGFLHVDDLSWVK-RTRPADHELEVGKEIECMVIECDPQ ARRIRLGVKQLSDNP--WQ-VF---ANAYGVGSTVEGEVSS-VTDFGIFVRV---P----GG--VEGLVRKQ HLVENRDGDP----GEALRKYAVGDRVKAVIVDMNVKDRKVAFSVRDYQR-K------VQR-DELSRYMSAP RG-------------EDEGSF---TLGDLMRQ-TSGK----------------------------------- ------------------------------------------------------------------------ ------------ >YP_143428/1-536 30S ribosomal protein S1 [Thermus thermophilus HB8]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------MEDKATQTPEQTF----------------- ------------------------------------------------------------------------ -------------------------------------------------SME-----AALQETEAR--LE-- ---------------------------K----R--------------------------------------- --------------------------------------------VR-P----------------G--QILTG KVVLV-G--SEG--VAV-DI--G-A----------------KTEGI-IPFNQLTTKPLSEEELRNLL-SPGD EVKVQVL-RVD--------PET----GQIL----LSRKKI-------EAQEKWDRIQELYEKGE---PVTVT IKE--RVKG-GVV-AELD-GVQGFMPASQLDLRRV---PNLDEFVGQQVLAKIIEFH-----RRKG-RVILS RRAVLEEEQKKAREAFLKSLEPGQVVE----GTVVE-VTDFGVFVNL------GPVDGLVHRSEITWGRFNH PREVIQKGQKV-KAQVLSVDPEKERVNLSIKALIPD--PWTTV-AEKYPVGTRVRGKVVGLTQFGAFVE-VE PGLEGLIHISEL--SWTKRPKHPSEVVKEGDEVEAVVLRLDPEERRL-SLGLKQT-------QPDPWQQLTE KYPPGTVLKGKVTGVTDFGVFVE-----IEPGIEGLVHVSELDHK--RVENPAALFKKGDEMEVVVLNIDPV EQRVSLSRKRLLPPP--LP------QEEERPRRARSGKERA--RRKGAPRRE---D----RR--EYEYGAVA EYNLYDASSV----PTTTATVKLGDLYGDLLASLGLEEE------------A------EEK----------- ------------------------SRG--------------------------------------------- ------------------------------------------------------------------------ ------------ >AAL55473/1-591 hemin-binding protein [Prevotella intermedia]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------MANFENVNPLSDFNWDDFENGVTVGGDKE-EL----------------- ------------------------------------------------------------------------ -------------------------------------------------T-------KAY---DNT--LN-- ---------------------------K-------------------------------------------- --------------------------------------------IQ-E----------------H--QVVEG EVISI-D--KKE--VVV-NI--G-Y----------------KSDGI-IPASEF----RYNPEL-----KVGD KVEVYVE-NQE--------DKS----GQLI----LSHKKA-------RLQKSWVNINEALEADA---VIQGY IKS--RTKG-GMI-VDVF-GIEAFLPGSQIDVHPI---RDYDVFVGKTMEFKVVKIN-----QEFR-NVVVS HKALIEAELEAQRKEIISHLEKGQILE----GVVKN-ITSYGVFVDL------GGVDGLIHITDLSWGRIND PHEVVELDQKI-NVVILDFDEEKKRIALGLKQLAPH--PWDAL-DPNLKVGDHVKGKVVVMADYGAFVE-IQ PGVEGLIHVSEM--SWSQHLRSAQEFMKAGDEVEAVVLTLDRDERKM-SLGIKQL-------KEDPWEAIEA KYPVGSKHVAKVRNFTNFGIFVE-----LEEGVDGLIHISDLSWTK-KVKHPSEFTQVGADMDVIVLEIDKE NRRLSLGHKQLETNP--WD-TY---ESIYTPGSTHVGKITE-SMDKGAVITL---N----EG--GEGFATPK HL-------V----KEDGSQAQLGEELPFVVIEFVKDTKRIILSHSRTFE-E---VKEEQA-RRQRTASKK- ------HSEPASQINNVAAGT---SLGDLDV--LADLKKKM-------EEGK-------------------- ------------------------------------------------------------------------ ------------ >NP_905473/1-599 ribosomal protein S1 [Porphyromonas gingivalis W83]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MENLKNIQPRE-DF----------------- ------------------------------------------------------------------------ -------------------------------------NWEEFEAGGVHAAVSRQEQEAAY---DKT--LN-- ---------------------------T-------------------------------------------- --------------------------------------------IK-E----------------K--EVVMG RVTAI-N--KRE--VVI-NV--G-Y----------------KSEGV-VPATEF--RYNPE------L-KVGD EVEVYIE-NQE--------DKK----GQLV----LSHRKA-------RAARSWERVNEALEKDE---IVKGY VKC--RTKG-GMI-VDVF-GIEAFLPGSQIDVRPI---RDYDAFVEKTMEFKIVKIN-----QEYK-NVVVS HKVLIEAELEQQKKEIIGKLEKGQVLE----GIVKN-ITSYGVFIDL------GGVDGLIHITDLSWGRVAH PEEIVQLDQKI-NVVILDFDEDRKRIALGLKQLMPH--PWDAL-DSELKVGDKVKGKVVVMADYGAFVE-IA QGVEGLIHVSEM--SWTQHLRSAQDFLHVGDEVEAVILTLDREERKM-SLGLKQL-------KPDPWADIET RFPVGSRHHARVRNFTNFGVFVE-----IEEGVDGLIHISDLSWTK-KIKHPSEFTEVGADIEVQVIEIDKE NRRLSLGHKQLEENP--WD-VF---ETVFTVGSIHEGTVIE-VMDKGAVVSL---P----YG--VEGFATPK HM-------V----KEDGSQAVLEEKLPFKVIEFNKDAKRIIVSHSRVFE-DEQKMAQREA-NAERKAEAKA AQKEAAAEAANPA--QAVEKA---TLGDLGE--LAALKEKL-------SEN--------------------- ------------------------------------------------------------------------ ------------ >YP_098327/1-597 30S ribosomal protein S1 [Bacteroides fragilis YCH46]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MENLKNVAPIE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------NWDAYENGESFAGASHEELEK-- -------------------------AYDGTLNK--------------------------------------- --------------------------------------------VN-D----------------R--EVVDG TVIAM-N--KRE--VVV-NI--G-Y----------------KSDGI-IPLNEF--RYNPD------L-KVGD TVEVYIE-NQE--------DKK----GQLV----LSHRKA-------RATRSWDRVNAALENEE---IIKGY IKC--RTKG-GMI-VDVF-GIEAFLPGSQIDVKPI---RDYDVFVGKTMEFKVVKIN-----QEFK-NVVVS HKALIEAELEQQKKEIIGKLEKGQVLE----GTVKN-ITSYGVFIDL------GGVDGLIHITDLSWGRVSD PKEVVELDQKL-NVVILDFDDEKKRIALGLKQLTPH--PWDAL-DPNLQVGDKVKGKVVVMADYGAFIE-IA PGVEGLIHVSEM--SWSQHLRSAQDFMKVGDEVEAVVLTLDREERKM-SLGIKQL-------KQDPWETIEE KYPVGSKHTAKVRNFTNFGVFVE-----IEEGVDGLIHISDLSWTK-KVKHPSEFTQIGADIEVQVLEIDKE NRRLSLGHKQLEENP--WD-VF---ETVFTVGSVHEGTIIE-MLDKGAVVAL---P----YG--VEGFATPK HL-------V----KEDGSQAQMDEKLEFKVIEFNKDAKRIILSHSRIFE-D---VAKAEE-RAEKKAASNA KKSS--KREETPAIQNQAAST---TLGDIDA--LAALKEQL-------EGKK-------------------- ------------------------------------------------------------------------ ------------ >NP_813256/1-599 30S ribosomal protein S1 [Bacteroides thetaiotaomicron VPI-5482]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------MENLKNVAPIEDFNWDAYENGEAVTSASHEDLE------------------ ------------------------------------------------------------------------ ---------------------------------------------------------KAY---DGT--LN-- ---------------------------K-------------------------------------------- --------------------------------------------VN-D----------------R--EVVDG TVIAM-N--KRE--VVV-NI--G-Y----------------KSDGI-IPLNEF--RYNPD------L-KVGD TVEVYIE-NQE--------DKK----GQLV----LSHRKA-------RATRSWDRVNAALENEE---IIKGF IKC--RTKG-GMI-VDVF-GIEAFLPGSQIDVKPI---RDYDVFVGKTMEFKVVKIN-----QEFK-NVVVS HKALIEAELEQQKKEIIGKLEKGQVLE----GTVKN-ITSYGVFIDL------GGVDGLIHITDLSWGRVSD PKEVVELDQKL-NVVILDFDDEKKRIALGLKQLTPH--PWDAL-DTDLKVGDKVKGKVVVMADYGAFIE-IA TGVEGLIHVSEM--SWSQHLRSAQDFMKVGDEVEAVVLTLDREERKM-SLGIKQL-------KQDPWETIEE KYPVGSKHTAKVRNFTNFGVFVE-----IEEGVDGLIHISDLSWTK-KVKHPSEFTQIGADIEVQVLEIDKE NRRLSLGHKQLEENP--WD-VF---ETVFTVGSVHEGTIIE-MLDKGAVVAL---P----YG--VEGFATPK HL-------V----KEDGSQAQLDEKLEFKVIEFNKDAKRIILSHSRIFE-D---VAKAEE-RAEKKAASGA KKSSNNKREDAPMIQNQAAST---TLGDIDA--LAALKEQL-------EGKK-------------------- ------------------------------------------------------------------------ ------------ >ZP_01119004/1-607 30S ribosomal protein S1 [Polaribacter irgensii 23-P]. ---------------------------------------------------------------------MSE ETKNTEEQVVAT------EVQETAIPA--------------------------------------------- -----------V----D---------PKQFLADFNWHKYEQGIEAVDEEKLQ-HF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------KAL---EGT--VG-- ---------------------------F-------------------------------------------- --------------------------------------------VN-E----------------R--DVIEG TVIRI-T--DRD--AII-DI--N-S----------------KSEGV-ISLNEF----RYNQ--G--L-KEGD TVEVLVD-KRE--------DSS----GQLV----LSHKKA-------RVIKAWERVNNAHETGE---VVNGF VKC--RTRG-GMI-VDV-FGIEAFLPGSQIDVKPI---RDYDQYVEKTMEFKVVKIN-----HEFK-NVVVS HKALIEADIELQKKEIIGQLEKGQVLE----GIVKN-ITSYGVFVDL------GGVDGLVHITDLSWSRINH PNEVVELDQKL-NVVILDFDDNKSRIQLGLKQLSAH--PWEAL-NDTLKVGDKVTGEVVVIADYGAFVE-VE QGVEGLIHVSEM--SWSTHLRSAQDFVKVGDKVEAQVLTLDRDDRKM-SLGIKQL-------HPDPWTDITT KYPVGSTHTGTVRNYTNFGVFVE-----LEEGIDGLVYISDLSWTK-KIKHPSDFVTVGDKLEVQVLELDVE NRKLNLGHKQTQDNP--WD-AH---EATYAIGSTHEGTIKE-KNDKGAVVSF---A----DG--VEGFAPTR FL-------E----KEDGSKLEKGNTIAFIVLEFSKEYRRVVVSHTSIFR-E------EEK-RNIKTAVKKS VDAE---------------KT---TLGDIGG--LAALKEKM-------EAGTKKKK---------------- ------------------------------------------------------------------------ ------------ >ZP_01051625/1-609 30S ribosomal protein S1 [Tenacibaculum sp. MED152]. ------------------------------------------------------------------------ ---------------------------------------------------------------------MSE ETKNTEEQVASDVQNAATPAVEEKQDPKQFLADFNWHKYEQGIEAVDEEKLK-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------EAL---KGT--IG-- ------------------------------------------------------------------------ --------------------------------------------FVNE----------------S--DVIEG TVVRITD--RD---AII-DI--N-S----------------KSEGV-ISLNEF----RYNQNL-----AEGD TVEVLVD-KRE--------DSS----GQLV----LSHKKA-------RVIKAWERVNNAHETGE---VVNGF VKC--RTRG-GMI-VDVF-GIEAFLPGSQIDVKPI---RDYDQYVEKTMEFKVVKIN-----HEFK-NVVVS HKALIEADIELQKKEIIGQLEKGQVLE----GVVKN-ITSYGVFVDL------GGVDGLVHITDLSWSRINH PNEVVELDQKL-NVVILDFDDNKSRIQLGLKQLTAH--PWEAL-DDSLKVGDKVTGEVVVLADYGAFVE-VE QGVEGLIHVSEM--SWSTHLRSAQDFVKVGDKVEAQVLTLDREDRKM-SLGIKQL-------HPDPWTDITT KYPVGSTHTGTVRNYTNFGVFVE-----LEEGIDGLVYISDLSWTK-KIKHPSDFVTVGQKLDVQVLELDVE NRKLNLGHKQTQDNP--WD-AH---EATYAIGSTHEGTIKE-KNDKGATVSF---A----DG--VEGFAPTR FL-------E----KEDGSKLEKGDTVQFIVMEFSKEYRRVVVSHTSLFK-E------QER-KNIKAAAKKS ADAE---------------KT---TLGDIGG--LADLKAQM-------EAKAKKK----------------- ------------------------------------------------------------------------ ------------ >ZP_01106352/1-625 putative 30S ribosomal protein S1 [Flavobacteriales bacterium HTCC2170]. ---------------------------------------------------------------------MAE EKATKAVEETTEATQEVKTVEETTEAT--------------------------------------------- -----------QETKVE----TPVQDPKEFLENFDWEKYEQGIERVEDSKLQ-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------TLV---AEN--FV-- ---------------------------D-------------------------------------------- --------------------------------------------TA-D----------------E--EVVKG TVVYL-T--DRE--AII-DI--N-A----------------KSEGV-ISLNEF----RYNP--D--L-KVGD QVEVLID-IRE--------DKS----GQLV----LSHRKA-------RTIMAWDRVNAAHDKEE---IVSGF VKC--RTKG-GMI-VDV-FGIEAFLPGSQIDVKPI---RDYDQYVNKTMEFKVVKIN-----HEFK-NVVVS HKALIEADIEEQKKEIISQLEKGQVLE----GVVKN-ITSYGVFIDL------GGVDGLVHITDLSWSRINH PNEVVELDQKL-NVVILDFDENKSRIQLGLKQLEKH--PWDAL-SEDIKIGDKVKGKVVVIADYGAFIE-VV EGVEGLIHVSEM--SWSTHLRSAQDFVKVGDEVEAVVLTLDREDRKM-SLGIKQL-------TPDPWTDITT KYPVGSKHKGIVRNFTNFGVFLE-----LEEGIDGLIYISDLSWTK-KIKHPSEFVTVGDTLEVEVLELDVE GRKLSLGHKQTTENP--WD-KY---ESEFALDTVHKASITE-IVDKGATIDF---N----DD--ITAFVPQR HL-------E----KEDGKKLAKGEEAEFKIIEFNKDFKRVVASHTAIFR-E------EEK-RNVKAAVKRA KASA-----------DEA-KP---TLGDANDA-LQALKDKM-------EADSKKK----------------- ------------------------------------------------------------------------ ------------ >ZP_01247751/1-591 RNA binding S1 [Flavobacterium johnsoniae UW101]. ---------------------------------------------------------------------MSE QTKSQ------------------------------------------------------------------- ---------------------------EEFLANFNWHNFQEGIDAVDEKNLQ-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------ELV---SKT--FI-- ---------------------------A-------------------------------------------- --------------------------------------------TD-Q----------------E--EVVEG VVVRI-T--DRD--VIV-DI--N-A----------------KSEGV-ISLNEF----RYNP--N--L-KVGD KVEVLID-IRE--------DKT----GQLV----LSHRKA-------RTIKSWDRVIAANETGE---IVNGF VKC--RTKG-GMI-VDV-FGIEAFLPGSQIDVKPI---RDYDVYVNKMMEFKVVKIN-----HEFK-NVVVS HKALIEADIEVQKKEIIGQLQKGQVLE----GVVKN-ITSYGVFIDL------GGVDGLIHITDLSWSRINH PSEVLELDQKL-NVVILDFDDEKTRIQLGLKQLNAH--PWDAL-DANLTVGDKVKGKVVVIADYGAFIE-VA EGVEGLIHVSEM--SWSTHLRSAQDFVKVGDVVEAVILTLDREDRKM-SLGIKQL-------TQDPWTDITS KYPVGSKHTGIVRNFTNFGIFVE-----LEEGIDGLIYISDLSWTK-KIKHPSEFVNVGEKLDVVVLELDVE GRKLSLGHKQTTANP--WD-QY---EDSFAVGTIHNGEISE-IVDKGATVEF---G----DD--IVAFIPTR HL-------E----KEDGKKLKKGDTADFKVIEFNKEFKRVVASHTAIFR-E------EEE-KNVKAAAETT ASAS-----------TNAPAA---TLGDNNDV-LAALKAKM-------EKTEKK------------------ ------------------------------------------------------------------------ ------------ >ZP_01061143/1-627 30S ribosomal protein S1 [Flavobacterium sp. MED217]. ---------------------------------------------------------------------MAE ENKKPEAQEEVELKTNVAAAEELATPD--------------------------------------------- -----------AIKEPKGYESAAQANPEKFLEEFNWHNYEEGIDPIDDDKLD-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------KLV---AEN--FV-- ---------------------------D-------------------------------------------- --------------------------------------------TL-D----------------D--EVVEG KVINI-T--DRD--AII-DI--N-A----------------KSEGV-ISLNEF----RYNP--D--L-KVGD TVEVLID-VRE--------DAT----GQLV----LSHRKA-------RVIKAWERVNKAHEDGT---IVTGF VKA--RTKG-GMI-VDV-FGIEAFLPGSQIDVKPI---RDYDAYVNKTMEFKVVKIN-----QEFK-NVVVS HKALIEADIEEQKKEIIGQLEKGQVLE----GTVKN-ITSYGVFVDL------GGVDGLVHITDLSWSRINH PNEIVDLDQKL-NVVILDFDEDKTRIQLGLKQLKKH--PWDAL-SETLSVGDKVKGKVVVIADYGAFVE-VE EGVEGLIHVSEM--SWSTHLRSAQDFVNVGDEVEAQILTMDREDRKM-SLGIKQL-------TQDPWTDITS KYPVGSRHTGIVRNFTNFGVFVE-----LEEGIDGLIYISDLSWTK-KIKHPSEFTNIGDKLEVVVLELDVE GRKLSLGHKQIEDNP--WD-KY---EAEFAVGTKHTGTIGE-IVDKGATVEF---N----ED--IVAFIPGR HL-------E----KEDGSKLGKGDEADFQIIEFNKDFKRVVASHTALFK-E------EEA-KIVKQAAKKA ADSA-----------AAS-AP---TLGDANDA-LAALKKQM-------EKGGN------------------- ------------------------------------------------------------------------ ------------ >YP_861886/1-620 30S ribosomal protein S1 [Gramella forsetii KT0803]. ---------------------------------------------------------------------MAE ETKNKEVQDNTE----NVEVQDVAGMD--------------------------------------------- -----------SQSQPE--QEKQQENPEKFLKEFNWHNYEEGIDPIDDKKLE-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------KLV---AAN--FV-- ---------------------------D-------------------------------------------- --------------------------------------------TL-D----------------D--EVVTG KVINI-T--DRD--AII-DI--N-A----------------KSEGV-ISLNEF----RYNP--D--L-KEGD DVEVLID-VRE--------DST----GQLI----LSHRKA-------RVIKAWERVNTAHDESL---VVNGF IKC--RTKG-GMI-VDV-FGIEAFLPGSQIDVKPI---RDYDAYVGKNMEFKVVKIN-----HEFK-NVVVS HKALIEADIEEQKKEIIGQLEKGQVLE----GTVKN-ITSYGVFVDL------GGVDGLVHITDLSWSRINH PNEIVELDQKL-NVVILDFDESKSRIQLGLKQLSQH--PWDAL-NEQLKVGDNVKGKVVVIADYGAFIE-VA EGVEGLIHVSEM--SWSTHLRSAQDFVNVGDEVEAQILTLDREDRKM-SLGIKQL-------SQDPWTDITS KYPVGSKHEGIVRNFTNFGVFVE-----LEEGIDGLIYISDLSWTK-KIKHPSEFTNVGDKLEVVVLELDVE GRKLSLGHKQIEDNP--WD-KY---EKDFGVGSKHTAAITE-IVDKGATIDF---N----ED--ITAFIPQR HL-------E----KEDGSKLKQGEGAEFQIIEFNKEFKRVVASHMVIHK-E------EEQ-KIVKQAAKKS ASQG-----------KDS-AT---TIGDVNAD-LQALKDKM-------E-GKK------------------- ------------------------------------------------------------------------ ------------ >YP_445904/1-871 ribosomal protein S1, putative [Salinibacter ruber DSM 13855]. ------------------------------------------------------------------------ ---------------------------MAEQEQVASKDDTQDTADAQPAPAEAEEAAEAEAPPADAADSGDD VEAADPEAPSTPDAGGEDVDEPAAEEPAPAEDAPADAADESGDGAPADPPPEPGF----------------- ------------------------------------------------------------------------ -----------------VSRILEEAVEEASQDLPMPSGDEASVDVSEFDEPTETVSPDELERTEEAQGFTGE TYGETVSLDELETEEQAPADTSVYDQFRDVVDETSID----------------------------------- --------------------------------------------VR-E----------------Q--DIVEG RVLRV-N--EDY--VVI-DI--G-Y----------------KSDGI-VSRDEF-------GEEE--I-HPGD TVEVYLE-RKE--------DRD----GQLV----LSKEQA-------DKVRRWQRVEEIYENEE---VIEGT IIR--RIKG-GMI-VELFDGMEAFLPGSQIDVRPV---RDFESYLETRMEFKIVKLN-----PENE-NIVVS HRELIEHELEEQRQEILEQLEVGQVLE----GTVKN-IVDFGVFIDL------GGVDGLLHITDLSWGRVSH PSEVVELDQEL-EVVVLDYEEERQRISLGLKQLRDH--PWDQI-GNKYDEGDVVEGKVVSITNYGAFVE-IE KGIEGLVHISEM--SWTRHIEHPSQMVSLGQVVDVKILNIDQEERKI-SLGMKQL-------EPDPWEGISD RYPAGTVLTGTVRNITNFGVFVE-----IEPGIDGLVHVSDLSWTK-KIRHPGDMVDEEQELDVVILNIDEE RRRISLGHKQVKTNP--WD-QF---ADAYEEGNDTTGEVVR-VEDKGLVVQL---------PLDVEAFVPGS EL----KNGP----KAFKNHYHEGDELELQVIRFDKDQKDIVLSETAKEEAERQEEQDEQERESRREER--E REEAVRDFKDEPEPEPDEPTTGPTTLGELSGLADLRREMEEEEAEEETAAEDDDAEADDAQAETPDEEEAAS EGEAGDEPDAEAPSEDDDASTFDETAGFPENFPRVSRLENAGVTSLADAREVDDLTDLDGIGSAYAEEISDA LDEFDETGSVSS >YP_378886/1-592 RNA binding S1 [Chlorobium chlorochromatii CaD3]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MTTTVTPAAEKKVIAKPGRK-KF----------------- ------------------------------------------------------------------------ ---------------------------------------------------------KFFANYEPAELAR-- ----------------------MEQLYTSTLNE--------------------------------------- --------------------------------------------IT-E----------------E--EIVRG RVVSI-S--NKD--VTI-DV--G-F----------------KSEGI-VSLLEF----RDDDEV-----QVGD DVEVYLE-SIE--------DKM----GQLI----LSKKKA-------DVLRIWDKIYDSIENDT---IINGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGQTMEFRVVKIN-----PVTQ-NIVVS HKVILEEAYAARREEMLANIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVELDQPI-KVVVVGFDENSKRVSLGMKQLESH--PWENI-EIKYPVGSKAQGRVVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPGQFVTLGQEVECVILNIDKEHTKL-SLSMKRV-------SEDPWIALSE KYIENSIHKGTISNITDFGVFVE-----LESGVDGLVHISDLSWTK-KIRHPSELVKKNQELEVKVLKFDVH ARRIALGHKQINPDP--WG-EF---EQKYAVGAETPGQISQ-IIEKGVIVIL---P----GD--VDGFVPVS HL---LQGGV----KDIHSSFKIGDELPLRVIEFDKENKRIILSALEYFK--------DKSKEEIEAYLAAH PNE------------KQEIEAATAELEPPVKSHDKKGGDK-------------------------------- ------------------------------------------------------------------------ ------------ >YP_375629/1-589 RNA binding S1 [Pelodictyon luteolum DSM 273]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MLETVAVEKTVKEKPARKKIKYFAHYEPAELSQME-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------QLY---TST--LN-- ---------------------------E-------------------------------------------- --------------------------------------------IT-E----------------D--EIVKG RIVSI-S--NKD--VTI-DV--G-F----------------KSEGI-VSLLEF----RDDDEI-----KVGD DVEVYLE-NIE--------DKM----GQLI----LSKKKA-------DVLRIWDKIYDSIENDT---IINGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGQTMDFRVVKIN-----PVTQ-NIVVS HKVILEEEYAARREEMLANIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVELDQPI-KVVVVGFDENTKRVSLGMKQLEAH--PWENI-ELKYPVGSKAQGRVVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPGQFVTLGQEVECVILNIDKDHTKL-SLSMKRV-------NEDPWIALSE KYTEGSLHNGTVSNITDFGVFVE-----LEAGVDGLVHISDLSWTK-KIRHPSELVKKNQELNVKVLKFDVH ARRIALGHKQINPDP--WG-GF---EQQYAVGAETPGQVSQ-IIEKGVIVIL---P----GD--VDGFVPVT HL---LQGGV----KDIHTSFKAGDELPLRVIEFDKENKRIILSALEYFK--------DKSKEEIESYLQAH PNE------------KKEIEDATAELEPQPKA----------------DRKGDRQ----------------- ------------------------------------------------------------------------ ------------ >ZP_00662093/1-602 RNA binding S1 [Prosthecochloris vibrioformis DSM 265]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------MAETEIAAVAASAETAPATEKAVDQKPARKKIKFFAHYEPAELSQM----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------QLY---TST--LN-- ---------------------------Q-------------------------------------------- --------------------------------------------IN-Q----------------D--EIVKG RIVSI-S--NKD--VTI-DV--G-Y----------------KSEGI-VSLLEF----RDEDEI-----QVGD DVEVYLE-NIE--------DKM----GQLI----LSKKKA-------DVLRIWDKIYDSIENDT---IISGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGQTMDFRVVKIN-----PVTQ-NIVVS HKVILEEEYAARREEMLDSIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVDLDQPI-KVVVVGFDENTKRVSLGMKQLEAH--PWENI-ELKYPVGSKAQGRVVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPGQFVTLGQEVECVILNIDKDHTKL-SLSMKRV-------NEDPWIALSE KYVENTRHKGTVSNITDFGVFVE-----LEPGVDGLVHISDLSWTK-KIRHPSELVKKNQELEVKVLKFDVH ARRIALGHKQMNPDP--WG-GF---EQQYAVGAESSAEISQ-IIEKGVIVIL---P----GD--VDGFVPAT HL---LQGGV----KDIHSSFKIGDALPLRVIEFDKENKRIILSALEYFK--------DKSKEEIESYLQAH PNE------------KKEIEDATAELEPQPKSSEKKG-----------DKE--------------------- ------------------------------------------------------------------------ ------------ >NP_661192/1-550 ribosomal protein S1 [Chlorobium tepidum TLS]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------SLY---TST--LS-- ---------------------------E-------------------------------------------- --------------------------------------------IS-E----------------E--EIVKG RIVSI-S--NKD--VTI-DV--G-F----------------KSEGI-VSLLEF----RDDDEI-----KVGD DVEVYLE-NIE--------DKM----GQLI----LSKRKA-------DVLRIWDKIYDSIENDT---IINGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGKTMDFRVVKIN-----PVTQ-NIVVS HKVILEEEYAAKREEMLANIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVELDQPI-KVVVVGFDENTKRVSLGMKQLEAH--PWENI-EIKYPVGIKATGRVVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPSQFVSLNQEVEVVILNIDKEHTKL-SLSMKRV-------SEDPWIALSE KYVEGSLHKGTVSNITDFGVFVE-----LEPGVDGLVHISDLSWTK-KIRHPSELVKKGQELEVKVLKFDVN ARRIALGHKQINNDP--WG-EF---EQKYAVGAECTGAISQ-IIEKGVIVIL---P----GE--VDGFVPVS HL---LQGGV----KDIHSSFKIGDELPLRVIEFDKENKRIILSALEYFK--------DKSKEEIEAYL--- ----------------QAHPNEKKEIEAASAELEPQP-----------KGR--------------------- ------------------------------------------------------------------------ ------------ >YP_910900/1-591 RNA binding S1 domain protein [Chlorobium phaeobacteroides DSM 266]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------MAETLTLEKKVQERLARKKVKYFAHYEPAELE-QM----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EML---YTSTLCE-- ------------------------------------------------------------------------ --------------------------------------------IT-E----------------D--EIVKG RIVSI-S--NKD--VTI-DV--G-F----------------KSEGI-VSLLEF----RDDDDV-----AVGD EVEVYLE-NIE--------DKM----GQLI----LSKKKA-------DVLRIWDKIYDSIENDT---IINGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGQTMDFRVVKIN-----PVTQ-NIVVS HKVILEEAYAARREEMLANIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVDLDQPI-KVVVVGFDENTKRVSLGMKQLEAH--PWENI-EIKYPVGSKARGRIVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPSQFVSLNQEVECVILNIDKDHTKL-SLSMKRV-------NEDPWIALSE KYIEASLHKGTVSNITDFGVFVE-----LEPGVDGLVHISDLSWTK-KIRHPSELVKKNQELDVKVLKFDVN ARRIALGHKQINPDP--WD-DF---EQKYAVGAETPARISQ-IIEKGVIVIL---P----GD--VDGFVPVS HL---LQGGV----KDIHSSFALGDELPLRVIEFDKENKRIILSALEYFK--------DKSKEEIEAYLQAH PNE------------KKEIEDATAELEPQVKSAEKKSGEAK------------------------------- ------------------------------------------------------------------------ ------------ >ZP_00512438/1-586 RNA binding S1 [Chlorobium limicola DSM 245]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MPETLSLEKKVQERPARKKVKVFAHYDSAALAEME-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------KLY---TST--LS-- ---------------------------E-------------------------------------------- --------------------------------------------IR-E----------------D--EIVKG RIVSI-S--NKD--VTI-DV--G-Y----------------KSEGI-VSLLEF--RDEEEGEV-----KVGD EVEVYLE-NIE--------DKM----GQLI----LSKKKA-------DVLRIWDKIYDSIENDT---IINGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGQTMDFRVVKIN-----PVTQ-NIVVS HKVILEEEYAARREEMLANIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVELDQPI-KVVVVGFDENTKRVSLGMKQLESH--PWENI-ELKYPVGSKANGRVVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPGQFVTLGQEVECVILNIDKEHTKL-SLSMKRV-------NEDPWIALSE KYIENSLHKGTVSNITDFGVFVE-----LEAGVDGLVHISDLSWTK-KIRHPSELVKKNQELEVKVLKFDVN ARRIALGHKQINPDP--WD-EF---EQKYAVGAETPGNISQ-IIEKGVIVIL---P----GD--VDGFVPVS HL---LQGGV----KDIHSSFAVDNELPLRVIEFDKENKRIILSALEYFK--------DKSKEEIEAYL--- ----------------QAHPNEKKEIEDATAELEPQPKGSK------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01386087/1-596 RNA binding S1 [Chlorobium ferrooxidans DSM 13031]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------MAEAFTSQDKKVKERPARKKIKVFAHYEAAELAQME-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------QLY---SST--LN-- ---------------------------E-------------------------------------------- --------------------------------------------IT-E----------------D--EIVKG RIVSI-S--NKD--VTI-DV--G-F----------------KSEGI-VSLLEF----RDDDEV-----KVGD DVEVYLE-NIE--------DKM----GQLI----LSKKKA-------DVLRIWDKIYDSIENDT---IINGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGQTMDFRVVKIN-----PVTQ-NIVVS HKVILEEEYAARREEMLANIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVDLDQPI-KVVVVGFDENTKRVSLGMKQLESH--PWENI-ELKYPVGSKAQGRVVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPGQFVTLGQEVECVILNIDKDHTKL-SLSMKRV-------NEDPWIALSE KYIENSLHKGTVSNITDFGVFVE-----LEPGVDGLVHISDLSWTK-KIRHPSELVKKNQELEVKVLKFDVH ARRIALGHKQINQDP--WD-EF---EQKYAVGAETPGEISQ-IIEKGVIVIL---P----GD--VDGFVPVS HL---LQGGV----KDIHSSFKIGDGLPLRVIEFDKENKRIILSALEYFK--------DKSKEEIEAYLLAH PNE------------KKEIEAATAELEPPIKSADKKAAEPKPAEN--------------------------- ------------------------------------------------------------------------ ------------ >ZP_00588340/1-592 RNA binding S1 [Pelodictyon phaeoclathratiforme BU-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MAEAFTQEKKVKERPARKKLKFFAHYEPAELALME-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------QLY---SST--LN-- ---------------------------E-------------------------------------------- --------------------------------------------IT-E----------------D--EIIKG RIVSI-S--NKD--VTI-DV--G-F----------------KSEGI-VSLLEF----RAEDEV-----QVGD DVEVYLE-NIE--------DKM----GQLI----LSKKKA-------DVLRIWDKIYDSIENDT---IINGK IIN--RVKG-GMT-VSLS-GVEAFLPGSQIDVKPV---RDFDALVGQTMDFRVVKIN-----PVTQ-NIVVS HKVILEEAYAARREEMLANIKVGMVLE----GTVKN-ITDFGIFVDL------GGLDGLVHITDITWGRINH PSEVVDLDQPI-KVVVVGFDENTKRVSLGMKQLESH--PWENI-EVKYPVTSKAQGRVVSITDYGAFVE-IE KGIEGLVHISEM--SWTQHIKHPGQFVTLGQEVECVILNIDKDHTKL-SLSMKRV-------NEDPWIALSE KYIEGSLHKGTVSNITDFGVFVE-----LEPGVDGLVHISDLSWTK-KIRHPSELVKKNQDLEVKVLKFDVH ARRIALGHKQINQDP--WD-EF---EQKYAVGAETPGEISQ-IIEKGVIVIL---P----GD--VDGFVPVS HL---LQGGV----KDIHSSFKIGDALPLRVIEFDKENKRIILSALEYFK--------DKNKEEIEAYLAAH PNE------------KKEIEAATAELEPPVKS-SEKKVSESVK----------------------------- ------------------------------------------------------------------------ ------------ >YP_197893/1-550 Ribosomal protein S1 [Wolbachia endosymbiont strain TRS of Brugia malayi]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------MNNNDPTVNLPISIRKLSSNKFIEEICQDQFEDQDN----------------- ------------------------------------------------------------------------ ---------------------------------------------------------ALF---EDSFINK-- ------------------------------------------------------------------------ --------------------------------------------IK-E----------------G--DVVEG IITRV-N--PND--IVV-HI--G-L----------------KSDGR-IPIKEL----GCNDKI-----VVGS KIRVYVE-RIE--------DYH----GNVV----LSREKA-------IRDEKWNKLEEDAVTKA---EVSGV IKR--SIKC-GFI-VDLGDGISAFLPLSHVDLKQV---KDARHLIETEQKFIVLKMD-----KKQG-NIVVS RKLVLEKLHAGEKTKFLEFLNEGDIIE----GKIKS-ITHYGVFVGIHESDAVGVIDGLLHITDISWSRVSH PSAAFACGQII-KVKIIKIDKENAKVSLGIKQLEDN--PWQDV-ESKYQVDSIHKGHITSIEDYGLFVE-LK PGIEGLVHSSEI--TWVKSNLPVNSLVTRGQEVSVKILNVDITKNRM-SLSMKRC-------VDNPWQVFVN KYPPGSIVSGKVKNNTISYMSITFNDDEIDENVEGTIYAQDLSWSK-NGSDEIKKYNVGDTIEAKVIRANVN RTRIYLGIKQIEYDP--LI-EL---IKKVKVGDKMQVTVGK-REDSGLVVEV---E----ND--VALLIDQE HL---PESKK----------FSISDKIEVEVLGVEEYNVILSAK---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_966811/1-550 ribosomal protein S1, putative [Wolbachia endosymbiont of Drosophila melanogaster]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------MNNNNPVVNLPVTIRKLSSNKFIEEICQGQFEDQDN----------------- ------------------------------------------------------------------------ ---------------------------------------------------------TLF---EDSFVNK-- ------------------------------------------------------------------------ --------------------------------------------IK-E----------------G--DVVEG VITRI-N--PND--VVV-DI--G-L----------------KSDGR-ILIKEL----GCNDEV-----IIGS KIRVYVE-RIE--------DYH----GNVV----LSREKA-------IRDEKWNKLEEDTVTRA---EVSGV IKR--SIKC-GFI-VDLGDGISAFLPLSHVDLKQV---KDAKHLIETEQKFIVLKMD-----KKQG-NIVVS RKLVLEKLHAGEKIKFLESLNEGDIIE----GKIKS-ITHYGVFVGIHESDVVGVIDGLLHITDISWSRVSH PSAVFTCGQTI-KVKIIKIDKENAKISLGVKQLEDS--PWQDA-ESKYPVDSVHKGYVTSIEDYGLFVE-LR PGIEGLVHSSEI--TWVKSNLPVSSLVTRGQEVYVKILSIDIAKSRM-SLSMKRC-------VDNPWQVFIN KYPPGSIVSGEVKNNTGSYVSVAFGDSEIDENVEGTIYVKDFSWSK-NGSDEIKKYNVGDKIEAKVIRANVN RARIYLGIKQIEYDP--LE-EL---IKKVKVGDKIQVIVDK-RENNGLVVEV---E----ND--VTLLIDQE HL---PENKK----------FSISEKIEVEVLGVEEYNIALSAK---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00373357/1-485 30S ribosomal protein S1 [Wolbachia endosymbiont of Drosophila ananassae]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MV-DI--G-L----------------KSDGR-ILIKEL----GCNDEV-----IIGS KIRVYVE-RIE--------DYH----GNVV----LSREKA-------IRDEKWNKLEEDTVTRA---EVSGV IKR--SIKC-GFI-VDLGDGISAFLPLSHVDLKQV---KDAKHLIETEQKFIVLKMD-----KKQG-NIVVS RKLVLEKLHAGEKIKFLESLNEGDIIE----GKIKS-ITHYGVFVGIHESDVVGVIDGLLHITDISWSRVSH PSAVFTCGQTI-KVKIIKIDKENAKISLGVKQLEDS--PWQDA-ESKYPVDSVHKGYVTSIEDYGLFVE-LR PGIEGLVHSSEI--TWVKSNLPVSSLVTRGQEVYVKILSIDIAKSRM-SLSMKRC-------VDNPWQVFIN KYPPGSIVSGEVKNNTGSYVSVAFGDSEIDENVEGTIYVKDFSWSK-NGSDEIKKYNVGDKIEAKVIRANVN RARIYLGIKQIEYDP--LE-EL---IKKVKVGDKIQVIVGK-REDNGLVVEV---E----ND--VTLLIDQE HL---PENKK----------FSISEKIEVEVLGVEEYNIALSAK---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_197519/1-567 30S ribosomal protein S1 [Ehrlichia ruminantium str. Welgevonden]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------MFMENLQ--TSLESENYLQNIKKIKSNKFISHTLETEGYDNNNEDTEF----------------- ------------------------------------------------------------------------ -------------------------------------------------Q-------HAL---KEF--MD-- ---------------------------S----S--------------------------------------- --------------------------------------------VK-E----------------G--QIIEG TIICI-D--KGY--VTI-DS--G-L----------------KSESI-ISLKEF--E-LGDDYQN--I-GVGS KVKLYLE-KME--------GRN----GSVV----LSREKA-------IRSELWQKLEEAAENKE---DVEGV IFS--SIKC-GYT-VDIK-GVVAFLPASHVALRQV---KDITPLLGKKQKFRILKMD-----KKQG-NIVVS RKAILEESLADAKSLYLSQLNEGDIIE----GKVKS-ITKYGVFIEIHESPSVGVVDGLLHITDISWSRVNH PSAVFSCGQTV-RTKIIKIDRENKKISLGVKQLEES--PWSNI-EKKYPVDSVHKGIVTSIEEYGIFVE-LE VGIEGLVHVSEV--SWTKSSLPINQLFMRGEEIQVKVLSIDTAKSRM-SLSMKRC-------QDNPWEAFTL KYPLGSIVLTKVKNITNLGIFVSFQDETLNSGIEGLIRITELSWSL-PPEAAVKKYSIGDSIEAKILMINTN KSKIDLGIKQLEYDP--FL-DL---LKRTNLGDKIPVTVTKVVEDTGILVDV------------FNGSNSFN LL---IEQEY----LPDNKKFFPGDKLEAEVLLIETYNMILSLK---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_180477/1-565 30S ribosomal protein S1 [Ehrlichia ruminantium str. Welgevonden]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------MENLQ--TSLESENYLQNIKKIKSNKFISHTLETEGYDNNNEDTEF----------------- ------------------------------------------------------------------------ -------------------------------------------------Q-------HAL---KEF--MD-- ---------------------------S----S--------------------------------------- --------------------------------------------VK-E----------------G--QIIEG TIICI-D--KGY--VTI-DS--G-L----------------KSESI-ISLKEF--E-LGDDYQN--I-GVGS KVKLYLE-KME--------GRN----GSVV----LSREKA-------IRSELWQKLEEAAENKE---DVEGV IFS--SIKC-GYT-VDIK-GVVAFLPASHVALRQV---KDITPLLGKKQKFRILKMD-----KKQG-NIVVS RKAILEESLADAKSLYLSQLNEGDIIE----GKVKS-ITKYGVFIEIHESPSVGVVDGLLHITDISWSRVNH PSAVFSCGQTV-RTKIIKIDRENKKISLGVKQLEES--PWSNI-EKKYPVDSVHKGIVTSIEEYGIFVE-LE VGIEGLVHVSEV--SWTKSSLPINQLFMRGEEIQVKVLSIDTAKSRM-SLSMKRC-------QDNPWEAFTL KYPLGSIVLTKVKNITNLGIFVSFQDETLNSGIEGLIRITELSWSL-PPEAAVKKYSIGDSIEAKILMINTN KSKIDLGIKQLEYDP--FL-DL---LKRTNLGDKIPVTVTKVVEDTGILVDV------------FNGSNSFN LL---IEQEY----LPDNKKFFPGDKLEAEVLLIETYNMILSLK---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_303249/1-567 RNA binding S1 [Ehrlichia canis str. Jake]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------MENFQIKTNLGSEDYLQNIKKIKSNKFISHNLEAEDSEDDNSS-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------Q-------NAL---KEFIDDS-- ------------------------------------------------------------------------ --------------------------------------------VK-E----------------G--QIIEG TIVCI-D--KGY--VTI-DS--G-L----------------KSESI-VSLKEF-----ELGDDYQNI-GIGS KVKLYLE-KIE--------GRN----GSVV----LSREKA-------IRDELWQKLEEAAERKE---DVEGV IFS--SIKC-GYT-VDIK-GVVAFLPASHVALRQV---KDITPLLGKKQKFRILKMD-----NKQG-NIVVS RKAILEESLADAKSLYLSQLNEGDIIE----GKVKS-ITKYGVFIEIHESPSVGVVDGLLHITDISWSRVSH PSAVFSCGQTV-KTKIIKIDRENKKISLGVKQLEES--PWSNI-EKKYPVDSIHKGIVTSIEDYGVFVE-LE TGIEGLVHVSEV--SWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRM-SLSMKRC-------QENPWQAFTL KYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSL-SPEAAVKKYSIGDSVEAKILMINPN KSKIDLGVKQLEYDP--FL-DL---LKKTNLGDKIPVTVTKVVEDTGILVDV------------FNGSNSFN LL---IEQEY----LPDNKKFFPGDKLEAEVLLIETYNMVLSLK-------H-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_507222/1-567 putative ribosomal protein S1 [Ehrlichia chaffeensis str. Arkansas]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------MEDLQTKTNLGSENYLHNIKKIKSNKFISHNLEVEDSDNDSSS-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------Q-------HAL---KEFIDDS-- ------------------------------------------------------------------------ --------------------------------------------VK-E----------------G--QIIEG TIICI-D--KGY--VTI-DS--G-L----------------KSESI-VSLKEF-----ELGDDYQNI-SIGS KVKLYLE-KIE--------GRN----GSVV----LSREKA-------IRDELWQKLEEAAEKKE---DVEGV IFS--SIKC-GYT-VDIK-GVVAFLPASHVALRQV---KDITPLLGKKQKFRILKMD-----KKQG-NIVVS RKAILEESLADAKSLYLSQLNEGDIIE----GKVKS-ITKYGVFIEIHESPSVGVVDGLLHITDISWSRVSH PSAVFSCGQTV-KTKIIKIDRENKKISLGVKQLEES--PWSNI-EKKYPVDSIHKGIVTSIEEYGVFVE-LE TGIEGLVHVSEV--SWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRM-SLSMKRC-------QDNPWQAFTL KYPLGSIVSTKIKNITNLGIFVSFQDNTLNDGIEGLIRTTELSWSL-SPEAAIKKYNVGDSVEAKILMINPN KSKIDLGVKQLEYDP--FL-DL---LKKINLGDKIPVTVTKVVEDTGILVDV------------FNGSNSFN LL---IEQEY----LPDNKKFFPGDRLEAEVLLIETYNMILSLK-------H-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00545121/1-567 RNA binding S1 [Ehrlichia chaffeensis str. Sapulpa]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------MEDLQTKTNLGSENYLHNIKKIKSNKFISHNLEVEDSDNDSSS-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------Q-------HAL---KEFIDDS-- ------------------------------------------------------------------------ --------------------------------------------VK-E----------------G--QIIEG TIICI-D--KGY--VTI-DS--G-L----------------KSESI-VSLKEF-----ELGDDYQNI-SIGS KVKLYLE-KIE--------GRN----GSVV----LSREKA-------IRDELWQKLEEAAEKKE---DVEGV IFS--SIKC-GYT-VDIK-GVVAFLPASHVALRQV---KDITPLLGKKQKFRILKMD-----KKQG-NIVVS RKAILEESLADAKSLYLSQLNEGDIIE----GKVKS-ITKYGVFIEIHESPSVGVVDGLLHITDISWSRVSH PSAVFSCGQTV-KTKIIKIDRENKKISLGVKQLEES--PWSNI-EKKYPVDSIHKGIVTSIEEYGVFVE-LE TGIEGLVHVSEV--SWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRM-SLSMKRC-------QDNPWQAFTL KYPLGSIVSTKIKNITNLGIFVSFQDNTLNDGIEGLIRTTELSWSL-SPEAAINKYNVGDSVEAKILMINPN KSKIDLGVKQLEYDP--FL-DL---LKKINLGDKIPVTVTKVVEDTGILLDV------------FNGSNRFN LL---IEQEY----LPDNKKFFPGDRLEAEVLLIETYNMILSLK-------H-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_154082/1-559 30S ribosomal protein S1 [Anaplasma marginale str. St. Maries]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------MSSGTGLQGSASGSISRMYSNRFVSHGFDDIESG----DADL----------------- ------------------------------------------------------------------------ -------------------------------------------------S-------DAL---SEL--LD-- ---------------------------K----G--------------------------------------- --------------------------------------------PK-E----------------G--EIIEG TVICM-N--GGY--ITV-DA--G-L----------------KSEGV-VSLREF--E-LGDGGQD--V-EVGS KVKLCLE-KIE--------GKS----GSVV----LSREKA-------IRDELWQKLEKAAEEKT---DVEGV IFG--SIRC-GYT-VDVG-GVVAFLPASHVGLRQV---KDITPLLGKKQQFRILKMD-----KKQG-NIVVS RKAVLEESLADAKDSFLSQLEEGSIIE----GKVKS-ITKYGVFIGIHESPSVGVVDGLLHITDISWSRVSH PSAVFSCGQTV-RAKIIRIDRENRKISLGVKQLEES--PWANV-EERYPVDSIHKGIVTSIEDYGIFVE-LE TGVEGLIHVSEV--SWVRSHLPVNQTFMRGEEVEAKVLSLDAAKNRM-SLSIKRC-------KENPWEAFIE KHPVGSVVETRVKSISSLGVFVSFEDDTSGSGIEGLIRSTELSWSG-SPEAALKKYSVGDLVKAKILMVATN KNKIDLGVKQIERDP--FL-DL---LKRVEVGDRVAVTVSKVLEDMGVLVDV------------FEGSESFN VL---VKQEH----LPENKKFFPGDRVEAEVLTVGSYSLVLSLK---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_504887/1-542 ribosomal protein S1 [Anaplasma phagocytophilum HZ]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------MQSNRFVSHGFDEVDLD----KTDL----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DVL---SEL--LD-- ---------------------------G----G--------------------------------------- --------------------------------------------PR-E----------------G--EIIEG TVICK-D--SGY--ITV-DA--G-L----------------KSEGV-VSLREF--E-LGEGKQD--I-EVGS KVKLYLE-KTE--------GKS----GSVV----LSREKA-------VRDELWQKLEQAAAENL---DIEGV IFG--SIKC-GFT-VDVG-GVVAFLPASHVGLRQV---KDITPLLGKKQKFRILKMD-----KKQG-NVVVS RKAVLEESLADAKDSFLSTLEEGSIVE----GKVKS-ITKYGVFIEIHESPTVGVVDGLLHITDISWSRVSH PSAVFSCGQTV-RAKIIRIDRENRKISLGVKQLEES--PWANV-EERYPVGSIHKGTVTSIEDYGIFVE-LE TGVEGLIHVSEV--SWVRSHLPVNQLFMRGEEIEVKVLSIDATKNRM-SLSIKRC-------KENPWEAFIE KHPVGSIVNTKVKSIGNLGMFVSLTDDDTNSGIEGLIRSTELSWSG-SPESALKRYNIGDCLQAKILMVSAN RNKIDLGVKQIEHDP--FL-GL---LRRVGIGERIPVTVSKVLEDVGVMVDV------------FDGSESFN VL---VEQKH----IPEGKKFFPGDRVEAEVLMIGSYSLVLSLE---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >AAM75973/1-518 ribosomal protein S1 [Candidatus Tremblaya princeps]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MH-DH----------------- ------------------------------------------------------------------------ -------------------------------------------------I-------RLL---REYCKYY-- ---------------------------D-------------------------------------------- --------------------------------------------AG-P----------------G--SIVAA RVVAI-S--SNH--VVL-RA--G-L----------------KSDSR-VPLGEF--VSPQGDRLE--V-KVGD VTLAYVE-RDA--------YDE----GTVR----LSRSKA-------RRRVAWGILDSAHRTRG---TIMGT VVG--RVKG-GMT-AVVN-GMRAFLPGSLIDTRPV---KDAERYEGRRLRFHVIKLD-----RKRG-NVVLS RRSVIERRQAENRNRLLASLGDGDVVQ----GVIKN-ITDYGAFIDL------GGLDGLLHITDISWRRIRH PSQVLSVGDRI-TVKVLKFDRTKTRVSLGLKQLHPD--PWAGI-IGRYPAGSRVRGRVTNIADYGLFVE-IE RGIEGLLHVSEM--HQKSKGTISLRHFRVGQYVNVTVLDVSKTRRRI-SLGMKHG-------TLNPWLTFYK GFRKNDRMGAIIRSPVDVGILVD-----LPMGVHGVVCMSKD-----LRRRLLRALCSGGVVEARVVGVDVN RGRISLA-SGFALGP--LG------VRILAPGFIRPGAFVR-MAPPMRPCCL---N------------VRAA PC---AAAKA--------QCALRGAHVAIRLLS--------AISIRPRSVAC------AIR-GAMRANH--- ------------------------GLVPCLP----------------------------------------- ------------------------------------------------------------------------ ------------ >CAJ72617/1-584 strongly similar to 30S ribosomal protein S1 [Candidatus Kuenenia stuttgartiensis]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------MGLETLKRDYLKEYNVNVADIENDVESVMATEDAM----------------- ------------------------------------------------------------------------ ---------------------------------------------------------ENVQSAYYDSVLH-- ------------------------------------------------------------------------ --------------------------------------------FE-V----------------N--SILKG RIISS-I--GDN--VII-DC--G-Y----------------KSEGM-VPKYEF----DDPSEI-----RIGE EIEVLLE-AVE--------DDS----GLIK----LSKRKA-------DRIRGWETVIAKYKEGD---IITGR IIR--KIKG-GLL-VDI--GVPIFLPASQIDVKPP---GDIAQYVGQELTCRILKID-----EERQ-NIVVS RRKLIEEEREKKKKLLLMEIEAGQTRK----GVVKN-IADFGAFIDL------GGMDGLLHITDMSWGRISH PSEMLAIDDEV-EVKILDVDKEKEKVALGLKQKTDN--PWFNI-EEKYPVGSRVKGQVVNIMSYGAFVK-LE TGIEGLVHISEM--SWTRRINHPSEIVAIGDMVEVVVLKIDREKEEI-SLSIKQT-------EVNPWTIIEE KYPAGTKIKGRVRNLTNYGAFIE-----IEEGVDGLLHISDMSWAK-KVAHPSEIVKKGDKIEAVVLSVDRE KKRVALGLKQLQDDP--WEKEI---PEKYKVGDIVKGHVTK-LANFGAFLEL---G----QG--IEGLLHVS EF---SDKKI----SNPADAVNVGDELEVKVIRIEPEARKIGLSLKKIAA-H------PEE-KNNSS----- ---D----------NSSSEKV---VQEEKAEP--SSVVESI------------------------------- ------------------------------------------------------------------------ ------------ >YP_007763/1-587 30S ribosomal protein S1 [Candidatus Protochlamydia amoebophila UWE25]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MFKHPQHTWNESNIV---------------DDVQFQETDAE-LF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------NLL---TQKEALP-- ---------------------------A--DE---------------------------------------- -----------------------------------------NSLMS-P----------------G--SILKG RIVEI-T--KDH--VVV-DV--G-L----------------KSEGL-VPIEEF-----SDPSQ---V-YLDA EVEVLLD-QAE--------DDN----GQIV----LSREKA-------ERLRQWEYILEHCEEGS---IVKGR VIR--KVKG-GLM-VDI--GMEAFLPGSQIDNKRI---KNLDDYLGKTYEFKILKIN-----IERK-NVVVS RRELLEAERISKKAEVLEHIQPSDIRE----GVVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIKH PSEMVQLGQKL-EVMILSVDKDKGRVALGLKQKGPN--PWDQI-EQKYPPGTRVHGKIVNLLPYGAFIE-IE PGIEGLIHVSEM--SWVKNITDPSEVVKKGDDVEAIVLSVQKEEGKI-SLGIKQT-------EHNPWDDVEK KYPVSNIVKAEIRTLTNYGAFVE-----LEPGVEGLIHISDLSWIK-KVSHPSEVLRKGDVVDAIILSVDKE SKKITLGVKQLSTNP--WE-SI---EKTMPVGSLVKGKVTK-ITAFGAFVEL---D----SG--IEGLIHVT EL---SDQAF----GKVEDVVAKGDEVTAKVIKLDPEHKKIALSIKEYLI-D------QNQ-YNRDDIVVTP AKRK----------KKDEQKN---NEDDESGS--EQESEK-------------------------------- ------------------------------------------------------------------------ ------------ >NP_296751/1-536 30S ribosomal protein S1 [Chlamydia muridarum Nigg]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MH-GF----------------- ------------------------------------------------------------------------ ---------------------------------------------------------TAT---EEEPTSE-- ------------------------------------------------------------------------ --------------------------------------------VQ-P----------------G--AILKG TVVDI-S--KDF--VVV-DV--G-L----------------KSEGV-IPMSEF----IDSSEGL----SVGA EVEVYLD-QTE--------DEE----GKVV----LSREKA-------TRQRQWEYILAHCEEGS---IVKGQ ITR--KVKG-GLI-VDI--GMEAFLPGSQIDNKKI---KNLDDYVGKVCEFKILKIN-----VDRR-NVVVS RRELLEAERISKKAELIEQITIGERRK----GIVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIRH PSEMVELNQEL-EVIILSVDKEKGRVALGLKQKEHN--PWEDI-EKKYPPGKRVRGKIVKLLPYGAFIE-IE EGIEGLIHVSEM--SWVKNIVDPNEVVNKGDEVEVVVLSIQKDEGKI-SLGLKQT-------EHNPWDNIEE KYPIGLRVTAEIKNLTNYGAFVE-----LEPGIEGLIHISDMSWIK-KVSHPSELFKKGNTVEAVILSVDKE SKKITLGVKQLTPNP--WD-EI---EAMFPVGSDISGIVTK-ITAFGAFVEL---Q----NG--IEGLIHVS KL---SDKPF----AKIEDILSIGDKVSAKVIKLDPDHKKVSLSIKEFLA---------------------- --------------HGGHAGQDAEEETSSNRD---------------------------------------- ------------------------------------------------------------------------ ------------ >YP_327898/1-569 30S ribosomal protein S1 [Chlamydia trachomatis A/HAR-13]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MPKQADYTWGAKKNL---------------DTIACLPEDVK-QF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLL---YAMHGFT-- ---------------------------A--TEEE-------------------------------------- ----------------------------------------PTSEVH-P----------------G--AILKG TVVDI-S--KDF--VVV-DV--G-L----------------KSEGV-IPMSEF-----IDSSEG--L-TVGA EVEVYLD-QTE--------DDE----GKVV----LSREKA-------TRQRQWEYILAHCEEGS---IVKGQ ITR--KVKG-GLI-VDI--GMEAFLPGSQIDNKKI---KNLDDYVGKVCEFKILKIN-----VDRR-NVVVS RRELLEAERISKKAELIEQITIGERRK----GIVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIRH PSEMVELNQEL-EVIILSVDKEKGRVALGLKQKEHN--PWEDI-EKKYPPGKRVRGKIVKLLPYGAFIE-IE EGIEGLIHVSEM--SWVKNIVDPNEVVNKGDEVEVVVLSIQKDEGKI-SLGLKQT-------KHNPWDNIEE KYPIGLRVTAEIKNLTNYGAFVE-----LEPGIEGLIHISDMSWIK-KVSHPSELFKKGNTVEAVILSVDKE SKKITLGVKQLTPNP--WD-EI---EAMFPVGSDISGVVTK-ITAFGAFVEL---Q----NG--IEGLIHVS EL---SEKPF----AKIEDVLSIGDKVSAKVIKLDPDHKKVSLSIKEFLV---------------------- ---------------HGGDAGHDAEEESSDRD---------------------------------------- ------------------------------------------------------------------------ ------------ >NP_219601/1-569 30S ribosomal protein S1 [Chlamydia trachomatis D/UW-3/CX]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MPKQADYTWGAKKNL---------------DTIACLPEDVK-QF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLL---YAMYGFT-- ---------------------------A--TEEE-------------------------------------- ----------------------------------------PTSEVH-P----------------G--AILKG TVVDI-S--KDF--VVV-DV--G-L----------------KSEGV-IPMSEF-----IDSSEG--L-TVGA EVEVYLD-QTE--------DDE----GKVV----LSREKA-------TRQRQWEYILAHCEEGS---IVKGQ ITR--KVKG-GLI-VDI--GMEAFLPGSQIDNKKI---KNLDDYVGKVCEFKILKIN-----VDRR-NVVVS RRELLEAERISKKAELIEQITIGERRK----GIVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIRH PSEMVELNQEL-EVIILSVDKEKGRVALGLKQKEHN--PWEDI-EKKYPPGKRVRGKIVKLLPYGAFIE-IE EGIEGLIHVSEM--SWVKNIVDPNEVVNKGDEVEVVVLSIQKDEGKI-SLGLKQT-------KHNPWDNIEE KYPIGLRVTAEIKNLTNYGAFVE-----LEPGIEGLIHISDMSWIK-KVSHPSELFKKGNTVEAVILSVDKE SKKITLGVKQLTPNP--WD-EI---EVMFPVGSDISGVVTK-ITAFGAFVEL---Q----NG--IEGLIHVS EL---SEKPF----AKIEDVLSIGDKVSAKVIKLDPDHKKVSLSIKEFLV---------------------- ---------------HGGDAGHDAEEESSDRD---------------------------------------- ------------------------------------------------------------------------ ------------ >NP_224520/1-580 30S ribosomal protein S1 [Chlamydophila pneumoniae CWL029]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MPKQAEYTWGSKKIL---------------DNIECLTEDVA-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLL---YTAHRIT-- ---------------------------S--SEEE-------------------------------------- ----------------------------------------SDNEIQ-P----------------G--AILKG TVVDI-N--KDF--VVV-DV--G-L----------------KSEGV-IPMSEF-----IDSSEG--L-VLGA EVEVYLD-QAE--------DEE----GKVV----LSREKA-------TRQRQWEYILAHCEEGS---IVKGQ ITR--KVKG-GLI-VDI--GMEAFLPGSQIDNKKI---KNLDDYVGKVCEFKILKIN-----VERR-NIVVS RRELLEAERISKKAELIEQISIGEYRK----GVVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIRH PSEMVELNQEL-EVIILSVDKEKGRVALGLKQKEHN--PWEDI-EKKYPPGKRVLGKIVKLLPYGAFIE-IE EGIEGLIHISEM--SWVKNIVDPSEVVNKGDEVEAIVLSIQKDEGKI-SLGLKQT-------ERNPWDNIEE KYPIGLHVNAEIKNLTNYGAFVE-----LEPGIEGLIHISDMSWIK-KVSHPSELFKKGNSVEAVILSVDKE SKKITLGVKQLSSNP--WN-EI---EAMFPAGTVISGVVTK-ITAFGAFVEL---Q----NG--IEGLIHVS EL---SDKPF----AKIEDIISIGENVSAKVIKLDPDHKKVSLSVKEYLA--------DNA----------- ---------------YDQDSRTELDFKDSQGPKERKK-----------KGK--------------------- ------------------------------------------------------------------------ ------------ >YP_219867/1-581 30S ribosomal protein S1 [Chlamydophila abortus S26/3]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MPKQSEYTWGSKKIL---------------DTIDCLSEDVV-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLL---CSTHGIT-- ---------------------------S--SDEE-------------------------------------- ----------------------------------------PTSEIQ-P----------------G--AILKG TVVDI-N--KDF--VVV-DV--G-L----------------KSEGV-IPMSEF-----IESSEG--L-VLGA EVEVYLD-QTE--------DEE----GKVV----LSREKA-------TRQRQWEHILAHCEEGS---IVKGQ IIR--KVKG-GLI-VDI--GMEAFLPGSQIDNKKI---KNLDDYVGKVCEFKILKIN-----IDRR-NVVVS RRELLEAERISKKAELIEQITIGERRK----GIVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIRH PSEMVELNQEL-EVVILSVDKEKGRVALGLKQKEHN--PWEDI-EKKYPPGKRITGKIVKLLPYGAFIE-IE EGIEGLIHVSEM--SWVKNVVDPSEVVNKGDEVEAIVLSIQKDEGKI-SLGLKQT-------EHNPWDNIEE KYPIGLHVRAEIKNLTNYGAFVE-----LEPGIEGLIHISDMSWIK-KVSHPSELFKKGSIVEAVILSVDKE SKKITLGVKQLSSNP--WN-EI---EEMFPTGSVISGVVTK-ITAFGAFVEL---Q----NG--IEGLIHVS EL---SEKPF----SKIEDIISIGDSVSAKVIKLDPDHKKVSLSVKEYLA--------DKQHDQTDTDI--- ------------------DDL---DLEDLVSS--DKKKKGK------------------------------- ------------------------------------------------------------------------ ------------ >NP_829334/1-581 30S ribosomal protein S1 [Chlamydophila caviae GPIC]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MPKQSEYTWGSKKIL---------------DTIDCLAEDVV-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLL---CSTHGIT-- ---------------------------S--SDEE-------------------------------------- ----------------------------------------TTSEIQ-P----------------G--AILKG TVVDI-N--KDF--VVV-DV--G-L----------------KSEGV-IPMSEF-----IDSSEG--L-VLGA EVEVYLD-QTE--------DEE----GKVV----LSREKA-------TRQRQWEHILAHCEEGS---IVKGQ IIR--KVKG-GLI-VDI--GMEAFLPGSQIDNKKI---KNLDDYVGKVCEFKILKIN-----IDRR-NVVVS RRELLEAERISKKAELIEQINIGERRR----GIVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIRH PSEMVELNQEL-EVIILSVDKEKGRVALGLKQKEHN--PWEDI-EKKYPPGKRIVGKIVKLLPYGAFIE-IE EGIEGLIHVSEM--SWVKNVVDPSEVVNKGDEVEAIVLSIQKDEGKI-SLGLKQT-------EHNPWDNIEE KYPIGLHVHAEIKNLTNYGAFVE-----LEPGIEGLIHISDMSWIK-KVSHPSELFKKGSTVEAVILSVDKE SKKITLGVKQLSSNP--WN-EI---EEMFPTGSNISGVVTK-ITAFGAFVEL---Q----NG--IEGLIHVS EL---SEKPF----SKIEDIISIGDSVSAKVIKLDPDHKKVSLSVKEYLA--------DKQHDHMDTDL--- ------------------NNL---DLDDLVGS--DKKKKGK------------------------------- ------------------------------------------------------------------------ ------------ >YP_515457/1-581 30S ribosomal protein S1 [Chlamydophila felis Fe/C-56]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MPKQSEYTWGSKKIL---------------DTIDCLAEDVV-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLL---CSTHGIT-- ---------------------------S--SDEE-------------------------------------- ----------------------------------------PTSEIQ-P----------------G--AILKG TVVDI-N--KDF--VVV-DV--G-L----------------KSEGV-IPMSEF-----IESSEG--L-VLGA EVEVYLD-QAE--------DEE----GKVV----LSREKA-------TRQRQWEHILAHCEEGS---IVKGQ IIR--KVKG-GLI-VDI--GMEAFLPGSQIDNKKI---KNLDDYVGKVCEFKILKIN-----IDRR-NVVVS RRELLEAERISKKAELIEQITIGERRK----GVVKN-ITDFGVFLDL------DGIDGLLHITDMTWKRIRH PSEMVELNQEL-EVIILSVDKEKGRVALGLKQKEHN--PWEDI-EKKYPPGKRVSGKIVKLLPYGAFIE-IE EGIEGLIHVSEM--SWVKNVVDPSEVVNKGDEVEAIVLSIQKDEGKI-SLGLKQT-------EHNPWDNIEE KYPIGLHVHAEIKNLTNYGAFVE-----LEPGIEGLIHISDMSWIK-KVSHPSELFKKGSTVEAVILSVDKE SKKITLGVKQLSSNP--WN-EI---EKMFPTGSNISGVVTK-ITAFGAFVEL---Q----NG--IEGLIHVS EL---SEKPF----SKIEDIISIGDSVSAKVIKLDPDHKKVSLSVKEYLA--------DKQNDQTDADL--- ------------------NNL---DLEDLVGS--DKKKKGK------------------------------- ------------------------------------------------------------------------ ------------ >YP_825545/1-571 ribosomal protein S1 [Solibacter usitatus Ellin6076]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MAVDQNNEQVDQTVPE-SY----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------HLL---EDY--SH-- ------------------------------------------------------------------------ --------------------------------------------FAPP----------------SADEVVQG TVLGI-T--VKD--VII-DF--G-Y----------------KSEGI-VPIEQF--Q-SPSGEVT--V-KRGD VVDVMID-RSE--------QVE----GYVL----LSHTKA-------ARLRIWDNLEHAANEQL---VLSGR VLG--RVKG-GLA-VDV--GIKAFMPGSQADPRPV---HNLDALVGQDIPVKIIKLN-----RRRG-NVVVS RKMAIEEEINSRKTVTLDHLFEGAAVT----GTVKN-LTDYGAFIDL------GGIDGLLHVTDMSYGRITH PSEMLQVGQEI-TVKVLKFDRTKERVSLGIKQLEPD--PWDTV-IERYPVNGRVIGRVVNVTDYGAFVE-LE PGVEGLIHISEM--TWSRRMKHPSKVVKAGDQVEAVVLEVHPKDRRI-SLGLKQL-------EPNPWTTIDQ RYSVGSVVEGRVRNMTDFGAFIE-----IEEGIDGLVHVSDLSWTK-RVKHPSEVLKKGMIVQAVILNIDSS SHRLSLGIKQLQPDA--WE-SY---FQTHQVGDTVHGRVCR-IASFGPFVEL---A----EG--VEGLCHFS EIPGYSNRR-----GAEEMPVHIGDEYDFKIIKMSEAEKKIGLSLRAVTE--------DEEKTRLEDYQ--- ----------------RQAAAATTTIEEVMSL----------------KDRNQE------------------ ------------------------------------------------------------------------ ------------ >YP_593735/1-609 ribosomal protein S1 [Acidobacteria bacterium Ellin345]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ MPFDDPNVTSSTEQSEEHGAAASQQPVAVQAHNPPEAKPTAGRPRNEENMTE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------TALESFEQEQSEQ-- ---------------------------A-------------------------------------------- --------------------------------------------LN-E----------------D--RVLVG RVLSI-T--PQY--VVV-DV--G-L----------------KSEGV-VPIEEV--K-DHDGNVS--F-QPGE EIAVMQE-KGH--------TEE----GYVH----LSHQKA-------QRLKAWDEIEKAYNDKS---SIKAR AID--RIKG-GLT-VDIM-GARAFLPGSQVDLRPV---RNLDALKGHELEVRIIKLN-----KKRG-NIVVS RKQILEEEQNDKKSKTLEHLNEDAVLT----GTVKN-LTDYGAFVDL------GGIDGLLHITDMSWGRLTH PRDLVQVGDQI-QVKVLKFDRDKQRVSLGFKQLTPD--PWLDA-SERYPIGARVHGRVISVTDYGAFIE-LE QGIEGLVHVSEM--TWSKRMKHPSKIVNVGDQVDAVVLNVNPQERRI-SLGLKQL-------ETNPWESLHE KFPVGGVVEGKVRNLTDFGAFIE-----IEDGIDGLVHVSNLSWTK-RVKHPSEVLKKGDKVKAVVLAIEPD NRRLSLGVKQLQPDV--WE-TF---FETHRVGDIIHGKVLR-LASFGAFIEI---A----DG--VEGLCHNS EA---SDE------HGAPLKLEPGQEFDFKIIKMNPDEKKVGLSLRAVGE--------EASRVEIENYK--- --------------APASSSPGAATIGELLSW----------------KREQQD------------------ ------------------------------------------------------------------------ ------------ >YP_461295/1-586 SSU ribosomal protein S1P [Syntrophus aciditrophicus SB]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------MVNDDNLISEQKEEKGEGGGNQQNQNSEDMMGF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELY---EQS--LQ-- ---------------------------S-------------------------------------------- --------------------------------------------VH-L----------------G--ELVTG KIVQI-N--SDM--VMV-DV--G-W----------------KTEGY-IPAKEL--R-DEEGNIA--V-NVGD EIEVMVE-RRD--------QE-----GNLV----LSRDKA-------AKMKIWDDVKAACDNNL---PVKGM IVE--RVKG-GLS-VDI--GISAFLPGSQVDIRPV---RDLDKYVGQTLMFDVLKYD-----RKRN-NVVLS RRSILEQEREVEKQETLANISEGVVVE----GIIKN-ITDYGLFIDL------GGIDGLLHVTDISWGRITK PSEAFNRGDKI-TVKVLSFDREKERVSLGLKQLTEN--PWEMI-TEQYPVGAIVEGKVVNLTDYGAFVE-LA PGVEGLIHVSEM--FWTREIRHPSKVLSLGQNVKVMILDVNKENKRI-SLGLKQT-------TDNPWETLKQ KYPEGTLIKGVIRNVTNFGIFVG-----VEDGIDGLVHVSDISWKQ-RVKHPSEIYKKGQEIEAVVLNIDVE SEKFSLGIKQIEKNP--WE-EF---CEKYTAGSIVSGKVTN-LTEFGIFVEV---E----EG--IEGLVHIS EL---SHKRV----KTASEIFSIGDAVSAVVKSVDVKGRKIRLSIKDTEV-N------PEAGRSVSQYL--N N--------------RENVGS---SLGKALAD--LDVKLTD-------PNN--------------------- ------------------------------------------------------------------------ ------------ >YP_595130/1-574 ribosomal protein S1 [Lawsonia intracellularis PHE/MN1-00]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------METEE---------------TMENNGTDLDF-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------SAL---EDY--LS-- ---------------------------T----DF-------------------------------------- ----------------------------------------GD--LE-E----------------G--TIVKG EIVRI-D--DDN--VLV-DV--N-F----------------KSEGQ-IPTIEF---QNTDGNIT--A-KVGD KIDVFVV-RKN--------EQE----GTII----LSFEKA-------KRMQLFDQLEDLQEKNG---IIKGR IVR--RIKG-GYT-IDLR-GVEAFLPGSHVDLRPV---PDMDMLVNQEYEFRVLKIN-----RRRS-NVIVS RRVLLEEERDSKRQDLLQTISEGQVVV----GKVKN-VTEYGVFVDL------GGLDGLLHITDMSWKRIRH PREMVNLGQEL-ELKVLSFDKENQKVSLGLKQLVPD--PWQDI-TERFPETSHHVGKVTNLVDYGVFVE-LE SGVEGLVHISEM--SWTRKLRHPSQMVHQGDEVEVVILGIDQDKKRI-SLGMKQV-------KPNPWELVGE KYPEGTILEGVVKNITEFGMFIG-----IEDGIDGLIHVSDISWTK-KVRHPNELFKVGDTVQAKVLTVDQE NEKFTLGIKQLTEDP--WS-NA---PSVYPVGGIVKGIITN-ITDFGLFVEV---E----EG--IEGLVHVS EL---SSKKI----KSPSEIYKDGEEIQAKIIHVSAEERRLGLSIKQLKE-D------EEH-RKSREYS--R TGP------------D--SGQ---SLGDLLKM---KLEE-P-------TEN--------------------- ------------------------------------------------------------------------ ------------ >YP_012360/1-577 ribosomal protein S1 [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------MATTPE---------------TMENHAFDADM-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------SAL---ENY--LS-- ---------------------------S----DF-------------------------------------- ----------------------------------------GD--LE-E----------------G--SIVKG EIVRL-G--DDY--VLV-DV--N-F----------------KSEGQ-IAANEF---RDANGDLI--I-GVGD RVDVFVV-RKN--------EME----GTIT----LSYEKA-------KRMQLFDQLEEVQEKNG---VIKGR IVR--RIKG-GYT-VDLG-GVEAFLPGSHVDLRPV---PDMDALVNQEYEFRVLKIN-----RRRS-NVIVS RRVLLEEERDSKRQDLLRTLEEGQVVK----GKAKN-ITEYGVFVDL------GGLDGLLHITDMSWKRIRH PKELVSLGQEL-ELKVLSFDRDSQKVSLGMKQLVAD--PWQDI-TAKFPEGLRGQGKVTNLVDYGAFVE-LE PGVEGLVHISEM--SWTRKLRHPSQMVRVGDEVEVVILGVDPDKKRI-SLGMKQV-------KPNPWEVVAE KYPEGTILEGVIKNITEFGMFIG-----IEDGIDGLIHVSDISWTK-KIRHPNEMYKVGDVVQAKVLTVDQE NEKFTLGVKQLAEDP--WS-RV---PATYPVGTLVTGSVTN-ITDFGLFVEV---E----EG--IEGLVHVS EI---SQKKI----KSPSEIYKEGQEIQAKVIHVSAEERRLGLSIKQLKD-E------EER-RKPKEF---R SGS------------PEVGGQ---TLGDILKL---KLEEDA-------ADN--------------------- ------------------------------------------------------------------------ ------------ >YP_387003/1-574 ribosomal protein S1 [Desulfovibrio desulfuricans G20]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MTTETIDTSLDAEMSF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------SAL---ENYLSSD-- ------------------------------FGD--------------------------------------- --------------------------------------------LE-E----------------G--SIVKG EVVRV-D--GDY--VLV-DV--N-F----------------KSEGQ-IAASEF--K-DAEGNLA--I-KVGD TVDVFVA-RKN--------EME----GTIT----LSFEKA-------KRMQVFDKLEEVQESEG---TTCGR IIR--RIKG-GYT-VDLG-GVEAFLPGSHVDLRPV---PDMDALVNQEFDFRVLKIN-----RRRS-NVIVS RRVLLEEERDSKRQDLLKTLEEGQIVT----GKAKN-ITEYGVFVDL------GGLDGLLHITDMSWKRIRH PKELVSLGQEL-ELKILSFDRDSQKVSLGMKQLVND--PWADI-TSKYPENARLNGKVTNLVDYGAFVE-LE PGVEGLVHISEM--SWTRKLRHPSQMVRVGDEVEVVILGVDPDKKRI-SLGMKQV-------KPNPWEVVAE KYPEGTILEGVIKNITEFGMFIG-----IEDGIDGLIHVSDISWTK-KIRHPNELYNVGDTVQAKVLTVDQE SEKFTLGVKQLTEDP--WS-KV---PANYPVGTLVNGVVTN-ITDFGLFVEV---E----EG--IEGLVHVS EI---SQKKV----KSPSEMFKEGVTIQAKVIHVSAEERRLGLSIKQIKD-D------EER-RRPKEF---R SGP------------AEAGGQ---TLGDILKL---KLEEDA-------ADN--------------------- ------------------------------------------------------------------------ ------------ >AAR37434/1-589 ribosomal protein S1 [uncultured bacterium 105]. ------------------------------------------------------------------------ ----------------------------------------------------------------------MA SADETENIELTQGGPDSTVVKSEPHD---------------LVEDPDTPDPD-EY----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------RLLELYDSS--FR-- ---------------------------N-------------------------------------------- --------------------------------------------IA-E----------------G--EVVSG TVLQV-T--SSE--VVV-DV--G-Y----------------KSEGM-IAIEEF---RNERGEIV--V-QMGD IVDVLLE-RTE--------DRH----GYVV----LSREKA-------EKMKIWDEIEKAYNDQK---VVIGH VIE--RIKG-GLA-VDI--GVRAFLPGSQIDVRPV---RNLDSLRGEELRMRVIKVN-----KKRG-NIVLS RKVLLEEENADKKQKTLSTLAEGKVIK----GIVKN-LTDYGAFVDL------GGFDGLLHITDMSWGRVSH PSELFKINDEA-EVIVLKFDPETERVSLGYKQLIAD--PWDGV-GDRYPVNERVNGRIVSLTDYGAFVE-LE PGVEGLIHVSEM--SWSKRVKHPSKILTVGDTVEALVLAVDPNARRI-SLGLKQI-------EVNPWLQIAD RYPLGTKITGTVRNVTEFGAFVE-----VEEGVDGLIHISDMSWSK-RLQHPSEVVNKGDEVESVVLNVDAE NQRLSLGLKQLSTDI--WD-EF---LSNNSAGDVVEGKIVK-LTNFGAFVEL---A----DG--IEGLIHIS EF---DDEQG----DEKIEL-EVDQAYSMKIIKLSAVDRKIGLSIRALKL-G------DEA-VDWTSQD--E Q--------------SSSPEA---TLGDHFK----GLQE--------------------------------- ------------------------------------------------------------------------ ------------ >NP_968001/1-595 30S ribosomal protein S1 [Bdellovibrio bacteriovorus HD100]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------MNKAALEKQKVLAFLDAEDAKVPANPGILNAKADKAGDF----------------- ------------------------------------------------------------------------ -------------------------------------------------D-------SLF---EAS--MK-- ------------------------------EQD--------------------------------------- --------------------------------------------FK-V----------------G--DVVTG SVVEV-Q--SDY--VLV-DI--N-Y----------------KSEGL-IAINEF--R-IVDGVRD--V-KAGD KVEVLID-RIE--------NEN----GMIV----LSKDKA-------DMLRAWTDISKAAENEE---VIEGT VVA--KVKG-GLS-VDI--GVKAFLPGSQIDLRPV---RNMDVYLGKKFKFKVIKFN-----KKRG-NIVLS RRALLEEERDSLRSQTLDTMAEGSVVT----GVVKN-ITDYGAFIDL------GGMDGLLHITDMSWGRVKH PSEMLNVGDEI-QVKVLKYDKEKERVSLGMKQLHAD--PWESV-KASYPPGTKLKGKVVSLAEYGAFVE-LG EGIEGLIHVSEM--SWTKRVKHPSQIVTVDQEVEVVVLEVDTENRRI-SLGMKQL-------QANPWVEMKE SYAPGTIIEGEVKSVTDFGIFIG-----IEEGIDGLVHISDFSWTK-RVNHPNELYAKGQKVRAVVLGVDIE NERFSLGIKQLESDP--WS-NI---ENKYAIGTQHDVKVTK-TADFGAFVEL---E----SD--IEGLIHIS EL---TTEKI----NSVEEFIKPGQSVKAEVISIDKDARKIGLSAKLVKL-R------ESK-ADVDDYV--K KA-------------TATSKS---TFGDLFAD---QLKNVK-------TDKQ-------------------- ------------------------------------------------------------------------ ------------ >YP_846236/1-596 ribosomal protein S1 [Syntrophobacter fumaroxidans MPOB]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MVDKDEVTGQDVTELGADTSMADDSNIEGEIEDMD-SM----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLY---EQS--FR-- ---------------------------N-------------------------------------------- --------------------------------------------IQ-E----------------G--EVIRG RIVQI-S--DDY--VMV-DI--G-Y----------------KSEGQ-ISVHEF--K-DEKGVVQ--A-AIGD DVDVLLE-FHD--------DED----GTIH----LSKEKA-------AKIKVWDDISRIYNEDG---IIEGK VVS--KVKG-GLA-VDI--GVQAFLPGSQVDLRPV---RNLEFLIGQTFPFKVLKYN-----KKRR-NVVLS RRALLEKEREQMKSQTLANLEDGKVVE----GIVKN-ITDYGVFVDL------GGIDGLLHITDMSWGRVGH PSELFQIGDRI-KVMVLSFDRDHERVSLGLKQLVAD--PWTRA-ESKYPIGTRVNGRVVSLTDYGAFVE-IE EGVEGLIHVSEM--SWTKKVRHPSKVLNVGDEVEAVVLSINPENKRI-SLGMKQL-------EPNPWDIIAQ KYPVGTTIAGKIKNITDFGVFIG-----IDEGIDGLVHISDISWTK-RVKHPSEVFRKNQEVQAIVLNIDKD NERFSLGIKQLEPDP--WE-SI---PERYPLGSVISGPITN-VTDFGLFVEL---E----EG--IEGLVHVS EI---SKEKI----KSPVGQYKTAERITAKVINISPKDRKIGLSIKKVEE--------QEERSNYDDYM--- ----------------NSAKAATSNLGELLKE---ELEAARANNPTPNDKS--------------------- ------------------------------------------------------------------------ ------------ >YP_064635/1-570 30S ribosomal protein S1 [Desulfotalea psychrophila LSv54]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------MTE---------------DMKISG--QEL-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELFEM-EEN--NK-- ---------------------------V-------------------------------------------- --------------------------------------------VE-V----------------G--DVAIG TIIGS-V--DDH--FLV-DV--G-D----------------KAESY-IAKSEF---RLED-DTE--V-VVGD TFEVFVE-RRK--------EEG----G-LL----LSREKA-------IAIKVWEDIAKIQEEDS---TIEGR IES--RVKG-GMS-VDI--GVPAFLPYSQIDLRPV---KDLDALIGESLEFKVLKFN-----KKRN-NVVIS RRAILEEARNKLREEMRSKLEEGQIIK----GAITN-ITDYGLFIDM------GGMDGLCHITDLSWGRVSH PAKLYKVGEEL-EVKVLKYDKEHDRVSLGVKQLRDD--PWATV-VDRYPVSQQATGKVVSITDYGVFVE-LE EGVEGLIHVSEM--TWSKKPRHPSKMVAVGDEIEVMVLNIETETKRI-SLGMKQL-------QPNPWDLVTE NYPVGSIIEGKIKNITDFGVFIG-----IEEGIDGLIHVSDLSWTE-RIKHPTEKYAKGEMIQAVVLKIDKE NERFSLGVKQLIPDP--WQEAY----NNYPSGTVVEGEITN-VTDFGVFVKL---E----EG--IEGLVHVS EI---SKDKI----KTPVGMYQVGDTLKAIVINVSAKDRKIGLSVKTLEG--------EDEEVVVEKFK--- ------------KAEKVASEAAPSTFGDLLKAAAVGTDSEQ------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01290232/1-570 Ribosomal protein S1 [delta proteobacterium MLMS-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------MANHPDTTTTLPTEGE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---EQS--IQ-- ------------------------------------------------------------------------ --------------------------------------------VADV----------------G--EVVNG EVIAV-G--KDY--VLV-DI--G-D----------------KSEGE-IDITEF--R-NEEGEIE--V-KVGD TFEVYVE-KRE--------PE-----GGIK----LSRERA-------IGIKVWEEIARIQEADS---TIAGR IDS--RVKG-GLS-VDI--GVPAFLPYSQIDLRPV---RDLDALIGESFDFKILKFN-----RRRN-NVVIS RRAIMEEARQQLRNEMRGTLEEGQVLT----GTVTN-ITDYGVFVDL------GGMDGLCHITDLSWGRVSH PSKMFKVGDEI-QVKVLKYDQENDKVSLGVKQLKSD--PWETI-QQRYPVGAKVPGKVVSITDYGAFVE-LE EGVEGLVHISEM--SWSKKSRHPSKIVTVGDEVEVSVLNVDPEAKRI-SLGMKQL-------QPNPWDMVAE NYPAGSIIEGKIKNITDFGIFIG-----IEEGIDGLIHVSDLSWTE-RIKHPGEKYAKGETIQAVVLKIDKE NERFSLGIKQLQPDP--WE-AA---VEKYAIGTKLEGKITN-VTDFGVFVEL---E----EG--IEGLIHVS EL---SKEKV----ETPVGLYNVGDTIEARVINVSAKDRKIGLSIKALSG--------EDEEARLEDFK--- ---------------QQQAKSGPSTLGDLLKEEMNRDKDEA------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01289978/1-530 Ribosomal protein S1 [delta proteobacterium MLMS-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------A---------------------- ------------------------------------------------------------------------ -----------------------------------------------V----------------G------- ---------KDY--VLV-DI--G-D----------------KSEGE-IDITEF--R-NEEGEIE--V-KVGD TFEVYVE-KRE--------PE-----GGIK----LSRERA-------IGIKVWEEIARIQEADS---TIAGR IDS--RVKG-GLS-VDI--GVPAFLPYSQIDLRPV---RDLDALIGESFDFKILKFN-----RRRN-NVVIS RRAIMEEARQQLRNEMRGTLEEGQVLT----GTVTN-ITDYGVFVDL------GGMDGLCHITDLSWGRVSH PSKMFKVGDDI-QVKVLKYDQENDKVSLGVKQLKSD--PWETI-QQRYPVGAKVPGKVVSITDYGAFVE-LE EGVEGLVHISEM--SWSKKSRHPSKIVTVGDEVEVSVLNVDPEAKRI-SLGMKQL-------QPNPWDMVAE NYPAGSIIEGKIKNITDFGIFIG-----IEEGIDGLIHVSDLSWTE-RIKHPGEKYAKGETIQAVVLKIDKE NERFSLGIKQLQPDP--WE-AA---VEKYAIGTKLEGKITN-VTDFGVFVEL---E----EG--IEGLIHVS EL---SKEKV----ETPVGLYNVGDTIEARVINVSAKDRKIGLSIKALSG--------EDEEARLEDFK--- ---------------QQQAKSGPSTLGDLLKEEMNRDKDEA------------------------------- ------------------------------------------------------------------------ ------------ >YP_464730/1-568 ribosomal protein S1 [Anaeromyxobacter dehalogenans 2CP-C]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------MENQTPRTPDVETE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------TLFAASEAS--AG-- ---------------------------P-------------------------------------------- --------------------------------------------IE-E----------------G--KVVNG TVIQL-T--KDY--AVI-DI--G-Y----------------KSEGQ-VPISEF--STAPGGEPA--V-KVGD KVEVLVE-SRE--------NDT----GMVV----LSKEKA-------DKMRIWDEISAACERDE---LVEGV IVG--RVKG-GLS-VDI--GVKAFLPGSQVDIRPV---RNLDKLIGEKFKFKVIKFN-----KKRG-NIVLS RRVLLEKEREELKKETLKNLKEGAILK----GVVKN-LTDYGAFIDL------GGIDGLLHVTDMSWGRIGH PSEMFEVGQEV-RVVVLKFDPTSERVSLGLKQIQED--PWHRA-DEKYPVGTRVKGKVVSLTDYGAFIE-LE QGVEGLVHVSEM--SWTKRVKHPSKLVNVGDQVEAVVLDIDPKAKRI-SLGMKQI-------EANPWTLLED KYPIGTTIRGEVRNVTDFGIFVG-----VEEGIDGLVHVSDISWTE-RIKHPGEKFKKGDVVEAVVLNIDVE NERFSLGIKQAHVDP--WT-TL---SERHPVGARVKGRVTK-VTDFGAFVEI---E----PG--IEGLVHVS EM---KDERV----ENPRDVVQEGQEVEVKVIDMDLQDRKVALSMKAVNR-D------GGE-DDYREYL--- ---------------RRQGDG-RARLGDLMEKFNRRK----------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01467579/1-571 ribosomal protein S1 [Stigmatella aurantiaca DW4/3-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------MQQNVNQ---------------QIGPEA--GDE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AMF---EAS--LK-- ---------------------------E----RG-------------------------------------- ----------------------------------------GDGILK-E----------------G--EIVKG TVVQV-T--KDY--AIV-DI--G-Y----------------KSEGQ-VPISEF---TSPRGEIT--V-KAGD AVEVLLE-SRE--------NDT----GMVV----LSKEKA-------DKMRIWDEISAACERDE---IVKGT IVG--RVKG-GLS-VDI--GVKAFLPGSQVDIRPV---RNLDQYISKEFEFKVIKFN-----KKRG-NIVLS RRVLLEKQREEMKKETLKNLKEGAVLK----GVVKN-LTDYGAFIDL------GGIDGLLHITDMSWGRIGH PSEMFNVGDEV-RVVVLKFDPAQERVSLGLKQIQED--PWHRA-DEKYPVGTRVRGKVVSITDYGAFIE-IE QGVEGLVHVSEM--SWTKRLKHPSKILEVGQEVEAVVLDIDPKAKRI-ALGMKQI-------EQNPWTLLED KYPIGSVIKGQIRNVTDFGIFVG-----VEEGVDGLVHVSDISWTQ-RIKHPGELYKKGDEVEAVXLNIDVE NERFSLGIKQLQPDP--WE-TL---SERTPVGSRVKGKVTK-VTDFGAFVEI---E----PG--IEGLVHVS EL---REERV----ENPRDVVQEAQEVDVKIIDINTQDRKVALSIKALIG-E------GS--DDYREYL--- ---------------RKQAEGSKARLGDVMAS-KLKK----------------------------------- ------------------------------------------------------------------------ ------------ >YP_631975/1-570 ribosomal protein S1 [Myxococcus xanthus DK 1622]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------MQQNVNQ---------------QVGMDG--GDE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AMF---EAS--LK-- ---------------------------E----RG-------------------------------------- ----------------------------------------GDGILK-E----------------G--EIVKG TVVQV-T--KDF--AIV-DI--G-Y----------------KSEGQ-VPISEF---TNPRGEVS--V-QAGD PVEVLLE-SRE--------NDT----GMVV----LSKEKA-------DKMRIWDEISAACERDE---IVKGT IVG--RVKG-GLS-VDI--GVKAFLPGSQVDIRPV---RNLDQYISKEFEFKVIKFN-----KKRG-NIVLS RRVLLEKQREEMKKETLKNLKEGAVLK----GVVKN-LTDYGAFIDL------GGIDGLLHITDMSWGRIGH PSEMFNVGDEV-RVVVLKFDPTQERVSLGLKQIQED--PWHRA-DEKYPVGTRVRGKVVSITDYGAFIE-IE QGVEGLVHVSEM--SWTKRLKHPSKILEVGQEVEAVVLDIDPKAKRI-ALGMKQI-------EQNPWTLLED KYPIGSVIKGQIRNVTDFGVFVG-----VEEGVDGLVHVSDISWTV-RIKHPGEMFKKGDEVEAVVLNIDVE NERFSLGIKQLQPDP--WE-TL---SERLPVGSRVKGKVTK-VTDFGAFVEI---E----PG--IEGLVHVS EL---KEERV----ENPRDVVQEAQDVEVKIIDINTPDRKVALSMKALIG-E------G---EDYREYL--- ---------------RKQAEGSKARLGDVMAS-KLKK----------------------------------- ------------------------------------------------------------------------ ------------ >YP_357293/1-573 30S ribosomal subunit protein S1 [Pelobacter carbinolicus DSM 2380]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------MVEAKENNNTDEFMDDEFEDMEQSF----------------- ------------------------------------------------------------------------ -------------------------------------------------S-------ELF---ENS--IK-- ---------------------------E-------------------------------------------- --------------------------------------------LN-V----------------G--DVVEG TVLQI-N--GDM--VVV-DV--G-Y----------------KSEGI-IPLAEF--A-DESGQVD--I-KVGD KIDVLFE-RRE--------NEN----GLIS----LSKEKA-------DRQKIWNSLEEDA-------VVEGR IAA--RIKG-GLS-VDI--GVNAFLPGSQVDLRPV---RNLDKLLGETFEFKIIKLN-----KRRG-NIVLS RRVLLEEQRESLRQDTLETLAEDQEVV----GVVKN-LTDYGAFIDL------GGIDGLLHITDMSWGRVAH PSDVLAVGDKI-KVKVLKFDREKERVSLGLKQLTAD--PWLSV-AEKYPTGNRVSGKVVSLTDYGAFVE-LD EGVEGLIHVSEM--SWTKRIKHPSKILNIGDDIESVVLAVDVSNRRI-SLGLKQI-------ERNPWEVIGE KFPIGTIIEGQVKNITDFGIFVG-----VDDGIDGLVHISDLSWTK-RIKHPSELFKKGDVVKAVVLNIDQE NERFSLGIKQLASDP--WQ-TI---ATRYAPGTMISGKVTS-VTDFGIFLEV---E----EG--IEGLIHVS EI---SKEKV----DSPKDFAKVGDNLEAVVLHVDTEDKKIALSIKHVAH-Q------KEK-AEVDAFL--- ---------------GSQKSA-TSNLGDIFKG-AMDK----AGDKE-------------------------- ------------------------------------------------------------------------ ------------ >ZP_01312235/1-582 ribosomal protein S1 [Desulfuromonas acetoxidans DSM 684]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---MSENNETVNTEELDMMDD-EFEE---------------EFDEEF--GEE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------DLF---ENS--LQ-- ---------------------------G----N--------------------------------------- --------------------------------------------LA-V----------------G--DVVEG TIVQV-N--PDS--VVV-DV--G-Y----------------KSEGV-IPLAEF---AVDGQPAT--L-EVGD KVDVLFE-RAE--------NES----GLIG----LSKEKA-------DRQKVWNALE----EGA---VVEGR IVS--RIKG-GLS-VDI--GVNAFLPGSQVDLRPV---RNLDKLIGETFEFKIIKLN-----KRRG-NIVLS RRVLLETERESQRSDTLKTLEEGQIVE----GVVKN-LTDYGAFIDL------GGIDGLLHITDMSWGRVSH PSDILAVGDSI-NVKVLKFDREKERVSLGLKQITPD--PWLSV-AEKYPTEARVTGKVVSLTDYGAFIE-LE EGVEGLIHVSEM--SWTKRIKHPNKLLSIGDEVETVVLAMDTENRRI-SLGLKQV-------EPNPWEVIGE KFPAGTIIEGQVKNITDFGIFVG-----VDEGIDGLVHISDLSWTK-RIKHPSELYKKGDLVKAVVLNIDRD NERFSLGVKQLTQDP--WQ-II---PEQYAPGTIIRGKVTS-VTEFGIFLEV---E----EG--VEGLIHVS EI---SKDKV----DSPKDFAKVGDELEAVVLHVDTNEHKIALSIKHLSD-R------KEK-AEVDAFM--- ---------------GAQKKA-TSSLGDLLQG-AFNN----ANDEN-------------------------- ------------------------------------------------------------------------ ------------ >YP_901028/1-579 ribosomal protein S1 [Pelobacter propionicus DSM 2379]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------MVDFKRLDAADNGDFDD---------------P-DSEQ--QSN-EF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELY---KES--LK-- ---------------------------D----K--------------------------------------- --------------------------------------------PE-R----------------D--KIIEG TVVRV-D--QET--VLV-DI--G-L----------------KSEGF-VSASEF---RDANGELT--V-KVGD VIRVMMT-RED--------GKR----GY-I----LSKKKA-------DYQAAWEKIGDAGQEGG---IIEGT VTA--RVNG-GFS-VDIF-GVQAFLPASQVDIRPS---SDSDSYIGLTSKFKVIKLN-----QRRD-NIVLS RRAILDEERAASRDVTLAKLEEGQIVE----GVVKN-VTEYGAFVDL------GGVDGLLHVSDLSWGRVGK PADVLKPGQTV-TAKVLKFDRTKGKISLGVKQTLPD--PWLDV-PSKYPQESRISGRVVSLMEYGAFVE-LE PGVEGLIHVSEM--SWTRRIRRAADVLSVGDEVEAVVLGIDMNNRKI-SLGLKQA-------GENPWMHIAE KYSVGTKIEGQIKNMTDFGMFIG-----IEDGIDGLVHVSDISWTK-RIKHPGDVYAKGDIVQAVVLKVDVE NERLSLGIKQLEPDP--WS-IA---PTTYCPGAKVTGKVTS-LTDFGVFVEL---E----EG--VEGLIHVS EL---SREKV----PTAKTFAEVGDTLEAIVLSCDPKERRISLSIKAMQA-A------VEK-EEFEQYL--- ---------------GSQGKA-TSNLGELLQQ-EMKN----RNNN--------------------------- ------------------------------------------------------------------------ ------------ >ZP_01141826/1-584 Ribosomal protein S1 [Geobacter uraniumreducens Rf4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------MGDDKKTFKKKDMPIRRLHDTDEEMEQEERGEF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELY---QDS--LR-- ---------------------------Q-------------------------------------------- --------------------------------------------PQ-S----------------G--EIVKG VVVQI-E--ADC--VLV-DV--G-Y----------------KSEGC-IRINEF---IDETGELT--V-KIGD EVNVFFE-RGE--------NIR----GHMV----LSKKKA-------DSQVAWEAIAAAGGEGG---VIEGK ITG--KVKG-GLI-VDV--GIEAFLPASQVDIRPG---GNLDRFIGETCKFKVLKMN-----RKRG-NIVLS RRVLLEEERDKARTTTLATLSEGDVVD----GIVKN-IADYGAFVDL------GGVDGLLHVTDMSWGRLNH PSEAVKVGDTI-KVKVLKYDREKGKISLGLKQTMAD--PWLNV-ETKYQIGERVQGRVVSLTDYGAFIA-LE EGVEGLVHISEM--SWTKRVRHPSELLTVGDNVEALILGVDTSNRRI-SLGLKQT-------EVNPWTVIGE RYPVGTKIEGQIKNITDFGVFIG-----IEDGIDGLVHVSDISWTK-RIKHPGELYSKGQTVQAVVLNIDAD NERLSLGIKQLTPDP--WD-EI---PSKFKPGTRIKGKVTS-ITDFGVFMEI---E----EG--IEGLVHIS EL---SQEKL----ASTKDFAAVGDELDAVVLNVDTVEKKIALSIKSLQT-A------IDK-AELASYM--- ---------------GSQGEA-TSNLGALLKE-GLKK----NGDE--------------------------- ------------------------------------------------------------------------ ------------ >YP_383834/1-586 ribosomal protein S1 [Geobacter metallireducens GS-15]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------MSEDKDMKNRNAMTIKRFVDVEEDGEHGGSGEF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---QES--IK-- ------------------------------------------------------------------------ --------------------------------------------QHRV----------------G--EVVTG KVVHI-S--NEF--VLV-DI--G-Y----------------KSEGC-IAIDEF--L-DEDGNLT--V-KVGD EVKALFE-RKE--------NQK----GYAV----LSRRKA-------ERLAVWDVIDEAGGEGG---IIEGK ITG--KVKG-GLT-VDI--GVQAFLPASQVDLRPG---GNLDKYIGTTDRFKVLKLN-----KKRG-NIVLS RRVLMEEERESSRKETLATLAEGQVRE----GVVKN-ITDYGAFVDI------GGVDGLLHVTDMSWGRLGH PSEILKPGDKL-NVKVLKYDQEKGKISLGLKQVTPD--PWVSV-EQKYNQGDRVKGKVVSLTDYGAFIA-LE DGVEGLVHVSEM--SWTRRLRHPSEILTVGDEVETVVLGVDMGNRRI-SLGLKQV-------QVNPWTQLEE KYPVGTKLEGQIKSITDFGVFIG-----IEEGIDGLVHVSDISWTK-RIKHPGEVFTKGQTVQAVVLNIDPE NERLSLGIKQLLLDP--WS-EI---PVKYRPGTRVHGKVTS-VTDFGVFLEI---E----EG--IEGLIHVS EL---SREKV----ASPKEFTNVGDELDAVVLSVDESEKKIALSIKSLQM-A------AEK-AEIESYM--- ---------------QAQGEA-TSNLGELLKV-GFRK----NGDGND------------------------- ------------------------------------------------------------------------ ------------ >NP_953648/1-574 ribosomal protein S1 [Geobacter sulfurreducens PCA]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MTIKRFADAEDEADQGGSGEF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---QES--IR-- ------------------------------------------------------------------------ --------------------------------------------HHHV----------------G--EVVKG KVVHI-S--NDY--VLV-DI--G-Y----------------KSEGS-IPVEEF--L-DEAGNLT--V-QVGD EVKALFE-RKE--------NQK----GYAV----LSKRKA-------DRLSAWDSIDAAGGEGG---IVEGK ITG--KVKG-GLT-VDI--GVQAFLPASQVDLRPG---GNLDKYIGVTDRFKVLKLN-----KKRG-NIVLS RRVLLEEERAGVRTETLANLAEGQTRE----GVVKN-ITDYGAFVDI------GGVDGLLHVTDMSWGRLGH PSEMLKPGDKL-SVKILKYDQEKGKISLGLKQITPD--PWLAV-EQKFQVGDRVSGRVVSMTDYGAFVA-LD EGVEGLVHVSEM--SWTKRLRHPSDLLTVGDEVETVVLGIDTGNRRI-SLGLKQA-------QANPWTQLEE KYPVGTKLEGQIKSITDFGVFIG-----VDEGIDGLVHVSDISWTK-RIKHPGEVYAKGQTVQAVVLNVDAE NERLSLGIKQLTPDP--WS-VI---PATYRPGTRVRGKVTS-VTDFGVFLEI---E----EG--IEGLVHVS EL---SREKV----ASPKDFASVGDELDAVVLSVDDVEKKIALSVKALQA-A------AEK-AELESYM--- ---------------QDRGEA-TSNLGALLRE-GMRK----NGDNND------------------------- ------------------------------------------------------------------------ ------------ >YP_169244/1-556 30S ribosomal protein S1 [Francisella tularensis subsp. tularensis SCHU S4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELF---EQS--LK-- ---------------------------Q--T-E--------------------------------------- --------------------------------------------MR-I----------------G--KIIEA TVVSI-D--KEF--AMI-DA--G-L----------------KSESF-IPVSSL--K-NSNGELE--V-AAGD RINVVLE-ALD--------NSC----GETR----LSRDKA-------KKIELWDRIEKAFENNE---TVLGK ITN--HVRG-GYT-MDVE-GLRAFLPGSLVDTRPI---KDVAHLEDKDIELKVVKID-----TKRN-NIVVS RKAVIEENNSGDRDAMLEKISEGSVLK----GIVKN-ITDFGAFIDL------GGVDGLLHITDISWSRISH PTDVLSIGQEI-DVKVIKFDKEKQRISLGIKQLGED--PWLNI-ANELPVGAKLMGTVTNITDYGCFVK-LK EGIEGLVHTSEM--DWTNKNVNPHKAVSIGQEIEVIVLELDADNHRI-SLGIKQC-------RPNPWSEFEK NYKPGDKVTGKIRSITEFGVFIG-----LEGGIDGLVHISDVAWDN-PAK-AIKELKKGDEVEAVLVSVNTD LERIALSMKQLSEDP--FK-NF---INIHPKGSLVTGKVTK-VQDNGAVVML---D----EDNNIDGFIRIS EI---SAEHT----KDVRDELSEGQEVEARIINIDAKKRSITLSIKAVDE-D------NTA-AGKSNYK--- ----------------VEQMTPT-TLGDLIKE---QL-----------NKK--------------------- ------------------------------------------------------------------------ ------------ >YP_897823/1-556 30S ribosomal protein S1 [Francisella tularensis subsp. novicida U112]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELF---EQS--LK-- ---------------------------Q--T-E--------------------------------------- --------------------------------------------MR-I----------------G--KIIEA TVVSI-D--KEF--AMI-DA--G-L----------------KSESF-IPVSSL--K-NSNGELE--V-AAGD RINVVLE-ALD--------NSC----GETR----LSRDKA-------KKIELWDRIEKAFENNE---TVLGK ITN--HVRG-GYT-MDVE-GLRAFLPGSLVDTRPI---KDVAHLEDKDIELKVVKID-----TKRN-NIVVS RKAVIEENNSGDRDAMLEKISEGSVLK----GIVKN-ITDFGAFIDL------GGVDGLLHITDISWSRISH PTDVLSIGQEI-DVKVIKFDKEKQRISLGIKQLGED--PWLNI-ANELPVGAKLMGTVTNITDYGCFVK-LK EGIEGLVHTSEM--DWTNKNVNPHKAVSIGQEVEVIVLELDADNHRI-SLGIKQC-------RPNPWSEFEK NYKPGDKVTGKIRSITEFGVFIG-----LEGGIDGLVHISDVAWDN-PAK-AIKELKKGDEVEAVLVSVNTD LERIALSMKQLSEDP--FK-NF---INIHPKGSLVTGKVTK-VQDNGAVVML---D----EDNNIDGFIRIS EI---SAEHT----KDVRDELSEGQEVEARIINIDAKKRSIALSIKAVDE-D------NTA-AGKSNYK--- ----------------VEQMTPT-TLGDLIKE---QL-----------NKK--------------------- ------------------------------------------------------------------------ ------------ >YP_764222/1-574 ribosomal protein S1 [Francisella tularensis subsp. holarctica OSU18]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------MGTCQTCITNHTGNGNQ---------------KM-------SE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELF---EQS--LK-- ---------------------------Q--T-E--------------------------------------- --------------------------------------------MR-I----------------G--KIIEA TVVSI-D--KEF--AMI-DA--G-L----------------KSESF-IPVSSL--K-NSNGELE--V-AAGD RINVVLE-ALD--------NSC----GETR----LSRDKA-------KKIELWDRIEKAFENNE---TVLGK ITN--HVRG-GYT-MDVE-GLRAFLPGSLVDTRPI---KDVAHLEYKDIELKVVKID-----TKRN-NIVVS RKAVIEENNSGDRDAMLEKISEGSVLK----GIVKN-ITDFGAFIDL------GGVDGLLHITDISWSRISH PTDVLSIGQEI-DVKVIKFDKEKQRISLGIKQLGED--PWLNI-ANELPVCAKLMGTVTNITDYGCFVK-LK EGIEGLVHTSEM--DWTNKNVNPHKAVSIGQEVEVIVLELDADNHRI-SLGIKQC-------RPNPWSEFEK NYKPGDKVTGKIRSITEFGVFIG-----LEGGIDGLVHISDVAWDN-PAK-AIKELKKGDEVEAVLVSVNTD LERIALSMKQLSEDP--FK-NF---INIHPKGSLVTGKVTK-VQDNGAVVML---D----EDNNIDGFIRIS EI---SAEHT----KDVRDELSEGQEVEARIINIDAKKRSITLSIKAVDE-D------NTA-AGKSNYK--- ----------------VEQMTPT-TLGDLIKE---QL-----------NKK--------------------- ------------------------------------------------------------------------ ------------ >YP_514522/1-556 30S ribosomal protein S1 [Francisella tularensis subsp. holarctica]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELF---EQS--LK-- ---------------------------Q--T-E--------------------------------------- --------------------------------------------MR-I----------------G--KIIEA TVVSI-D--KEF--AMI-DA--G-L----------------KSESF-IPVSSL--K-NSNGELE--V-AAGD RINVVLE-ALD--------NSC----GETR----LSRDKA-------KKIELWDRIEKAFENNE---TVLGK ITN--HVRG-GYT-MDVE-GLRAFLPGSLVDTRPI---KDVAHLEYKDIELKVVKID-----TKRN-NIVVS RKAVIEENNSGDRDAMLEKISEGSVLK----GIVKN-ITDFGAFIDL------GGVDGLLHITDISWSRISH PTDVLSIGQEI-DVKVIKFDKEKQRISLGIKQLGED--PWLNI-ANELPVCAKLMGTVTNITDYGCFVK-LK EGIEGLVHTSEM--DWTNKNVNPHKAVSIGQEVEVIVLELDADNHRI-SLGIKQC-------RPNPWSEFEK NYKPGDKVTGKIRSITEFGVFIG-----LEGGIDGLVHISDVAWDN-PAK-AIKELKKGDEVEAVLVSVNTD LERIALSMKQLSEDP--FK-NF---INIHPKGSLVTGKVTK-VQDNGAVVML---D----EDNNIDGFIRIS EI---SAEHT----KDVRDELSEGQEVEARIINIDAKKRSITLSIKAVDE-D------NTA-AGKSNYK--- ----------------VEQMTPT-TLGDLIKE---QL-----------NKK--------------------- ------------------------------------------------------------------------ ------------ >NP_819560/1-551 30S ribosomal protein S1 [Coxiella burnetii RSA 493]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-TF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EKS--LT-- ---------------------------E--T-D--------------------------------------- --------------------------------------------LR-P----------------G--ALVKA TVVEV-R--PDR--VIV-NA--G-L----------------KSEGI-IPASEF--R-NE----E--P-HVGD EFFVVIE-ASD--------NGF----GETR----LSREKA-------RRAKAWSELEKAYKAGE---MVKGV IIE--RVKG-GFT-VDLN-SVRAFLPGSLVDVKPV---RDPGYLEDKEIDFKIIKMD-----QRRN-NVVVS RRAVMEAETSAERQARLEELQEGQEIK----GVIKN-ITDYGAFVDL------GGVDGLLHITDMAWGRVKH PSDLLNVGDEV-HVKVLKFDRDKKRVSLGMKQLADD--PWAKI-ERRYPVNSRVFGKVTNITDYGCFVK-LE EGVEGLVHTSEL--DWTNKNIHPSKVVQSGEEVEVMVLEIDEERRRI-SLGIKQC-------KRNPWQEFAE KHEKDEKITGKVRSITDFGMFIG-----LEGDIDGLVHLSDISWTE-SGEEAIRNYKKGDEVQAVILGIDPE RERISLGIKQLEGDP--FM-EF---VESYDKDAVIQAKVKE-VESKQAVLEL---A----DQ--VLGQMRLA DY---TYDRV----KDLTQELNVGDEVAVKIVNVDRKNRLINVSHKAVE--G------RSE-KGTRTVS--- ----------------DVPTK-T-TLGDLLKE---KI-----------QSKDE------------------- ------------------------------------------------------------------------ ------------ >EAX32965/1-551 ribosomal protein S1 [Coxiella burnetii 'MSU Goat Q177']. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-TF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EKS--LT-- ---------------------------E--T-D--------------------------------------- --------------------------------------------LR-P----------------G--ALVKA TVVEV-R--PDR--VIV-NA--G-L----------------KSEGI-IPASEF--R-NE----E--P-QIGD EFFVVIE-ASD--------NGF----GETR----LSREKA-------RRAKAWSELEKAYKAGE---MVKGV IIE--RVKG-GFT-VDLN-SVRAFLPGSLVDVKPV---RDPGYLEDKEIDFKIIKMD-----QRRN-NVVVS RRAVMEAETSAERQARLEELQEGQEIK----GVIKN-ITDYGAFVDL------GGVDGLLHITDMAWGRVKH PSDLLNVGDEV-HVKVLKFDRDKKRVSLGMKQLADD--PWAKI-ERRYPVNSRVFGKVTNITDYGCFVK-LE EGVEGLVHTSEL--DWTNKNIHPSKVVQSGEEVEVMVLEIDEERRRI-SLGIKQC-------KRNPWQEFAE KHEKDEKITGKVRSITDFGMFIG-----LEGDIDGLVHLSDISWTE-SGEEAIRNYKKGDEVQAVILGIDPE RERISLGIKQLEGDP--FM-EF---VESYDKDAVIQAKVKE-VESKQAVLEL---A----DQ--VLGQMRLA DY---TYDRV----KDLTQELNVGDEVAVKIVNVDRKNRLINVSHKAVE--G------RSE-KGTRTVS--- ----------------DVPTK-T-TLGDLLKE---KI-----------QSKDE------------------- ------------------------------------------------------------------------ ------------ >YP_126722/1-558 30S ribosomal protein S1 [Legionella pneumophila str. Lens]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELF---EQS--IA-- ---------------------------G--A-Q--------------------------------------- --------------------------------------------FY-P----------------G--AIITA KVIDI-D--DDF--VTL-NA--G-L----------------KSEGI-VAVEEF--Y-DKNGELE--V-KVGD TVEVALD-SVE--------DGH----GETL----LSREKA-------KRQEAWRKLSKCHENNE---TVTGL ISG--KVKG-GFT-VEIG-SIRAFLPGSLVDVRPV---RDPSYLEGKELEFKVIKMD-----LKRN-NIVVS RRAVVEEESSADRQALLESLHDGQELH----GIVKN-LTDYGAFIDL------GGIDGLLHITDISWKRVKH PSEVLSVGQDV-KVKVLSFDSERNRVSLGMKQLGND--PWVDL-VERYPIGKRLQGKVTNITDYGCFVE-IE EGVEGLVHMSEM--DWTNKNVHPSKVVSLGDVVDVMVLEIDEERRRI-SLGMKQC-------VGNPWQQFAS THNKGEKVKGKIRSITDFGIFIG-----LDGDIDGLVHLSDISWTV-PGEEAVKQFKKGQELEAVILAIDPE RERISLGLKQLEGDS--FA-SF---AETYTKGAIVKGTVTA-VEPKTVTVAL---A----ED--VSGTIRVS EL---SDERV----DDATTIVKVGDEVEAKITNIDRKNRTISLSVKAKDA-Q------DEA-DAIKKYS--- ----------------RTEAAST-TLGDLLKE---KM-----------ASKEGE------------------ ------------------------------------------------------------------------ ------------ >YP_095450/1-579 30S ribosomal protein S1 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------MNWGEGEWNSFFHFFTKEFI---------------NM-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELF---EQS--IA-- ---------------------------G--A-Q--------------------------------------- --------------------------------------------FY-P----------------G--AIITA KVIDI-D--DDF--VTL-NA--G-L----------------KSEGI-VAVEEF--Y-DKNGELE--V-KVGD TVEVALD-SVE--------DGH----GETL----LSREKA-------KRQEAWRKLSKCHENNE---TVTGL ISG--KVKG-GFT-VEIG-SIRAFLPGSLVDVRPV---RDPSYLEGKELEFKVIKMD-----LKRN-NIVVS RRAVVEEESSADRQALLESLHDGQELH----GIVKN-LTDYGAFIDL------GGIDGLLHITDISWKRVKH PSEVLSVGQDV-KVKVLSFDSERNRVSLGMKQLGND--PWVDL-VERYPIGKRLQGKVTNITDYGCFVE-IE EGVEGLVHMSEM--DWTNKNVHPSKVVSLGDVVDVMVLEIDEERRRI-SLGMKQC-------VGNPWQQFAS THNKGEKVKGKIRSITDFGIFIG-----LDGDIDGLVHLSDISWTV-PGEEAVKQFKKGQELEAVILAIDPE RERISLGLKQLEGDS--FA-SF---AETYTKGSIVKGTVTA-VEPKTVTVAL---A----ED--VSGTIRVS EL---SDERV----DDATTIVKVGDEVEAKITNIDRKNRTISLSVKAKDA-Q------DEA-DAIKKYS--- ----------------RTEAAST-TLGDLLKE---KM-----------ASKEGE------------------ ------------------------------------------------------------------------ ------------ >YP_123700/1-558 30S ribosomal protein S1 [Legionella pneumophila str. Paris]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------K-------ELF---EQS--IA-- ---------------------------G--A-Q--------------------------------------- --------------------------------------------FY-P----------------G--AIITA KVIDI-D--DDF--VTL-NA--G-L----------------KSEGI-VAVEEF--Y-DKNGELE--V-KVGD TVEVALD-SVE--------DGH----GETL----LSREKA-------KRQEAWRKLSKCHENNE---TVTGL ISG--KVKG-GFT-VEIG-SIRAFLPGSLVDVRPV---RDPSYLEGKELEFKVIKMD-----LKRN-NIVVS RRAVVEEESSADRQALLESLHDGQELH----GIVKN-LTDYGAFIDL------GGIDGLLHITDISWKRVKH PSEVLSVGQDV-KVKVLSFDSERNRVSLGMKQLGND--PWVDL-VERYPIGKRLQGKVTNITDYGCFVE-IE EGVEGLVHMSEM--DWTNKNVHPSKVVSLGDVVDVMVLEIDEERRRI-SLGMKQC-------VGNPWQQFAS THNKGEKVKGKIRSITDFGIFIG-----LDGDIDGLVHLSDISWTV-PGEEAVKQFKKGQELEAVILAIDPE RERISLGLKQLEGDS--FA-SF---AETYTKGSIVKGTVTA-VEPKTVTVAL---A----ED--VSGTIRVS EL---SDERV----DDATTIVKVGDEVEAKITNIDRKNRTISLSVKAKDA-Q------DEA-DAIKKYS--- ----------------RTEAAST-TLGDLLKE---KM-----------ASKEGE------------------ ------------------------------------------------------------------------ ------------ >YP_314714/1-573 30S ribosomal protein S1 [Thiobacillus denitrificans ATCC 25259]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------MSTATASSAP---------------AS-------ME-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LS-- ---------------------------H--Q-E--------------------------------------- --------------------------------------------MR-Q----------------G--EVITA EIVGI-D--HNF--VTV-NA--G-L----------------KSESL-IPLEEF--K-NDQGEVE--A-KVGD FVSVAIE-SIE--------DGF----GATK----LSRERA-------KKLAAWLDLEAAMNEGR---VVSGM VQG--KVKG-GLT-VLVG-GLRAFLPGSLVDMRPV---KDTTPYEYKEMEFKVIKLD-----RKRN-NVVVS RRAVLEETMGADREALMESLKEGSIVK----GVVKN-ITDYGAFVDL------GGIDGLLHITDMAWRRVKH PTEVVHVGQEL-EAKILRYDTEKNRVSLGLKQLGDD--PWVGI-ARRYPQGTRMFGKVANLTDYGAFVE-IE EGIEGLVHVSEM--DWTNKNVSPSKIVQLGDEVEVMVLDIDEDKRRI-SLGMKQC-------KSNPWEDFAM NHKKGDKVSGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSV-PGEEAVRNFRKGQDVEAVVLGIDLE RERISLGIKQLEGDP--LT-SY---ATGHEKGSIVKGTIKT-VEAKGATVKL---D----SD--MEGYLRAS EV---SRDRV----EDMRSHYKEGDEIEAMIINVDRKNRVINLSIKAKDM-T------EQD-AAMKKF---- AAES----------AAAASGS-T-NLGALLKA---KL-----------DNKNAE------------------ ------------------------------------------------------------------------ ------------ >YP_545036/1-569 ribosomal protein S1 [Methylobacillus flagellatus KT]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------MTNLSTTT---------------SS-------ME-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LA-- ---------------------------R--Q-E--------------------------------------- --------------------------------------------MR-S----------------G--EVITA EVVSI-D--DDF--VIV-NA--G-L----------------KSESV-IPASEF--R-NDRGELE--V-NVGD FVKVCIE-SLE--------DGY----GSTK----LSREKA-------KRLAAWQELEEAMNESR---IIKGM VNG--RVKG-GLT-VMVN-SIRAFLPGSLVDLRPV---KDTTPFENKEWDFKVIKLD-----RKRN-NVVVS RRAVLEETMGADREALLESLKEGAVVK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PSEVLTVGEEV-EAKILKFDQEKNRVSLGIKQLGDD--PWVAL-GRRYPVGTRLFGKVTNLTDYGAFVE-IE PGIEGLVHVSEM--DWTNKNVHPAKIAQLGDEVEVMILEIDEDRRRL-SLGMKQC-------QANPWDDFAA THKKGDKVSGQIKSITDFGVFIG-----LPGGIDGLVHLSDLSWNQ-PGEEAIRNFKKGDELEAVVLSIDVE KERISLGVKQLDSDP--FS-AY---TALNDKGAIVKGTVKS-IEAKGAVIAL---D----NE--VEGYLRAS EV---SRDKV----DDISTVLKEGDEIEARITNIDRKNRSIALSIKAKDI-A------DEA-DALQKF---- --SN----------DAGSAGT-T-NLGALLKA---KL-----------DGKNNE------------------ ------------------------------------------------------------------------ ------------ >YP_412755/1-571 ribosomal protein S1 [Nitrosospira multiformis ATCC 25196]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------MATVSPAV---------------DS-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LS-- ---------------------------R--Q-E--------------------------------------- --------------------------------------------MR-I----------------G--EVITA QVVRV-D--YNI--VVV-NA--G-L----------------KSESF-IPVDEF--K-NDKGEVE--A-KPGD FVSVAIE-ALE--------DGY----GETR----LSRDKA-------KRLTAWHDLEAAMESGA---IVSGV VSG--KVKG-GLT-AMIN-GIRAFLPGSLVDIRPV---KDTTPYENKEMEFKVIKLD-----RKRN-NVVVS RRAVLEETQGADRQTLLANLTEGAIVK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PSEVISVGDEV-TAKVLKFDQEKNRVSLGMKQLTED--PWVGL-SRRYPPHTRLFGKVSNLTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVYPSKVVQLGDEVEVMILEIDEERRRI-SLGMKQC-------KVNPWEDFAM NHQKGDKVRGQIKSITDFGVFIG-----LQGGIDGLVHLSDLSWNQ-PGEEAVRNYKKGDEVEAVVLSIDVE RERISLGIKQLEGDP--FN-SF---VSVHDKNSIVKGTVKS-IDAKGAVISL---E----ND--VEGYLRAS EV---SRDRV----EDIRSHLKEGDVVEAMIINVDRKNRGINLSIKAKDM-A------EES-DAMQKV---- AG-D----------ASASAGT-T-SLGALLKA---KM-----------DVK-NTEQ---------------- ------------------------------------------------------------------------ ------------ >NP_841979/1-572 30S ribosomal protein S1 [Nitrosomonas europaea ATCC 19718]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------MTIATSVA---------------GS-------SE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---NES--LS-- ---------------------------H--K-E--------------------------------------- --------------------------------------------MR-V----------------G--EVITA EIIRV-D--YNF--VVV-NA--G-L----------------KSESY-IPIEEF--K-NDRGEIE--A-REGD FVSVAIE-ALE--------NGF----GETR----LSRDKA-------KRLNAWYELEEAMEKGK---IVTGM VNG--KVKG-GLT-ATIN-GIRAFLPGSLVDIRPV---KDMTPYENKEMEFKVIKLD-----RKRN-NVVVS RRAVLEETQGADRDELLASLQDGAVVQ----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PTEVINVGDEV-TAKVLKFDQEKNRVSLGLKQLTED--PWIGL-SRRYPQGTRIFGKVTNMTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVYPSKIVQLGDEVEVMILEIDEDRRRI-SLGMKQC-------RPNPWEEFSL SHEKGDKVTGQIKSITDFGLFIG-----LPGNIDGLVHLSDLSWNQ-PGEKAISEFKKGDEVEAVVLSIDVE KERISLGIKQLEGDP--FN-IY---VASHDKNSIVKGTVKS-VDAKGAVIAL---T----DE--VEGYLRAS EF---SRDKI----EDIRSRVNEGDEIEAMIINIDRKNRSISLSVKARIQ-D------EED-KAVKSL---- ASVS----------NPASAGT-T-NLGALLKA---KI-----------DSK-SSEE---------------- ------------------------------------------------------------------------ ------------ >YP_746643/1-570 ribosomal protein S1 [Nitrosomonas eutropha C91]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------MTIATSVA---------------DS-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---NES--LS-- ---------------------------H--K-E--------------------------------------- --------------------------------------------MR-V----------------G--EVITA EIIRV-D--YNF--VVV-NA--G-L----------------KSESY-IPIEEF--K-NDRGEVE--A-HEGD FVSVAIE-ALE--------NGY----GESR----LSRDKA-------KRLNAWYELEDAMEKGT---IVTGM VNG--KVKG-GLT-ATIN-GIRAFLPGSLVDIRPV---KDMTPYENKEMEFKVIKLD-----RKRN-NVVVS RRAVLEETQGADRDELLASLQEGAVVQ----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PTEVINVGDEV-SAKILKFDQEKNRVSLGLKQLTED--PWIGL-SRRYPQGTRMFGKVTNMTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVYPSKIVQLGDEVEVMILEIDEDRRRI-SLGMKQC-------KPNPWEEFSL SHEKGNKVTGQIKSITDFGLFIG-----LPGNIDGLVHLSDLSWIQ-TGEKAISEFRKGDEVEAVVLSIDVE KERISLGIKQLEGDP--FN-IY---VASHDKGSLVKGTVKS-VDAKGAVIAL---T----DD--VEGYLRAS EF---SRDKI----EDIRTRVNEGDELEAAIINIDRKSRSISLSVKARIQ-E------EED-KAIRSL---- A--P----------SPASAGT-T-NLGALLKA---KI-----------DSK-SSEE---------------- ------------------------------------------------------------------------ ------------ >NP_902716/1-563 30S ribosomal protein S1 [Chromobacterium violaceum ATCC 12472]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------MTT---------------LS-------ME-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------QLF---EES--LT-- ---------------------------L--H-D--------------------------------------- --------------------------------------------MR-V----------------G--EVITA EVVAV-D--SNF--VTV-NA--G-L----------------KSESL-IPAEEF--K-NDQGVVE--V-AIGD FVTVAID-ALE--------NGF----GETK----LSREKA-------KRMAAWVELEEALEAGT---ILSGM ISG--KVKG-GLT-VMVN-GIRAFLPGSLVDVRPV---KDTTPYENKQIEFKVIKLD-----RKRN-NVVVS RRSVLEETLGEERKALLETLKEGAVIK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PSEVLAVGDEV-EAKVLKFDQEKNRVSLGLKQLGED--PWVGL-SRRYPSGTRLFGKVTNLTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVHPSKVVQVGDEVEVMILEIDEDRRRI-SLGMKQC-------LANPWNEFAD NFHKGDKLKGAIKSITDFGVFVG-----LPGGIDGLVHLSDLSWNE-AGEEAVRKFKKGDEVEAVVLSIDVE KERISLGIKQLEGDP--FN-NF---VAMNDKGALVKGTVKS-VDAKGAVIAL---D----AD--VEGYLRAS EL---SRDRV----EDARSVLKDGDAVEAVIVAVDRKSRNISLSIKAKDA-Q------EDN-AALKSL---- --AV----------DSASAGT-T-NLGALLKA---KL-----------SGS-NE------------------ ------------------------------------------------------------------------ ------------ >YP_975258/1-570 30S ribosomal protein S1 [Neisseria meningitidis FAM18]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MAVYRKELY---------------MS-------ME-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------QLL---EES--FT-- ---------------------------L--Q-E--------------------------------------- --------------------------------------------MN-P----------------G--EVITA EVVAI-D--QNF--VTV-NA--G-L----------------KSESL-IDVAEF--K-NAQGEIE--V-KVGD FVTVTIE-SVE--------NGF----GETK----LSREKA-------KRAADWIALEEAMENGD---ILSGI ING--KVKG-GLT-VMIS-SIRAFLPGSLVDVRPV---KDTSHFEGKEIEFKVIKLD-----KKRN-NVVVS RRAVLEATLGEERKALLENLQEGSVIK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PSEVLEVGQEV-EAKVLKFDQEKQRVSLGMKQLGED--PWSGL-TRRYPQGTRLFGKVSNLTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVHPSKVVQLGDEVEVMILEIDEGRRRI-SLGMKQC-------QANPWEEFAA NHNKGDKISGAVKSITDFGVFVG-----LPGGIDGLVHLSDLSWTE-SGEEAVRKYKKGEEVEAVVLAIDVE KERISLGIKQLEGDP--FG-NF---ISVNDKGSLVKGSVKS-VDAKGAVIAL---S----DE--VEGYLPAS EF---AADRV----EDLTTKLKEGDEVEAVIVTVDRKNRSIKLSVKAKDA-K------ESR-EALNSV---- -NAT----------ANANAGT-T-SLGDLLKA---KL-----------SGE-QE------------------ ------------------------------------------------------------------------ ------------ >NP_284231/1-561 30S ribosomal protein S1 [Neisseria meningitidis Z2491]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MS-------ME-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------QLL---EES--FT-- ---------------------------L--Q-E--------------------------------------- --------------------------------------------MN-P----------------G--EVITA EVVAI-D--QNF--VTV-NA--G-L----------------KSESL-IDVAEF--K-NAQGEIE--V-KVGD FVTVTIE-SVE--------NGF----GETK----LSREKA-------KRAADWIALEEAMENGN---ILSGI ING--KVKG-GLT-VMIS-SIRAFLPGSLVDVRPV---KDTSHFEGKEIEFKVIKLD-----KKRN-NVVVS RRAVLEATLGEERKALLENLQEGSVIK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PSEVLEVGQEV-EAKVLKFDQEKQRVSLGMKQLGED--PWSGL-TRRYPQDTRLFGKVSNLTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVHPSKVVQLGDEVEVMILEIDEGRRRI-SLGMKQC-------QANPWEEFAA NHNKGDKISGAVKSITDFGVFVG-----LPGGIDGLVHLSDLSWTE-SGEEAVRKYKKGEEVEAVVLAIDVE KERISLGIKQLEGDP--FG-NF---ISVNDKGSLVKGSVKS-VDAKGAVIAL---S----DE--VEGYLPAS EF---AADRV----EDLTTKLKEGDEVEAVIVTVDRKNRSIKLSVKAKDA-K------ESR-EALNSV---- -NAA----------ANANAGT-T-SLGDLLKA---KL-----------SGE-QE------------------ ------------------------------------------------------------------------ ------------ >YP_207744/1-561 30S ribosomal protein S1 [Neisseria gonorrhoeae FA 1090]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MS-------ME-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------QLL---EES--FT-- ---------------------------L--Q-E--------------------------------------- --------------------------------------------MN-P----------------G--EVITA EVVAI-D--QNF--VTV-NA--G-L----------------KSESL-IDVAEF--K-NAQGEIE--V-KVGD FVTVTIE-SVE--------NGF----GETK----LSREKA-------KRAADWIALEEAMENGN---ILSGI ING--KVKG-GLT-VMIS-SIRAFLPGSLVDVRPV---KDTSHFEGKEIEFKVIKLD-----KKRN-NVVVS RRAVLEATLGEERKALLENLQEGSVIK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PSEVLEVGQEV-EAKVLKFDQEKQRVSLGMKQLGED--PWSGL-TRRYPQATRLFGKVSNLTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVHPSKVVQLGDEVEVMILEIDEGRRRI-SLGMKQC-------QANPWEEFAA NHNKGDKISGAVKSITDFGVFVG-----LPGGIDGLVHLSDLSWTE-SGEEAVRKYKKGEEVEAVVLAIDVE KERISLGIKQLEGDP--FG-NF---ISVNDKGSLVKGSVKS-VDAKGAVIAL---S----DE--VEGYLPAS EF---AADRV----EDLTTKLKEGDEVEAVIVTVDRKNRSIKLSVKAKDA-K------ESR-EALNSV---- -NAA----------ANANAGT-T-SLGDLLKA---KL-----------SGE-QE------------------ ------------------------------------------------------------------------ ------------ >NP_274320/1-561 30S ribosomal protein S1 [Neisseria meningitidis MC58]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MS-------ME-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------QLL---EES--FT-- ---------------------------L--Q-E--------------------------------------- --------------------------------------------MN-P----------------G--EVITA EVVAI-D--QNF--VTV-NA--G-L----------------KSESL-IDVAEF--K-NAQGEIE--V-KVGD FVTVTIE-SVE--------NGF----GETK----LSREKA-------KRAADWIALEEAMENGD---ILSGI ING--KVKG-GLT-VMIS-SIRAFLPGSLVDVRPV---KDTSHFEGKEIEFKVIKLD-----KKRN-NVVVS RRAVLEATLGEERKALLENLQEGSVIK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVKH PSEVLEVGQEV-EAKVLKFDQEKQRVSLGMKQLGED--PWSGL-TRRYPQGTRLFGKVSNLTDYGAFVE-IE QGIEGLVHVSEM--DWTNKNVHPSKVVQLGDEVEVMILEIDEGRRRI-SLGMKQC-------QANPWEEFAA NHNKGDKISGAVKSITDFGVFVG-----LPGGIDGLVHLSDLSWTE-SGEEAVRKYKKGEEVEAVVLAIDVE KERISLGIKQLEGDP--FG-NF---ISVNDKGSLVKGSVKS-VDAKGAVIAL---S----DE--VEGYLPAS EF---AADRV----EDLTTKLKEGDEVEAVIVTVDRKNRSIKLSVKAKDA-K------ESR-EALNSV---- -NAA----------ANANAGT-T-SLGDLLKA---KL-----------SGE-QE------------------ ------------------------------------------------------------------------ ------------ >ZP_00245186/1-560 COG0539: Ribosomal protein S1 [Rubrivivax gelatinosus PM1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LK-- ---------------------------R--S-D--------------------------------------- --------------------------------------------MR-A----------------G--EVITA EVVRI-E--HSF--VVV-NA--G-L----------------KSEAY-VAIEEF--K-NDQGELE--V-QVGD FVSVAID-AIE--------NGY----GDTI----LSRDKA-------KRLASWMSLETSLESGD---FVTGT VNG--KVKG-GLT-VLVN-GIRAFLPGSLLDTRPV---KDMTPFEGKTMEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLLGTLREGAFVN----GVVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVTVGQEL-TAKVLKFDAEKNRVSLGLKQMGDD--PWVGV-SRRYPTGTRLFGKITNIADYGAFVE-IE PGIEGLVHVSEM--DWTNKNIAPSKLVTLGEEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWDEFAQ NHKRGDKLKGPVKSITDFGVFVG-----LAAGIDGLVHLSDLSWHE-PGEAAVRNYKKGQEVEALVLAIDVE RERISLGIKQLDGDP--FA-TF---TTLNDRGATVTGKVKT-VDARGAEIQL---T----DD--VTGYLRAS EI---SRDRV----EDARNVLKEGDEVTALIINVDRKTRSIQLSIKAKDN-V------DNQ-EAMQRL---- AQTS----------ERENAGT-T-SLGALLKA---KL-----------DQN-NS------------------ ------------------------------------------------------------------------ ------------ >YP_548623/1-561 ribosomal protein S1 [Polaromonas sp. JS666]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---NES--LQ-- ---------------------------R--S-E--------------------------------------- --------------------------------------------MR-T----------------G--EVITA EVVRI-D--HNH--VVV-NA--G-L----------------KSEAY-VPLEEF--K-NDQGELE--V-QVGD FVSVAID-SVE--------NGY----GDTL----LSRDKA-------KRLASWMSLEKALESGE---FVTGQ TSG--KVKG-GLT-VLVN-GIRAFLPGSLIDTRPI---KDLSPYENKTMEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLMETLKEGTAVK----GIVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVTAGQEI-VAKILKFDTEKNRVSLGLKQMGDD--PWMGV-NRRYPQGTRLFGKITNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNVAPSKLVALGDEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAQ DTKRGDRVKGPIKSITDFGVFVG-----LAAGIDGLVHLSDLSWNE-PGEAAVRNYKKGQEVEAIVLAVDVD RERISLGIKQLDSDP--FT-TF---VSINDKGAIVTGKVKT-VDAKGAEIDL---G----ED--IIGYLRAS EI---SRDRV----EDARNVLKEGDEVSAVVVNVDRKTRNIQLSVKAKDN-A------DQQ-EAMANL---- SQQS----------SRENAGL-T-NLGALLRA---KL-----------DNN-EK------------------ ------------------------------------------------------------------------ ------------ >YP_983019/1-561 ribosomal protein S1 [Polaromonas naphthalenivorans CJ2]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---NES--LE-- ---------------------------R--S-E--------------------------------------- --------------------------------------------MR-S----------------G--EVITA EVVRI-D--HNH--VVV-NA--G-L----------------KSEAY-IPLEEF--K-NDQGEVE--V-QVGD FVSVAID-SVE--------NGY----GDTL----LSRDKA-------KRLASWMSLEKALESGE---FVTGQ TSG--KVKG-GLT-VLVN-GIRAFLPGSLIDTRPI---KDLSPYENKTMEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLMETLKEGSAVK----GIVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVTAGQEI-VAKILKFDTEKNRVSLGLKQMGDD--PWMGV-NRRYPQSTRLFGKITNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNVAPSKLVALGDEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAV ETKRGDRVKGPIKSITDFGVFVG-----LAAGIDGLVHLSDLSWNE-PGEAAVRNYKKGQEVEAIVLAVDVD RERISLGIKQLDSDP--FT-TF---VSINDKGAIVTGKVKT-VDAKGAEIDL---G----ED--IIGYLRAS EI---SRDRV----EDARNVLKEGDEVSAVVVNVDRKTRNIQLSVKAKDN-A------DQQ-EAMASL---- SQQS----------SRESAGL-T-SLGALLRA---KL-----------DNS-DK------------------ ------------------------------------------------------------------------ ------------ >YP_522829/1-566 ribosomal protein S1 [Rhodoferax ferrireducens T118]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------MPHP---------------KM-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LQ-- ---------------------------R--T-E--------------------------------------- --------------------------------------------MR-P----------------G--EVITA EVVRI-E--HSF--VVV-NA--G-L----------------KSEAY-VPLEEF--K-NDKGEIE--V-QVGD FVSVAIG-SIE--------NGY----GDTI----LSRDTA-------KRLASWMSLEKALETGE---FVTGT TSG--KVKG-GLT-VLVN-GIRAFLPGSLVDTRPT---KDLSPYENKTLEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLMNTLKEGAIVQ----GVVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVTAGQEI-TAKILKFDTEKNRVSLGLKQLGDD--PWMGV-NRRYPQGTRMFGKITNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNIAPAKIVALGDEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAQ NTKRGDRVKGPIKSITDFGVFVG-----LAAGIDGLVHLSDLSWNE-TGEAAVREYKKGQEVEALVLAVDVD RERISLGIKQLDSDP--FT-TF---ATINDKGQVVTGKVKT-VDAKGAEIDL---G----DD--IIGYLRAS EI---SRDRV----EDARNVLKEGDEVTAVVVNVDRKTRNIQLSIKAKDA-A------DQN-EAMATL---- SQSS----------ARENAGT-T-SLGALLRA---KL-----------DNT-EK------------------ ------------------------------------------------------------------------ ------------ >ZP_01577999/1-561 ribosomal protein S1 [Delftia acidovorans SPH-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------SLF---EES--LQ-- ---------------------------R--T-E--------------------------------------- --------------------------------------------MR-P----------------G--EVITA EVVRV-E--HNF--VVV-NA--G-L----------------KSEAY-VPIDEF--K-NDQGEIE--V-QVGD FVSVAIG-SIE--------NGY----GDTI----LSRDTA-------KRLASWLALEKALESGE---FVTGT TSG--KVKG-GLT-VLVN-GIRAFLPGSLIDTRPI---KDLTPYENKTMEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLMETLKEGAIVQ----GVVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVQAGQEI-TAKILKFDTEKNRVSLGLKQMGDD--PWMGV-SRRYPSSTRLFGKVTNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNIAPTKLVTLGDEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAQ NTKRGDRVKGPIKSITDFGVFVG-----LAAGIDGLVHLSDLSWNE-PGEAAVRNYKKGQEVEAIVLAVDVE RERISLGIKQLDSDP--FT-TF---VTVNDKGQIVSGKVKT-VDARGAEIDL---G----ED--IIGYLRAS EI---AVDRV----EDARSVLKEGDEITAVVVNVDRKTRNIQLSIKAKDQ-V------DQQ-EAMASL---- SAQS----------AKENAGT-T-SLGALLRA---KL-----------DNS-DK------------------ ------------------------------------------------------------------------ ------------ >ZP_01521593/1-560 ribosomal protein S1 [Comamonas testosteroni KF-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--T-E--------------------------------------- --------------------------------------------MR-P----------------G--EVITA EVVRV-E--HNF--VVV-NA--G-L----------------KSEAY-VPLDEF--K-NDQGEVE--V-QVGD FVSVAIG-SIE--------NGY----GDTI----LSRDTA-------KRLASWLSLEKALESGE---FVTGT TSG--KVKG-GLT-VLVN-GIRAFLPGSLIDTRPI---KDLTPYENKTLEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLMETLKEGAIVQ----GVVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVTAGQEI-TAKILKFDTEKNRVSLGLKQMGDD--PWMGV-ARRYPSATRLFGKVTNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNIAPTKLVSLGDEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAQ NTKRGDRVKGPIKSITDFGVFVG-----LAAGIDGLVHLSDLSWNE-AGEAAVRNYKKGQEVEAIVLAVDVE RERISLGIKQLDSDP--FT-TF---VTVNDKGQVVTGKVKT-VDAKGAEIDL---G----ED--IIGYLRAS EI---SQDRV----EDARSVLKEGDEVTAVVVNVDRKSRNIQLSIKQKDH-A------EQQ-VAMASL---- SAQS----------SKENAGT-T-SLGALLRA---KL-----------D-A-DK------------------ ------------------------------------------------------------------------ ------------ >YP_997873/1-562 ribosomal protein S1 [Verminephrobacter eiseniae EF01-2]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LQ-- ---------------------------R--T-E--------------------------------------- --------------------------------------------MR-P----------------G--EVITA EVMRV-E--HNF--VVV-NA--G-L----------------KSEAY-VPLDEF--K-NDKGEVE--V-QVGD FVSVAIG-SIE--------NGY----GDTI----LSRDTA-------KRLASWMSLEKALESGE---FVTGT TSG--KVKG-GLT-VLVN-GIRAFLPGSLIDTRPI---KDLTPYENKTMEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLMETLKEGSIVQ----GVVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVTAGQDI-TAKILKFDTEKNRVSLGLKQMGDD--PWLGV-SRRYPQGTRLFGKVTNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNIAPAKLVTLGDEAEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAQ NTKRGDRVKGPVKSITDFGVFVG-----LAAGIDGLVHLSDLSWSE-PGEAAVRNYKKGQEVQAIVLAVDVD RERISLGIKQLDGDP--FT-TF---VTVNDKGQTVTGKVKT-VDARGAEIEI---G----QD--IIGYLRAS EI---SRDRV----EDARNVLKEGDEVTAVVVNIDRKTRNIQLSIKQKDM-V------DQQ-EAMQNL---- SQQS----------SRESAGT-T-SLGALLRA---KL-----------DNNQDK------------------ ------------------------------------------------------------------------ ------------ >YP_971619/1-561 ribosomal protein S1 [Acidovorax avenae subsp. citrulli AAC00-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LQ-- ---------------------------R--T-E--------------------------------------- --------------------------------------------MR-P----------------G--EVITA EVVRV-E--HNF--VVV-NA--G-L----------------KSEAY-VPLEEF--K-NDKGEVE--V-QVGD FVSVAIG-SIE--------NGY----GDTI----LSRDTA-------KRLASWLALEKALESGE---FVTGT TSG--KVKG-GLT-VLVN-GIRAFLPGSLIDTRPI---KDLTPYENKTMEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEERAKLMETLKEGSIVQ----GVVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVQAGQEI-TAKILKFDTEKNRVSLGLKQMGDD--PWLGV-SRRYPSGTRLFGKVTNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNIAPSKLVSLGDEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAQ NTKRGDRVKGPIKSITDFGVFVG-----LAAGIDGLVHLSDLSWNE-PGEAAVRNYKKGQEVEAIVLAVDVD RERISLGIKQLDGDP--FT-TF---VTVNDKGQTVTGKVKT-VDARGAEIDL---G----ED--IVGYLRAS EI---SRDRV----EDARNVLKEGDEVTAVVVNVDRKTRNIQLSIKAKDM-A------DEQ-GAMASL---- SQQS----------ARESAGT-T-SLGALLRA---KL-----------DNS-DK------------------ ------------------------------------------------------------------------ ------------ >YP_986706/1-561 ribosomal protein S1 [Acidovorax sp. JS42]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--T-E--------------------------------------- --------------------------------------------MR-P----------------G--EVITA EVVRV-E--HNF--VVV-NA--G-L----------------KSEAY-VPIDEF--K-NDQGEIE--V-QVGD FVSVAIG-SIE--------NGY----GDTI----LSRDTA-------KRLASWLSLEKALESGE---FVTGT TSG--KVKG-GLT-VLVN-GIRAFLPGSLIDTRPV---KDLTPYENKTLEFKVIKLD-----RKRN-NVVLS RRAVVEASMGEDRAKLMETLKEGAIVN----GVVKN-ITEYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVVTAGQEI-TAKILKFDTEKNRVSLGLKQMGDD--PWLGV-SRRYPSGTRLFGKVTNIADYGAFVE-LE PGIEGLVHVSEM--DWTNKNVAPSKLVSLGDEVEVMVLEIDEDKRRI-SLGMKQC-------KANPWQEFAQ DTKRGDRVKGPIKSITDFGVFVG-----LAAGIDGLVHLSDLSWNE-PGESAVRNYKKGQEVEAIVLAVDVD RERISLGIKQLDGDP--FT-TF---VTVNDKGQTVTGKVKT-VDARGAEIDL---G----ED--IVGYLRAS EI---SRDRV----EDARNVLKEGDEVTAVVVNVDRKTRNIQLSIKQKDM-V------DQQ-EAMAHL---- SAQS----------AKENAGT-T-SLGALLRA---KL-----------DNS-DK------------------ ------------------------------------------------------------------------ ------------ >YP_284502/1-559 30S ribosomal protein S1 [Dechloromonas aromatica RCB]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------QLF---EES--LA-- ---------------------------R--Q-E--------------------------------------- --------------------------------------------MR-Q----------------G--EVITA EVVLI-D--HNF--VVV-NA--G-L----------------KSESY-VPLEEF--L-NDQGELE--V-KVGD FVQVAIE-MLE--------DGY----GATR----LSRDRA-------KRIAAWNFLEEALNNNS---LVTGT ITG--KVKG-GLT-VMSN-GVRAFLPGSLVDMRPV---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVMS RRAVLEATADKDREKLLENLKEGTTVK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLNVGDEV-TAKILKFDAEKNRVSLGMKQLGDD--PWVGI-ARRYPAGTRLFGKVTNLTDYGSFVE-IE QGIEGLVHVSEM--DWTNKNVHPSKVVQLGDEVEVMILEIDEERRRI-SLGMKQC-------QANPWDDFAM NHKKGDKVKGAIKSITDFGIFIG-----LPGGIDGLVHLSDLSWSA-TGEEAIRNFKKGDEVEAVVLGIDVE KERISLGIKQLEGDP--YT-NF---IATHEKNSIVNCTVKS-VDARGAVLTL---D----GE--NEGYLRAS EF---SRDRI----DDLSQHLKVGDTVEAMIINVDRKTRGINLSIKAKDN-A------EQH-EAMQKL---- SAES----------SAAASGT-T-NLGALLKA---KL-----------NQQ-G------------------- ------------------------------------------------------------------------ ------------ >YP_932576/1-568 30S ribosomal protein S1 [Azoarcus sp. BH72]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------MSTATPVS---------------T--------QE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LA-- ---------------------------L--Q-E--------------------------------------- --------------------------------------------MR-A----------------G--EVITA EVVRI-D--QNF--VVV-NA--G-L----------------KSESY-VPIDEF--R-NDRGELE--V-NPGD FIHVAIE-ALE--------DGY----GETR----LSRDKA-------KRIAAWNDLEKALNEGT---LVKGV ISG--RVKG-GLT-VMTN-SIRAFLPGSLVDMRPV---KDTSPYEGKEYEFKVIKLD-----RKRN-NVVVS RRAVLEESMGEERQKLLENLKEGTVVK----GVVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLNVGDEI-EAKVLKFDQEKNRVSLGLKQLGED--PWVGI-SRRYPQGTRLFGKVTNITDYGAFVE-VE QGIEGLVHVSEM--DWTNKNIHPTKVVQLGDEVEVMILEIDEDRRRI-SLGMKQC-------ASNPWDDFAI NHKKGDKVRGQIKSITDFGVFIG-----LDGGIDGLVHLSDLSWSE-SGEDAVRKFKKGDEVEAVVLAIDVE RERISLGIKQLEGDP--FT-NF---IATHEKNSLVRGTVKS-VDARGAVIGL---G----DE--VEGYLRAS EA---APHRV----DDLTTMLKEGDELELMIINVDRKTRSINLSIRAKDQ-A------EQT-EAMQKL---- ASES----------S-AASGT-T-NLGALLKA---KL-----------NEQ-KQ------------------ ------------------------------------------------------------------------ ------------ >YP_157511/1-591 30S ribosomal protein S1 [Azoarcus sp. EbN1]. ------------------------------------------------------------------------ --------------------------------------------------------------------MFSD FQSSTGSRFRAAFGPSLFMTTATPVS---------------DF-------QE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---EES--LA-- ---------------------------R--Q-E--------------------------------------- --------------------------------------------MR-S----------------G--EVITA EVVSI-D--HNF--VVV-NA--G-L----------------KSESY-VPIEEF--R-DDRGELE--V-QVGD FVHVAID-ALE--------DGY----GETR----LSREKA-------KRIAAWNDLEKALNEGS---LVKGL ISG--RVKG-GLT-VMTN-SIRAFLPGSLVDMRPV---KDTSPYEGKEFEFKVIKLD-----RKRN-NVVVS RRAVLEETMGEEREKLLANLKEGTVIK----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLNVGDEI-DAKVLKFDQEKNRVSLGLKQLGED--PWVGI-SRRYPQGTRLFGKVTNITDYGAFVE-VE QGIEGLVHVSEM--DWTNKNIHPTKVVQLGDEVEVMILEIDEDRRRI-SLGMKQC-------MSNPWDDFAI NHKKGDKVRGQIKSITDFGVFIG-----LDGGIDGLVHLSDLSWSD-TGEEAVRRFKKGDEVEAVVLAIDVE RERISLGVKQLEGDP--FT-NF---IATHEKNSIVGGTVKS-VEARGAVIAL---N----ED--VEGYLRAS EA---AAHRV----DDLTTVLKEGQEVEVMIINVDRKTRSINLSIRAKDQ-A------EQS-DAMQKF---- ASDS----------S-AASGT-T-NLGALLKA---KL-----------NEQ-KQ------------------ ------------------------------------------------------------------------ ------------ >CAJ48963/1-570 30S ribosomal protein S1 [Bordetella avium 197N]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MSSVSTSA----------------FG-------GE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---AES--LK-- ---------------------------S--Q-D--------------------------------------- --------------------------------------------MK-S----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAL-IPLEEF--L-NDQGELE--V-QPGD FVSVAID-SLE--------NGY----GDTI----LSRDRA-------KRLSAWLQLEKALENGE---LVTGT ITG--KVKG-GLT-VMTN-GIRAFLPGSLVDLRPV---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRQVLEASMGEERQKLLETLHEGAVVK----GVVKN-ITDYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVLQVGQEV-EAKVLKFDQEKSRVSLGVKQLGED--PWVGL-ARRYPQGTRLFGKVTNLTDYGAFVE-VE AGIEGLVHVSEM--DWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRI-SLGMKQC-------RQNPWEEFAT NFKRGDKVRGAIKSITDFGVFVG-----LPGGIDGLVHLSDLSWTE-TGEEAVRNFKKGDEIEAVVLGIDTE KERISLGIKQLEGDP--FN-NF---VATYDKGAVVPGTIKQ-VEAKGAVVTL---S----VD--VEGYLRAS EI---SSGRV----EDATTVLNVGDNVEAMIINIDRKARSIQLSIKARDN-A------ETA-ETIQRM---- SEAS----------ASS--GT-T-NLGALLKA---KL-----------DQQ-RNDG---------------- ------------------------------------------------------------------------ ------------ >NP_885303/1-576 30S ribosomal protein S1 [Bordetella parapertussis 12822]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------MDSNLMSSVSTSAI---------------VG-------GE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---AES--LK-- ---------------------------S--Q-D--------------------------------------- --------------------------------------------MK-S----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAL-IPLEEF--L-NDQGELE--V-QPGD FVSVAID-SLE--------NGY----GDTI----LSRDRA-------KRLSAWLQLEQALENGE---LVTGT ITG--KVKG-GLT-VMTN-GIRAFLPGSLVDLRPV---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRQVLEASMGEERQKLLETLHEGAVVK----GVVKN-ITDYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVLQVGQEV-EAKVLKFDQEKSRVSLGVKQLGED--PWVGL-ARRYPQGTRLFGKVTNLTDYGAFVE-VE AGIEGLVHVSEM--DWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRI-SLGMKQC-------RQNPWEEFAT NFKRGDKVRGAIKSITDFGVFVG-----LPGGIDGLVHLSDLSWTE-SGEEAVRNFKKGDELEAVVLGIDTD KERISLGIKQLEGDP--FN-NF---VATHDKGAVVPGTIKS-VEPKGAVITL---S----VD--VEGYLRAS EI---SSGRV----EDATTVLKAGENIEAMIVNIDRKARSIQLSIKARDN-A------ETA-ETIQRM---- SEAS----------ASS--GT-T-NLGALLKA---KL-----------DQQ-RNDG---------------- ------------------------------------------------------------------------ ------------ >NP_879751/1-576 30S ribosomal protein S1 [Bordetella pertussis Tohama I]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------MDSNLMSSVSTSAI---------------LG-------GE-NF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---AES--LK-- ---------------------------S--Q-D--------------------------------------- --------------------------------------------MK-S----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAL-IPLEEF--L-NDQGELE--V-QPGD FVSVAID-SLE--------NGY----GDTI----LSRDRA-------KRLSAWLQLEQALENGE---LVTGT ITG--KVKG-GLT-VMTN-GIRAFLPGSLVDLRPV---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRQVLEASMGEERQKLLETLHEGAVVK----GVVKN-ITDYGAFVDL------GGIDGLLHITDMAWRRVRH PSEVLQVGQEV-EAKVLKFDQEKSRVSLGVKQLGED--PWVGL-ARRYPQGTRLFGKVTNLTDYGAFVE-VE AGIEGLVHVSEM--DWTNKNVDPRKVVTLGEEVEVMVLEIDEDRRRI-SLGMKQC-------RQNPWEEFAT NFKRGDKVRGAIKSITDFGVFVG-----LPGGIDGLVHLSDLSWTE-SGEEAVRNFKKGDELEAVVLGIDTE KERISLGIKQLEGDP--FN-NF---VATHDKGAVVPGTIKS-VEPKGAVITL---S----VD--VEGYLRAS EI---SSGRV----EDATTVLKAGENIEAMIVNIDRKARSIQLSIKARDN-A------ETA-ETIQRM---- SEAS----------ASS--GT-T-NLGALLKA---KL-----------DQQ-RNDG---------------- ------------------------------------------------------------------------ ------------ >ZP_00424712/1-595 Ribosomal protein S1 [Burkholderia vietnamiensis G4]. ------------------------------------------------------------------------ ----------------------------------------------------------------MVSIWLFQ PAIPAGVAQRSMHNPIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QSGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-AGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKS-VDAKGAVITL---T----GD--IEGYLRAS EI---SQDRV----EDARNVLKEGDKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGL---- QSDS----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >ZP_01563503/1-636 ribosomal protein S1 [Burkholderia cenocepacia MC0-3]. ------------------------------------------------------------------------ -----------------------MKPSTRCCSGTGRSASPPEKAGSGRCSASQARSVFRTLNPVWSSIWPFQ PAIPAGVAQRAMHNQIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QSGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-AGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKT-VDAKGAVVTL---T----GD--IEGYLRAS EI---SQDRV----EDARNVLKEGDKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGL---- QSDS----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_368401/1-576 30S ribosomal protein S1 [Burkholderia sp. 383]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MHNQIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QSGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-TGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKT-VDAKGAVVTL---T----GD--IEGYLRAS EI---SQDRV----EDARNVLKEGDKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGL---- QSDS----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_620452/1-576 ribosomal protein S1 [Burkholderia cenocepacia AU 1054]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MHNQIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QSGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-AGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKT-VDAKGAVVTL---T----GD--IEGYLRAS EI---SQDRV----EDARNVLKEGDKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGL---- QSDS----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_772816/1-576 ribosomal protein S1 [Burkholderia cepacia AMMD]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MHNQIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QSGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-AGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKS-VDAKGAVITL---T----GD--IEGYLRAS EI---SQDRV----EDARNVLKEGDKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGL---- QSDS----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >ZP_01559298/1-576 ribosomal protein S1 [Burkholderia ambifaria MC40-6]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MHNQIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QSGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-AGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKT-VDAKGAVITL---T----GD--IEGYLRAS EI---SQDRV----EDARNVLKEGDKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGL---- QSDS----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >ZP_01570351/1-570 ribosomal protein S1 [Burkholderia multivorans ATCC 17616]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MSDLQTSN----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QAGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-AGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKS-VDAKGAVIAL---T----GD--IEGYLRAS EI---SQDRV----EDARNVLKEGDKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGL---- QADT----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_109111/1-570 30S ribosomal protein S1 [Burkholderia pseudomallei K96243]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MSDLQTSN----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------R--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPIEEF--L-NDQGEVE--V-QAGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVN----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKITGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-AGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NY---VAMNDKGSIVDGVVKS-VDAKGAVITL---T----PD--VEGYLRAS EI---SQDRV----EDARNVLKEGEKVNAMVINIDRKSRGINLSIKAKDS-A------EQQ-EAMRGL---- QADS----------SAAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >ZP_01500675/1-589 ribosomal protein S1 [Burkholderia phymatum STM815]. ------------------------------------------------------------------------ ----------------------------------------------------------------------MM NRDGSPDAAKTMQIQIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------K--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPLEEF--L-NDAGEVE--V-QAGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVE----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKLQGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-TGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NF---VAMNDKGSIVDGVVKT-VDAKGAVVQL---T----AD--VEGYLRAS EI---AQDRV----EDARNVLKEGDKVNAMIINIDRKSRGINLSIKAKDS-A------EQQ-EAMRGL---- QADT----------SSAASGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_560017/1-577 Ribosomal protein S1 [Burkholderia xenovorans LB400]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------MQILIFMSDLQTST----------------PN-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--LT-- ---------------------------K--Q-D--------------------------------------- --------------------------------------------MR-A----------------G--EVISA EVVRV-D--HNF--VVV-NA--G-L----------------KSEAY-IPLEEF--L-NDAGEVE--V-QAGD FVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLSLEKALDNNE---LVTGT ITG--KVKG-GMT-VMVN-GIRAFLPGSLVDTRPV---KDTTPYEGKTLEFRVIKLD-----RKRN-NVVLS RRAVIEATQGEERAKLLETLKEGAIVE----GVVKN-ITDYGAFVDL------GGIDGLLHITDIAWRRVRH PSEVLSVGQEV-TAKILKFDQEKNRVSLGIKQLGDD--PWEGI-SRRYPSGTRLFGKVTNITDYGAFVE-VE SGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLEIDEDRRRI-SLGMKQC-------KPNPWDDFSR NFKKGDKLQGAIKSITDFGVFIG-----LPGGIDGLVHLSDLSWSE-TGEEAVRKYKKGDEVEAIVLGIDVE KERISLGIKQLEGDP--FS-NF---VAMNDKGSIVDGVVKT-VDAKGAVVQL---S----AE--VEGYLRAS EI---AQDRV----EDARNVLKDGDKVNAMIINIDRKSRGINLSIKAKDS-A------EQQ-EAIRGLA--- SSDS----------SSAATGT-T-NLGALLKA---KL-----------DGQ-NQ------------------ ------------------------------------------------------------------------ ------------ >NP_519030/1-562 30S ribosomal protein S1 [Ralstonia solanacearum GMI1000]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------MSQTN---------------------------E-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--IA-- ---------------------------R--S-N--------------------------------------- --------------------------------------------MK-A----------------G--EVISA EVVRI-D--HNF--VVV-NA--G-L----------------KSEAF-VPVEEF--L-NDQGELE--V-QVGD YVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLNLEKALESGE---IISGT VTG--KVKG-GLT-VMVN-GIRAFLPGSLVDVRPI---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRAVVEATLGEERQKLMETLKEGAIVN----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLSVGQEI-TAKILKFDQEKNRVSLGVKQLGED--PWVGI-SRRYPQGTRLFGKVTNLTDYGAFVE-IE AGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLDIDEDKRRI-SLGMKQC-------KANPWDDFAR NHKKGDKLAGQIKSITDFGVFIG-----LPGGIDGLVHLSDLSWQE-TGEEAVRKYKKGDEVEAVVLAIDVE KERISLGIKQLSGDP--FN-NF---ISANDKGSIVSVTIKT-VDPKGAVVQL---A----DD--VEGYLRAS EI---SSDRV----EDARNVLKEGETMTAMIVNIDRKSRNINVSIKAKDS-A------DQQ-EAMQKF---- AQDT----------GTA--GT-T-NLGALLKA---KL-----------NET-NQ------------------ ------------------------------------------------------------------------ ------------ >ZP_00946824/1-566 SSU ribosomal protein S1P [Ralstonia solanacearum UW551]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------MPIFMSQTN---------------------------E-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--IA-- ---------------------------K--S-N--------------------------------------- --------------------------------------------MK-A----------------G--EVISA EVVRI-D--HNF--VVV-NA--G-L----------------KSEAF-VPVEEF--L-NDQGELE--V-QVGD YVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLNLEKALESGE---IISGT VTG--KVKG-GLT-VMVN-GIRAFLPGSLVDVRPI---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRAVVEATLGEERQKLMETLKEGAIVN----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLSVGQEI-TAKILKFDQEKNRVSLGVKQLGED--PWVGI-SRRYPQGTRLFGKVTNLTDYGAFVE-IE AGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLDIDEDKRRI-SLGMKQC-------KANPWDDFAR NQKKGDKLSGQIKSITDFGVFIG-----LPGGIDGLVHLSDLSWQE-TGEEAVRKYKKGDEVEAVVLAIDVD KERISLGIKQLSGDP--FN-NF---ISTNDKGSIVSVTIKA-VDPKGAVVQL---A----DD--VEGYLRAS EI---SSDRV----EDARNVLKEGETMTAMIVNIDRKSRNINVSIKAKDS-A------DQQ-EAMQKF---- AQDT----------GTA--GT-T-NLGALLKA---KL-----------NET-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_582877/1-564 ribosomal protein S1 [Ralstonia metallidurans CH34]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MSDLQTN---------------------------E-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--IA-- ---------------------------R--S-N--------------------------------------- --------------------------------------------MK-A----------------G--EVISA EVVRI-D--HNF--VVV-NA--G-L----------------KSEAF-VPVEEF--L-NDQGELE--V-QAGD YVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLNLEKALEDGE---IISGT VTG--KVKG-GLT-VMVN-GIRAFLPGSLVDVRPI---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRAVVEATLGEERQKLMETLKEGAIVN----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLSVGQEI-TAKILKFDQEKNRVSLGVKQLGED--PWVGI-SRRYPQGTRLFGKVTNLTDYGAFVE-IE AGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLDIDEDKRRI-SLGMKQC-------KANPWDDFSR NHKKGDKLTGQIKSITDFGVFIG-----LPGGIDGLVHLSDLSWQE-SGEEAVRKYKKGDEVEAVVLGIDVD KERISLGIKQLSGDP--FN-NF---ISANDKGSLVNGTIKA-VDAKGAVVQL---A----DD--VEGYLRAS EI---SADRV----EDARNVLKEGEQITALVVNVDRKSRNINLSIKAKDS-A------EQQ-EAMQKF---- QADT----------GTA--GT-T-NLGALLKA---KL-----------GQD-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_725313/1-564 SSU ribosomal protein S1 [Ralstonia eutropha H16]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------MSDLQTN---------------------------E-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--VA-- ---------------------------R--S-N--------------------------------------- --------------------------------------------MK-A----------------G--EVISA EVVRI-D--HNF--VVV-NA--G-L----------------KSEAF-VPVEEF--L-NDQGELE--V-QAGD YVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLNLEKALEDGE---IISGT VTG--KVKG-GLT-VMVN-GIRAFLPGSLVDVRPI---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRAVVEATLGEERQKLMETLKEGAIVN----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLSVGQEI-TAKILKFDQEKNRVSLGVKQLGED--PWVGI-SRRYPQGTRLFGKVTNLTDYGAFVE-IE AGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLDIDEDKRRI-SLGMKQC-------KANPWDDFSR NHKKGDKLAGQIKSITDFGVFIG-----LPGGIDGLVHLSDLSWQE-TGEEAVRKYKKGDEVEAVVLGIDVD KERISLGIKQLSGDP--FN-NF---ISANDKGSLVQGTIKA-VDAKGAVVQL---A----DD--VEGYLRAS EI---SADRV----EDARNVLKEGEQITALVVNVDRKSRNINLSIKAKDS-A------EQQ-EAMQKF---- QADT----------GTA--GT-T-NLGALLKA---KL-----------GQD-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_296774/1-592 30S ribosomal protein S1 [Ralstonia eutropha JMP134]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------MFNLTPLHMADCARSSRRPVYRGLLLTFMSDLQTNE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--IA-- ------------------------------RSN--------------------------------------- --------------------------------------------MK-A----------------G--EVISA EVVRI-D--HNF--VVV-NA--G-L----------------KSEAF-VPVEEF--L-NDQGELE--V-QAGD YVSVAID-ALE--------NGY----GDTI----LSRDKA-------KRLASWLNLEKALEDGE---IISGT VTG--KVKG-GLT-VMVN-GIRAFLPGSLVDVRPI---KDTTPYEGKTLEFKVIKLD-----RKRN-NVVLS RRAVVEATLGEERQKLMETLKEGAIVN----GIVKN-ITDYGAFVDL------GGIDGLLHITDLAWRRVRH PSEVLSVGQEI-TAKILKFDQEKNRVSLGVKQLGED--PWVGI-SRRYPQGTRLFGKVTNLTDYGAFVE-IE AGIEGLVHVSEM--DWTNKNVAPSKVVQLGDEVEVMVLDIDEDKRRI-SLGMKQC-------KANPWDDFSR NHKKGDKLSGQIKSITDFGVFIG-----LPGGIDGLVHLSDLSWQE-TGEEAVRKYKKGDEVEAVVLGIDVD KERISLGIKQLSGDP--FN-NF---ISANDKGSLVTGTIKA-VDPKGAVVQL---A----DD--VEGYLRAS EI---SADRV----EDARNVLKEGEQITALVVNVDRKSRNINLSIKAKDN-V------EQQ-EAMQKF---- QADT----------STA--GT-T-NLGALLKA---KL-----------GQD-NQ------------------ ------------------------------------------------------------------------ ------------ >YP_342243/1-561 Ribosomal protein S1 [Nitrosococcus oceani ATCC 19707]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------GE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--QA-- ---------------------------D--M-P--------------------------------------- --------------------------------------------MA-P----------------G--SIVTG TVMEI-R--SDV--VIV-NA--G-F----------------KSEGV-ISAEQF--R-DEKGNLN--I-SEGD LVEVALE-AIE--------DGF----GETR----LSRQKA-------KEARVWNDLEGAFEAGE---TITGV LTG--KVKG-GFT-VDLN-GVRAFLPGSLVDARPV---RDTAYLESKELEFKLIKLD-----RRRN-NIVVS RRAVMEAEYSAEREALLSSLEEGKTVK----GVVKN-LTDYGAFVDL------GGLDGLLHITDMSWKRIKH PSEVVNIGDDI-TVQVLKFDRERQRVSLGLKQMGED--PWKDL-ARRYLDGTRLFGKVTNVTDYGCFVE-IE EGVEGLVHMSEM--DWTNKNIHPSKMVQVGEEVEVMVLDIDEERRRI-SLGMKQC-------LPNPWEEFAH RYNKDDRVAGEIKSITDFGIFVG-----LEGGIDGLVHLSDISWSA-SGEEIIRDYKKGDQVEAVVLAIDPE RERISLGVKQLEDDP--FS-SY---IATCPKGSIVKGIVKV-VDTRGAVIEL---A----EG--VEGHLRAS EI---ARERI----DDARTSLNVGDSIEAKFTGIDRKNRVITLSVRAKDV-E------EEA-EAIKEYS--- --------------GTGAEAAST-TLGDILKE---QM-----------ERQEEEG----------------- ------------------------------------------------------------------------ ------------ >NP_299717/1-569 30S ribosomal protein S1 [Xylella fastidiosa 9a5c]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------MAVLVFNRVN---------------QM-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--QA-- ---------------------------N--LAK--------------------------------------- --------------------------------------------LK-P----------------G--AIVTG TVVDV-R--GDV--VVI-NA--G-L----------------KSEGI-VPIEQF--R-NDAGEID--V-GVGD QVKVALD-AIE--------NGF----GETI----LSREKA-------KRSMVWDELEEALEKNE---TISGR ING--KVKG-GFT-VDIK-DVRAFLPASLVDVRPV---RDPAYLEGKELEFKLIKLD-----RKRN-NVVVS RRAVVESEHSEEREQLLDKLQEGAVLT----GTVKN-MTDYGAFVDL------GGVDGLLHITDMAWKRVRH PCEVVNIGDEV-EVRVLKFDRERNRVSLGLKQLGED--PWDNI-SRRYPANCRVFGKVSNVTDYGAFVE-IE AGVEGLVHVSEM--DWTNKNVNPSKVVQVGDEVEVMILDVDEERRRI-SLGMKQV-------AANPWETFAL THKKGDKVSGQVKSITDFGIFIG-----LDGGIDGLLHLSDISWNT-TGEDIVRNFKKGDTLETVVLAVDPE RERISLGVKQLEQDP--FG-QY---MATHPKGSKVIGTVKE-VDAKGALIEL---D----EG--IEGYVSAR DI---ANERV----DDATQYLKVGDSVEAKFIGMDRKGRTLQLSIKAKDD-A------EMR-EVLEEYQ--- ----------------SSSGGTT-KLGTLLRE---QL------------GNKPE------------------ ------------------------------------------------------------------------ ------------ >NP_779651/1-558 30S ribosomal protein S1 [Xylella fastidiosa Temecula1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--QA-- ---------------------------N--LAK--------------------------------------- --------------------------------------------LK-P----------------G--AIVTG TVVDV-R--GDV--VVI-NA--G-L----------------KSEGI-VPIEQF--R-NDAGEID--V-GVGD QVKVALD-AIE--------NGF----GETI----LSREKA-------KRSMVWDELEEALEKNE---TISGR ING--KVKG-GFT-VDIK-DVRAFLPASLVDVRPV---RDPAYLEGKELEFKLIKLD-----RKRN-NVVVS RRAVVESEHSEEREQLLDKLQEGAVLT----GTVKN-MTDYGAFVDL------GGVDGLLHITDMAWKRVRH PCEVVNIGDEV-EVRVLKFDRERNRVSLGLKQLGED--PWDNI-SRRYPANCRVFGKVSNVTDYGAFVE-IE AGVEGLVHVSEM--DWTNKNVNPSKVVQVGDEVEVMILDVDEERRRI-SLGMKQV-------AANPWETFAL THKKGDKVSGQVKSITDFGIFIG-----LDGGIDGLLHLSDISWNT-TGEDIVRNFKKGDTLETVVLAVDPE RERISLGVKQLEQDP--FG-QY---MATHPKGSKVIGTVKE-VDAKGALIEL---D----EG--IEGYVSAR DI---ANERV----DDATQYLKVGDSVEAKFIGMDRKGRTLQLSIKAKDD-A------EMR-EVLEEYQ--- ----------------SSSGGTT-KLGTLLRE---QL------------GNKPE------------------ ------------------------------------------------------------------------ ------------ >ZP_01642798/1-616 ribosomal protein S1 [Stenotrophomonas maltophilia R551-3]. ------------------------------------------------------------------------ --------------------------------------------MVVAQSSAVPAPSRNDAWRFSYYTRPAF PGSTNRRAVAIPLKGTPPTHVSNRVN---------------LM-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--QA-- ---------------------------N--LAK--------------------------------------- --------------------------------------------LK-P----------------G--AIVSG TVVEV-R--GDV--VVI-NA--G-L----------------KSEGI-VPIEQF--R-NDAGEID--V-AEGD IVKVALD-SIE--------NGF----GETV----LSREKA-------KRAMVWDELEEALEKNE---TITGR ISG--KVKG-GFT-VDIK-DVRAFLPGSLVDVRPV---RDPAYLEGKELEFKLIKLD-----RKRN-NVVVS RRAVVESEHSEEREQLMDKLQEGAILK----GVVKN-LTDYGAFVDL------GGIDGLLHITDMAWKRVRH PSEVVNVGDEL-DVRVLKFDRERNRVSLGLKQLGED--PWDNI-ARRYPANSRVFGKVSNVTDYGAFVE-IE PGVEGLVHVSEM--DWTNKNVNPSKVVQVGDEVEVMVLDVDEERRRI-SLGMKQV-------AANPWETFAA THKKGDKVSGQIKSITDFGIFIG-----LDGGIDGLVHLSDISWAT-TGEDIVRNFKKGDTLDAVVLAVDPE RERISLGVKQLEQDP--FG-QY---MAANPKGSKVEGVVKE-VDAKGAIIEL---A----DG--IEGYVSAR DI---ANERV----DDATQHLKVGDKVEAKFVGMDRKGRTLQLSIKAKDD-A------EMR-EVLEEYQ--- --------------SSSAASGTT-QLGALLRA---QL-----------SGNKSE------------------ ------------------------------------------------------------------------ ------------ >NP_637550/1-559 30S ribosomal protein S1 [Xanthomonas campestris pv. campestris str. ATCC 33913]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--QA-- ---------------------------N--LAK--------------------------------------- --------------------------------------------LK-P----------------G--SIVTG TVVEV-R--GDV--VVI-NA--G-L----------------KSEGI-VPIEQF--R-NDAGEID--V-GVGD QVKVALD-SIE--------NGF----GETV----LSREKA-------KRAMVWDELEEALEKNE---TITGR ISG--KVKG-GFT-VDIK-DVRAFLPGSLVDVRPV---RDPAYLEGKELEFKLIKLD-----RKRN-NVVVS RRAVVESEHSEEREQLMDKLQEGAILK----GVVKN-LTDYGAFVDL------GGIDGLLHITDMAWKRVRH PSEVVNVGDEL-DVRVLKFDRERNRVSLGLKQLGED--PWDNI-ARRYPANSRVFGKVSNVTDYGAFVE-IE PGVEGLVHVSEM--DWTNKNVNPSKVVQVGDEVEVMVLDVDEERRRI-SLGMKQV-------AANPWETFAA THKKNDKVSGQIKSITDFGIFIG-----LDGGIDGLVHLSDISWNT-TGEDVVRNYKKGDTLEAVVLAVDPE RERISLGVKQLEQDP--FG-QY---MASNPKGSKVEGVVRE-VDAKGATIDL---A----DG--IEGYVAAR DI---ANERV----DDATQHLKVGDKIEAKFVGMDRKGRTLQLSIKAKDD-A------EMR-EVLEEYQ--- ----------------SASGGTT-QLGALLRA---QL-----------NSNKSE------------------ ------------------------------------------------------------------------ ------------ >YP_200819/1-561 30S ribosomal protein S1 [Xanthomonas oryzae pv. oryzae KACC10331]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--QA-- ---------------------------N--LAK--------------------------------------- --------------------------------------------LK-P----------------G--SIVTG TVVEV-R--GDV--VVI-NA--G-L----------------KSEGI-VPIEQF--R-NDAGEID--V-GVGD QVKVALD-SIE--------NGF----GETV----LSREKA-------KRAMVWDELEDALENNE---TITGR ISG--KVKG-GFT-VDIK-DVRAFLPGSLVDVRPV---RDPAYLEGKELEFKLIKLD-----RKRN-NVVVS RRAVVESEHSEEREQLMDKLQEGAILK----GVVKN-LTDYGAFVDL------GGIDGLLHITDMAWKRVRH PSEVVNVGDEL-DVRVLKFDRERNRVSLGLKQLGED--PWDNI-ARRYPANSRVFGKVSNVTDYGAFVE-IE PGVEGLVHVSEM--DWTNKNVNPSKVVQVGDEVEVMVLDVDEERRRI-SLGMKQV-------AANPWETFAA THKKNDKVSGQIKSITDFGIFIG-----LDGGIDGLVHLSDISWNT-TGEDVVRNYKKGDTLEAVVLAVDPE RERISLGVKQLEQDP--FG-QY---MASNPKGSKVEGVVRE-VDAKGATIDL---A----DG--IEGYVASR DI---ANERV----DDATQHLKVGDKIEAKFVGMDRKGRTLQLSIKAKDD-A------EMR-ETLEDYQ--- --------------SASASGGMT-QLGALLRA---QL-----------NSNKSE------------------ ------------------------------------------------------------------------ ------------ >NP_642615/1-561 30S ribosomal protein S1 [Xanthomonas axonopodis pv. citri str. 306]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--QA-- ---------------------------N--LAK--------------------------------------- --------------------------------------------LK-P----------------G--SIVTG TVVEV-R--GDV--VVI-NA--G-L----------------KSEGI-VPIEQF--R-NDAGEID--V-GVGD QVKVALD-SIE--------NGF----GETV----LSREKA-------KRAMVWDELEEALEKNE---TITGR ISG--KVKG-GFT-VDIK-DVRAFLPGSLVDVRPV---RDPAYLEGKELEFKLIKLD-----RKRN-NVVVS RRAVVESEHSEEREQLMDKLQEGAILK----GVVKN-LTDYGAFVDL------GGIDGLLHITDMAWKRVRH PSEVVNVGDEL-DVRVLKFDRERNRVSLGLKQLGED--PWDNI-ARRYPANSRVFGKVSNVTDYGAFVE-IE PGVEGLVHVSEM--DWTNKNVNPSKVVQVGDEVEVMVLDVDEERRRI-SLGMKQV-------AANPWETFAA THKKNDKVSGQIKSITDFGIFIG-----LDGGIDGLVHLSDISWNT-TGEDVVRNYKKGDTLEAVVLAVDPE RERISLGVKQLEQDP--FG-QY---MASNPKGSKVEGVVRE-VDAKGATIDL---A----DG--IEGYVAAR DI---ANERV----DDATQHLKVGDKIEAKFVGMDRKGRTLQLSIKAKDD-A------EMR-ETLEDYQ--- --------------SASASGGMT-QLGALLRA---QL-----------NNNKSE------------------ ------------------------------------------------------------------------ ------------ >YP_364227/1-561 30S ribosomal protein S1 [Xanthomonas campestris pv. vesicatoria str. 85-10]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--QA-- ---------------------------N--LAK--------------------------------------- --------------------------------------------LK-P----------------G--SIVTG TVVEV-R--GDV--VVI-NA--G-L----------------KSEGI-VPIEQF--R-NDAGEIN--V-GVGD QVKVALD-SIE--------NGF----GETV----LSREKA-------KRAMVWDELEEALEKNE---TITGR ISG--KVKG-GFT-VDIK-DVRAFLPGSLVDVRPV---RDPAYLEGKELEFKLIKLD-----RKRN-NVVVS RRAVVESEHSEEREQLMDKLQEGAILK----GVVKN-LTDYGAFVDL------GGIDGLLHITDMAWKRVRH PSEVVNVGDEL-DVRVLKFDRERNRVSLGLKQLGED--PWDNI-ARRYPANSRVFGKVSNVTDYGAFVE-IE PGVEGLVHVSEM--DWTNKNVNPSKVVQVGDEVEVMVLDVDEERRRI-SLGMKQV-------AANPWETFAA THKKNDKVSGQIKSITDFGIFIG-----LDGGIDGLVHLSDISWNT-TGEDVVRNYKKGDTLEAVVLAVDPE RERISLGVKQLEQDP--FG-QY---MASNPKGSKVEGVVRE-VDAKGATIDL---A----DG--IEGYVAAR DI---ANERV----DDATQHLKVGDKIEAKFVGMDRKGRTLQLSIKAKDD-A------EMR-ETLEDYQ--- --------------SASASGGMT-QLGALLRA---QL-----------NNNKSE------------------ ------------------------------------------------------------------------ ------------ >ZP_01125910/1-563 30S ribosomal protein S1 [Nitrococcus mobilis Nb-231]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EAS--LT-- ---------------------------Q--A-N--------------------------------------- --------------------------------------------LR-P----------------G--AIVMG KVVAI-E--GED--VIV-NA--G-L----------------KSEAI-IPLEEF--V-DDDGQVE--V-NVGD DIEVALD-AVE--------DGF----GETR----LSREKA-------KRARAWTHLEKAYEASE---SVTGQ ISG--KVKG-GFT-VDLG-HIRAFLPGSLVDIRPV---RDTTYLEGKDLEFKVIKLD-----PRRN-NVVVS RRAVVEEEYSAEREALLEKLQEGQVLK----GIVKN-LTDYGAFVDL------GGIDGLLHITDMAWRRVKH PSEVVNVGDEV-DVKVLKFDRERNRVSLGLKQLGED--PWENI-ARRYPESSRVFGRVTNITDYGSFVE-IE EGVEGLVHVSEM--DWTNKNVNPAKVVTIGEEVEVMVLDIDEERRRV-SLGMKQC-------QANPWDEFAA KNNKGDHVCGQIKSITDFGIFVG-----LAGGIDGLVHLSDLSWNI-TGEEAVRRYKKGEEVETVVLSVDPE RERISLGIKQLEQDP--LS-SW---VAEHPKGSLVKGSVKE-VDAKGAVIEL---G----GE--VLGYLRAA DI---GRQRV----DDARTALGEGDAVEAKFMAVDRRNRMINLSIKAKDQ-Q------TER-ESVEDYA--- RPS--------------SAGT-T-TLGDLLKE---QM-----------GSRAQDAEDE-------------- ------------------------------------------------------------------------ ------------ >YP_741775/1-561 ribosomal protein S1 [Alkalilimnicola ehrlichei MLHE-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LA-- ---------------------------N--T-D--------------------------------------- --------------------------------------------MR-P----------------G--AIVMG KVVAI-D--GDH--VVV-NA--G-L----------------KSEAV-IPASQF--Y-DEEGNLE--V-AEGD EVEVSLD-AVE--------DGS----GETR----LSREKA-------KRAYAWRFLEDAYEKSE---AVKGQ ISG--KVKG-GFT-VDLG-HIRAFLPGSLVDIRPV---RDTTYLEGRDLEFKVIKLD-----PRRN-NVVVS RRAVVEEEYSAEREQLLEKLQEGQVLK----GIVKN-LTDYGAFVDL------GGMDGLLHITDMAWRRVKN PSEVVEVGQEI-EVKVLKFDRERNRVSLGLKQLGAD--PWENI-GGRYPEGARVPGRVTNITEYGAFVE-IE EGVEGLVHVSEM--DWTNKNVNPAKMVSIGDEVEVMILDIDEERRRI-SLGMKQC-------LPNPWDEFAA THQKGDRVTGQIKSITDFGIFVG-----LDGGIDGLVHLSDLSWGE-AGEEAVRNYRKGEEVEAVVLSVDPE RERISLGIKQLEQDP--FG-SW---LADHPKGSLVKGTVKD-VEAKGATVTL---E----GG--MEGYVRAS DI---SRDRV----EDARTVLKEGEEIEAKFVGVDRRNRMANLSIKAKDQ-V------EEQ-RLVQDHA--- RPT-------------GTAGT-T-ALGDLLKE---QL-----------GEQNDDR----------------- ------------------------------------------------------------------------ ------------ >YP_113870/1-555 30S ribosomal protein S1 [Methylococcus capsulatus str. Bath]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------GE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LA-- ---------------------------K--A-E--------------------------------------- --------------------------------------------MR-A----------------G--SIITG TVVDI-G--TDA--VVV-NA--G-L----------------KSEGV-IPKWQF--L-NADGQLE--V-QVGD QVEVALD-MVE--------DGL----GATL----LSRDKA-------KKLKAWEDLEKAFENNE---TVVGR IVG--KVRG-GFT-VAIG-ALRAFLPGSLVDVRPV---RDTAFLEGRDLEFKVIKID-----QKRN-NVVLS RRAVVESEFSAEKEALMESLKEGAIVT----GVVKN-LTDYGAFIDL------GGIDGLLHITDMAWKRVRH PSEAVQIGQEL-QVKVLKYDQEKNRVSLGLKQLGED--PWVNI-ARRYPAGTRLFGKVSNLTDYGCFVE-LE EGVEGLVHVSEM--DWTNKNVNPAKVVQLGEEVEVMVLDIDEERRRI-SLGMKQC-------RQNPWDEFAA THKKGEKIRGTIKSITDFGIFIG-----LDGNIDGLVHLSDISWSV-PGEEAIRQFKKGDELETVILAIDPE RERISLGIKQLEQDP--FQ-NF---LAAHDKGSIVRGVVKE-VDAKGAVITL---A----DN--VEGYLRAS EI---QRDRV----EDARALLNVGDEIEAKFIGVDKKTKSISLSIKSKDQ-D------EEA-AAIKDYS--- QQV--------------SGTP---TLGDIFKE---QM-----------ENR--------------------- ------------------------------------------------------------------------ ------------ >YP_046948/1-557 30S ribosomal protein S1 [Acinetobacter sp. ADP1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ALF---EES--EL-- ---------------------------N--L-N--------------------------------------- --------------------------------------------VE-K----------------G--AVIQG VVVNI-D--SDW--VTV-DT--G-L----------------KSEGV-VDRAEF--L-NEQRELE--V-QVGD TVDVVVE-ALD--------NGM----GQTV----LSREKA-------KRAETWTKLEKIFEDGE---IVTGV ISG--KVKG-GFT-VDIG-PVRAFLPGSLVDTRPI---RDTTHLEGKELEFKVIKLD-----AKRN-NVVVS RRAVMEAESSADREALLAQLEEGQTVT----GTIKN-LTDYGAFVDL------GGIDGLLHITDMAWKRIKH PSEVVEVGQEV-TVKVLKFDRERNRVSLGLKQLGED--PWLAI-MSRYPKGSIVKARVTNLTDYGCFAE-IA EGVEGLVHVSEM--DHTNKNIHPSKVVQIGDEVDVMVLEVDEERRRI-SLGIKQT-------RANPWEEFAK AHEKGEKVSGTIKSITDFGIFIG-----LPGGIDGLVHLSDISWNE-QGEEAIRRYKKGDTVEAVILSVDAE GNRISLGIKQLNSDP--FN-DF---LAANERGALVKGTVTA-VDAKGATVKL---G----DE--IEATLKAS EI---NRDRV----EDATKFLEVGQEVEAKIINVDRKSRSINLSIKAKDE-A------EEK-EAVANLRTTS VS---------------QDNGPK-TIGDLIKA---QM-----------K----------------------- ------------------------------------------------------------------------ ------------ >YP_264776/1-563 30S ribosomal protein S1 [Psychrobacter arcticus 273-4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EASIEET-- ---------------------------G--L-D--------------------------------------- --------------------------------------------IE-R----------------G--SVITG TVVAI-D--NDW--ITV-DT--G-L----------------KSEGI-VAREEF--L-SEEGELE--V-EVGD SVDVVVE-AVD--------NGM----GQTL----LSREKA-------KRVETWNFLEKISDNDE---IVKGI ISS--KVKG-GFT-VDIG-SVRAFLPGSLVDVRPI---RDTTHLEGKELEFKVIKLD-----QKRN-NVVVS RRAVMEAENSAEREELLNKLEEGIEIE----GIVKN-LTDYGAFVDL------GGIDGLLHITDMAWRRIKH PSEVVEVGQDL-KVKVLKFDRERNRVSLGLKQLGTD--PWDNV-GGTYPVGSVVKARVTNLTDYGCFAE-IS EGIEGLVHVSEM--DHTNKNIHPSKVVQVGDEVEVMILDIDEERRRI-SLGIKQT-------LANPWDEFDK KHERGDKITGTIKSITDFGIFIG-----LDGGIDGLVHLSDISWNE-TGEDAIRNYNKGDTVEAMVLSVDSE ANRISLGVKQLTSDP--FN-EY---LVNNDRGAIVNGKVKE-VDAKGATIEL---A----DE--VEAYLRAS EI---QRDRV----EDATKHLTVGDDVEAKIISVDRKTRNISLSIKAKDE-A------EER-QAIKELSSTT TTTT----------AAGSDAQPK-TIGDLIKE---QM-----------Q----------------------- ------------------------------------------------------------------------ ------------ >YP_580934/1-563 ribosomal protein S1 [Psychrobacter cryohalolentis K5]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EASIEET-- ---------------------------G--L-D--------------------------------------- --------------------------------------------IE-R----------------G--SVITG TVVAI-D--NDW--ITV-DT--G-L----------------KSEGI-VAREEF--L-SEEGELE--V-EVGD TVDVVVE-AVD--------NGM----GQTL----LSREKA-------KRVETWNFLEKISDNDE---IVKGI ISS--KVKG-GFT-VDIG-SVRAFLPGSLVDVRPI---RDTTHLEGKELEFKVIKLD-----QKRN-NVVVS RRAVMEAENSAEREELLNKLEEGIEIE----GIVKN-LTDYGAFVDL------GGIDGLLHITDMAWRRIKH PSEVVEVGQDL-KVKVLKFDRERNRVSLGLKQLGTD--PWDNV-GGTYPVGSVVKARVTNLTDYGCFAE-IS EGIEGLVHVSEM--DHTNKNIHPSKVVQVGDEVEVMILDIDEERRRI-SLGIKQT-------LANPWDEFDK KHERGDKITGTIKSITDFGIFIG-----LDGGIDGLVHLSDISWNE-TGEDAIRNYNKGDTVEAMVLSVDSE ANRISLGVKQLTSDP--FN-EY---LVNNDRGAIVNGKVKE-VDAKGATIEL---A----DE--VEAYLRAS EI---QRDRV----EDATKHLTVGDDVEAKIISVDRKTRNISLSIKAKDE-A------EER-QAIKELSSTT TTST----------AAGSDAQPK-TIGDLIKE---QM-----------Q----------------------- ------------------------------------------------------------------------ ------------ >YP_693465/1-560 30S ribosomal protein S1 [Alcanivorax borkumensis SK2]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---EES--LK-- ---------------------------D--L-D--------------------------------------- --------------------------------------------VA-R----------------G--SIIKG TVVSI-D--SDW--VTV-NA--G-L----------------KSEGI-IAREEF--L-NEAGELE--I-VEGD EVDVAVD-AID--------DGM----GFTR----LSREKA-------KRAEVWGELEKAFDEDE---IVKGM ISG--KVKG-GFT-VDIG-PIRAFLPGSLVDIRPV---RDVAHLEGKELDFKVIKLD-----PKRN-NVVVS RRAVMEAEHSAEREQLLESLQEGMEVK----GIVKN-LTDYGAFVDL------GGIDGLLHITDMAWKRIKH PSEIVEVGQEI-DVKVLKFDREKMRVSLGLKQLGED--PWHDI-VGKYPEGTRVKAKVTNLTDYGCFAE-IE EGVEGLVHVSEM--DWTNKNIHPSKVVEIGDEVEVMILDIDEDRRRI-SLGIKQC-------QSNPWDAFEE KYQKGERISGKIKSITDFGIFIG-----LEGGIDGLVHLSDISWEE-QGEDAVRNFNKGDELETVVLSIDAE RERISLGIKQLTDDP--FA-QY---VAANDKGTIVKGVVKA-VDAKAAIVEL---A----EN--VEATLRAS EI---SRDRV----NDATEVLKVGDEVEAKITNVDRKNRVLSLSIKSKDQ-A------DER-EAIEGHQ--E QQD--------------ANAP-K-TIGDLIKK---QM-----------ESSNES------------------ ------------------------------------------------------------------------ ------------ >ZP_01075175/1-561 30S ribosomal protein S1 [Marinomonas sp. MED121]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TQ-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LL-- ---------------------------T--V-E--------------------------------------- --------------------------------------------MA-P----------------G--SIVTG IIVDI-D--NEW--VTV-HA--G-L----------------KSEGV-IPRAQF--L-SESGEFT--L-NIGD EVKVALD-AVE--------DGF----GETK----LSREKA-------KRAETWEVLEKAYEDSE---IVVGV ING--KVKG-GFT-VDIA-NIRAFLPGSLVDVRPI---RDTSHLEGVDLEFKLIKLD-----QKRN-NVVVS RRAVMEATNSAERETLLASLEEGQEVK----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIIAVGDEI-DVKVLKFDRERNRVSLGLKQLGED--PWVAI-KARYPEGTKVTAKVTNLTDYGCFAE-LE EGVEGLVHVSEM--DWTNKNIHPSKVVQIGDEVEVMILDIDEERRRI-SLGVKQC-------TPNPWEEFAT SYNKGDKISGGIKSITDFGVFIG-----LEGGIDGLVHLSDLSWDE-TGEEAVRQYKKGDNLETVVLSIDAE RERISLGVKQLEEDP--FV-GF---AAENDKGAIVTGTVKE-VDAKGAVVVL---A----EG--VEATLKVS EL---SRDRV----EDATSVLKEGDSVEAAVINVDRKARTIALSIKQKDA-S------EEK-AAMKSHS--E KAAQ----------VE-ANGP-T-TIGDLIKA---QL-----------ENQN-------------------- ------------------------------------------------------------------------ ------------ >YP_574213/1-559 ribosomal protein S1 [Chromohalobacter salexigens DSM 3043]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EQS--LQ-- ---------------------------D--I-N--------------------------------------- --------------------------------------------ME-P----------------G--AIVMA TVVDI-E--GDW--ITV-NA--G-L----------------KSEGQ-IPAAQF--R-DDNGELT--I-AVGD EVKVALE-AVE--------DGF----GETR----LSREKA-------KRAEAWKELEAAFEKDE---IVKGV ING--KVKG-GFT-VDVS-SIRAFLPGSLVDVRPV---RDTAHLEHKELDFKVIKLD-----PKRN-NVVVS RRAVLEAENSAEREALLATLQEGQQIN----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVAVGDEV-NVKVLKFDRERNRVSLGLKQLGED--PWVNI-KDRYPENTRVNARVTNLTDYGCFAE-LE EGVEGLVHVSEM--DWTNKNIHPSKVVQVGDDVEVMVLDIDEERRRI-SLGIKQC-------TTNPWEDFSA RYNKGDRVAGTIKSITDFGIFIG-----LEGGIDGLVHLSDISWSE-PGEEAVRKFKKGDEAEAVILSIDPE RERISLGIKQLETDP--VS-EY---LAVNDKGSVVTGRVVE-VDAKEAHVEL---A----TD--VVAVLKAS EI---SADRV----EDARNVLSEGDSVEAKIVGVDRKNRAINLSVKAKDQ-T------DTR-RAMGKLR--D QEAE----------P--QSGP-T-TIGDLIKQ---QM-----------GGE--------------------- ------------------------------------------------------------------------ ------------ >ZP_01627119/1-557 Flagellar biosynthesis protein FliR [marine gamma proteobacterium HTCC2080]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LK-- ---------------------------T--V-D--------------------------------------- --------------------------------------------ME-P----------------G--SIVTG VVIDI-D--NEW--VTV-HA--G-L----------------KSEGV-IPLDQF--T-NANGECT--L-NIGD EVQVALE-TVE--------DGF----GETK----LSREKA-------KRAEAWKRLEAAHVADE---VVTGI ING--KVKG-GFT-VDIE-SIRAFLPGSLIDVRPV---RETTHLEGKELEFKVIKLD-----QKRN-NVVVS RRAVMEAANSQEREELLENLQEGMSVK----GVVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVEVGQEM-DVKILKFDRERNRVSLGLKQLGED--PWVEI-TNRYPEGARVNAKVTNLTDYGCFAE-IE EGVEGLVHVSEM--DWTNKNVHPSKIVQLGDEVEVMVLDIDEDRRRI-SLGIKQC-------TQNPWDAFAS DHAKGDRISGTIKSITDFGIFIG-----LDGAIDGLVHLSDISWNE-TGEEAVRNYKKGDEIETVILSIDPE RERISLGVKQMEEDA--FT-LY---VSDNDRGTIVTGKALE-VDAKGALIKL---S----DE--VSGYLKVG DI---SVERI----EDARSVINVGDSVEAKITNVDRKNRTLGLSIKAKDM-A------DEK-EAVETLK--Q QDE--------------AASP-G-TIGDLIKA---KM-----------DSQ--------------------- ------------------------------------------------------------------------ ------------ >YP_527609/1-560 Flagellar biosynthesis protein FliR [Saccharophagus degradans 2-40]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------IE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LK-- ---------------------------T--V-D--------------------------------------- --------------------------------------------MV-P----------------G--SIVTG VVIDI-D--QDW--VTV-HA--G-L----------------KSEGV-IPAEQF--Y-NDKGELE--L-SIGD EVQVALE-SVE--------DGF----GETR----LSREKA-------KRAESWKVLEAAHDAEE---VITGV ING--KVKG-GFT-VDVA-GIRAFLPGSLVDVRPV---RETTHLEGKELEFKVIKLD-----QRRN-NVVVS RRAVMEQANSEEREELLANLQEGMAVK----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVAVGDEI-DVKVLKFDRERNRVSLGLKQLGED--PWSAI-TQRYPEGAKVKARITNLTDYGCFAE-IE EGVEGLVHVSEM--DWTNKNIHPSKVVSLGDEVEVMILDIDEERRRI-SLGIKQC-------QENPWDAFSN QFAKGDKISGKIKSITDFGIFIG-----LDGGIDGLVHLSDISWNE-AGEEAVRKFKKGDEIETVVLAIDPE RERISLGVKQLDEDP--FS-AY---VAENDKGTIVTGTVKE-VDAKEAVILL---A----DD--ITGTLKAS EI---SRDKV----EDARNVLKEGDEVEAKITNVDRKNRAIILSVKAKDV-A------DEK-AAIKEHS--T KAAE-------------AAQP-A-TIGDLIKA---EM-----------ENKN---S---------------- ------------------------------------------------------------------------ ------------ >ZP_01617760/1-559 30S ribosomal protein S1 [marine gamma proteobacterium HTCC2143]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------DLF---EES--LG-- ---------------------------T--I-D--------------------------------------- --------------------------------------------MK-P----------------G--SIVTG VVIDI-D--SDW--VTV-HA--G-L----------------KSEGV-IPRIEF--L-TESGELK--L-EIGD EVQVALE-AVE--------DGW----GATK----LSREKA-------KRAEAWKVLEAAYAAEE---SVVGI ING--KVKG-GFT-VDVN-SIRAFLPGSLVDVRPV---RETTHLEGKELEFKVIKLD-----QKRN-NVVVS RRAVMETANSAERDELLATLQEGQSVK----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVNVGDEI-DVKVLKFDRERNRVSLGLKQLGED--PWVSI-TGRYPEGARVKATITNLTDYGCFAE-IE EGVEGLVHVSEM--DWTNKNIHPSKVVNLGDEVEVMILDIDEERRRI-SLGIKQC-------MENPWDAFGR QFNKGDKISGGIKSITDFGIFIG-----LDGAIDGLVHLSDISWNE-TGEDAVRKYKKGDEIETVILSVDPE RERISLGIKQLEDDP--FN-NY---ATANDKNSIVMGTVKE-VDAKAAVITL---A----ED--IEGTLKAS EI---SRDKV----EDARNALKEGDEVEVKIISIDRKNRTIALSIKAKDM-A------DEK-EAVKAHK--V AETE-------------SAAP-A-TIGDLIKA---QM-----------EGKE-------------------- ------------------------------------------------------------------------ ------------ >ZP_01114539/1-560 30S ribosomal protein S1 [Reinekea sp. MED297]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------TE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LK-- ---------------------------T--I-E--------------------------------------- --------------------------------------------ME-P----------------G--SIVTG VVVDI-D--SDW--VTV-HA--G-L----------------KSEGV-IPRNQF--I-NDAGELE--I-AVGD EVKVALE-AVE--------DGF----GDTR----LSREKA-------KRAEAWAELEKAYEAKE---VVKGV ING--KVKG-GFT-VDVS-SVRAFLPGSLVDIRPV---RDTLHLEGKELEFKVIKLD-----QRRN-NVVVS RRAVLEASNSAEREELLENLQEGQEIK----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVQVGDEI-DVKVLKFDRERNRVSLGLKQLGED--PWVDI-KARYPEEAKVTAKVTNLTDYGCFAE-LE EGVEGLVHVSEM--DWTNKNIHPSKVVQVGDEIEVMVLDIDEERRRI-SLGIKQT-------VVNPWEDFAN RYNKSDKVSGKIKSITDFGIFIG-----LEGGIDGLVHLSDISWNE-SGEEAVRKYKKGDELETTILSIDPE RERISLGIKQLDMDP--FA-EY---AAENDKGTIVKGTVKE-VDAKAAVITL---A----ED--IEGVLKAS EI---SRDKV----EDARNVLNEGEEVEAKIVSIDRKNRVISLSIKAKDF-D------DEK-AAVKELK--D KAVE-------------ASGP-T-TIGDLIKA---KL-----------EEGN---D---------------- ------------------------------------------------------------------------ ------------ >ZP_01305932/1-560 ribosomal protein S1 [Oceanobacter sp. RED65]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LS-- ---------------------------G--L-D--------------------------------------- --------------------------------------------MQ-Q----------------G--SIVTG TVVDI-D--SDW--VIV-NA--G-L----------------KSEAV-IPRNQF--L-DDNGELE--V-AVGD EVPVSLE-AVE--------DGF----GETK----LSREKA-------KRAESWKELEKAFEAQE---VVTGV ING--KVKG-GFT-VDVA-SIRAFLPGSLVDVRPV---RDTAHLEGKELEFKVIKLD-----QKRN-NVVVS RRAVLETANSQERDELLANLQEGQEVT----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVNVGDEI-QVKVLKFDRERNRVSLGLKQLGED--PWVAI-KARYPENTKVTAKVTNLTDYGCFAE-LE EGVEGLVHVSEM--DWTNKNIHPSKVVQVGDDVEVMVLDIDEERRRI-SLGIKQC-------QVNPWEEFSS QFNKGDKISGKIKSITDFGIFIG-----LDGGIDGLVHLSDISWNE-QGEDAVRNYKKGDELETIILSIDPE RERISLGVKQLERDP--FA-EF---VAENDKGTIVKGKVIE-VDAKAATIEI---A----EG--VEATLRAS EI---SRDRV----EDARNALKEGDEVEAKIISVDRKNRNIALSVKSKDE-V------DDK-EAIKQLR--E KEAE-------------QAGP-T-TIGDLIKE---QL-----------NSQK---D---------------- ------------------------------------------------------------------------ ------------ >ZP_01526460/1-560 ribosomal protein S1 [Pseudomonas mendocina ymp]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LK-- ---------------------------S--L-D--------------------------------------- --------------------------------------------MQ-P----------------G--AIITG IVVDI-D--GDW--VTV-HA--G-L----------------KSEGV-IPLDQF--F-NEQGELT--I-KVGD EVHVALD-AVE--------DGF----GETK----LSREKA-------KRAESWLVLEAAFNAEE---VVKGV ING--KVKG-GFT-VDVN-GIRAFLPGSLVDVRPV---RDTTHLEGKELEFKVIKLD-----QKRN-NVVVS RRSVLEAENSAEREALLESLQEGQQVK----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVNVGDEI-DVKVLKYDRERNRVSLGLKQLGED--PWVAI-KARYPENTRVMARVTNLTDYGCFAE-LE EGVEGLVHVSEM--DWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRI-SLGIKQC-------KTNPWEDFSG QFNKGDKISGTIKSITDFGIFIG-----LDGGIDGLVHLSDISWNE-AGEEAVRRFKKGDELETVILSVDPE RERISLGIKQLEDDP--FS-NY---VSLNDKGTIVRGVVKE-VDAKGAIIDL---G----NE--IEATLKAS EI---SRDRV----EDARNVLKEGDEVEAKIISVDRKSRVISLSIKSKDV-E------DEK-DAMKELR--N KQDV----------E--STGP-T-TIGDLIRA---QM-----------ENQN-------------------- ------------------------------------------------------------------------ ------------ >ZP_00419288/1-559 Ribosomal protein S1 [Azotobacter vinelandii AvOP]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LK-- ---------------------------S--L-D--------------------------------------- --------------------------------------------MQ-P----------------G--AIITG IVVDI-D--GDW--VTV-HA--G-L----------------KSEGV-IPVEQF--Y-NEQGELT--I-KVGD EVHVALD-AVE--------DGF----GETK----LSREKA-------KRAESWLVLEAAFAADE---VVKGI ING--KVKG-GFT-VDIN-GIRAFLPGSLVDVRPV---RDTTHLEGKELEFKVIKLD-----QKRN-NVVVS RRSVLEAENSAEREALLESLQEGQQVK----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVNVGDEI-DVKVLKFDRERNRVSLGLKQLGED--PWVAI-KARYPEGTRVMARVTNLTDYGCFAE-LE EGVEGLVHVSEM--DWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRI-SLGIKQC-------KSNPWEDFSS RYNKGDRITGTIKSITDFGIFIG-----LEGGIDGLVHLSDISWNE-QGEEAVRRFKKGDELETVILSVDPE RERISLGVKQLADDP--FS-SY---ASLNEKGSIVHGTVKE-VDAKGAIVDL---G----ND--IEAVLKAS EI---SRDRV----EDARNVLKEGDEVEAKIISIDRKSRVISLSIKAKDV-D------DEK-DAIKELR--- KQET----------E--APGP-T-TIGDLIRA---QM-----------GNQS-------------------- ------------------------------------------------------------------------ ------------ >NP_251852/1-559 30S ribosomal protein S1 [Pseudomonas aeruginosa PAO1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------M-------SE-SF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------ELF---EES--LK-- ---------------------------S--L-D--------------------------------------- --------------------------------------------MQ-P----------------G--AIITG IVVDI-D--GDW--VTV-HA--G-L----------------KSEGV-IPVEQF--Y-NEQGELT--I-KVGD EVHVALD-AVE--------DGF----GETK----LSREKA-------KRAESWIVLEAAFAADE---VVKGV ING--KVKG-GFT-VDVN-GIRAFLPGSLVDVRPV---RDTTHLEGKELEFKVIKLD-----QKRN-NVVVS RRSVLEAENSAEREALLESLQEGQQVK----GIVKN-LTDYGAFVDL------GGVDGLLHITDMAWKRIKH PSEIVNVGDEI-DVKVLKFDRERNRVSLGLKQLGED--PWVAI-KARYPEGTRVMARVTNLTDYGCFAE-LE EGVEGLVHVSEM--DWTNKNIHPSKVVQVGDEVEVQVLDIDEERRRI-SLGIKQC-------KSNPWEDFSS QFNKGDRISGTIKSITDFGIFIG-----LDGGIDGLVHLSDISWNE-VGEEAVRRFKKGDELETVILSVDPE RERISLGIKQLEDDP--FS-NY---ASLHEKGSIVRGTVKE-VDAKGAVISL---G----DD--IEGILKAS EI---SRDRV----EDARNVLKEGEEVEAKIISIDRKSRVISLSVKSKDV-D------DEK-DAMKELR--- KQEV----------E--SAGP-T-TIGDLIRA---QM-----------ENQG-------------------- ------------------------------------------------------------------------ ------------ >ZP_01293446/1-542 hypothetical protein PaerP_01004661 [Pseudomonas aeruginosa PA7]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ 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