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tmRNA tag peptides in alphabetical order (537 sequences)

View them ordered phylogenetically instead...

ID Species Name Sequence
ACID.CAPS. Acidobacterium capsulatum strain ATCC 51196 ANNNLALAA*
ACID.FERR.-1. Acidithiobacillus ferroxidans strain ATCC 23270 ANDSNYALAA*
ACID.FERR.-2. Acidithiobacillus ferroxidans ANDSNYALAA*
ACID.SPEC. Acidobacterium Ellin6076 ANTQFAYAA*
ACIN.ADP1. Acinetobacter ADP1 ANDETYALAA*
ACTI.ACTI. Actinobacillus actinomycetemcomitans ANDEQYALAA**
ACTI.NAES. Actinomyces naeslundii strain MG1 ADNTRTDFALAA*
ACTI.PLEU. Actinobacillus pleuropneumoniae ANDEQYALAA**
AERO.HYDR.-1. Aeromonas hydrophila strain PPD134/91 ANDENYALAA**
AERO.HYDR.-2. Aeromonas hydrophila strain ATCC 7966 ANDENYALAA**
AERO.SALM. Aeromonas salmonicida ANDENYALAA**
AGRO.TUME.-1 Agrobacterium tumefaciens strain C58 ANDNNAKEYALAA*
AGRO.TUME.-2. Agrobacterium tumefaciens NTL4 ANDNNAKECALAA*
AGRO.VITI. Agrobacterium vitis S4 ANDNNAQGYAVAA*
ALCA.EUTR. Alcaligenes eutrophus ANDERYALA*
ALCA.FAEC. Alcaligenes faecalis ANDERFALAA*
ALCA.VISC. Alcaligenes viscolactis strain S-2 ANDERFALAA*
ALPH.SAR1. Alphaproteobacteria SAR-1 ANDELALAA*
AMPH.COFF.CL. Amphora coffaeformis chloroplast ATIITWFISKIINRNACSLQFVV*
ANAB.SPEC. Anabaena sp. PCC7120 ANNIVKFARKDALVAA*
ANAB.VARI. Anabaena variabilis ANNIVKFARKDALVAA*
ANAP.MARG. Anaplasma marginale strain St. Maries ANDDFVAANDNMETAFVAAA*
ANAP.PHAG. Anaplasma phagocytophila strain HZ ANDDFVAANDNVETAFVAAA*
AQUI.AEOL. Aquifex aeolicus APEAELALAA*
ARTH.SPEC. Arthrobacter species strain FB24 AKQTRTDFALAA*
AZOA.SPEC.-1. Azoarcus species BH72 TNANDERFALAA*
AZOA.SPEC.-2. Azoarcus species EbN1 ANDERFAVAA*
AZOS.ORYZ. Azospira oryzae strain PS ANDERFAIAA*
AZOT.VINE. Azotobacter vinelandii ANDDNYALAA*
BACI.ANTH. Bacillus anthracis strain Ames and A2012 GKQNNLSLAA*
BACI.CERE. Bacillus cereus strain 10987 GKQNNLSLAA*
BACI.CLAU. Bacillus clausii strain KSM-K16 GKENNNFALAA*
BACI.HALO. Bacillus halodurans GKENNNFALAA*
BACI.LICH. Bacillus licheniformis strain ATCC 14580 GKSNQNLALAA*
BACI.MEGA. Bacillus megaterium GKSNNNFALAA***
BACI.SPEC.PH.G. Bacteriophage G of Bacillus AKLNITNNELQVA*
BACI.STEA. Bacillus stearothermophilus GKQNYALAA*
BACI.SUBT. Bacillus subtilis GKTNSFNQNVALAA**
BACI.THUR. Bacillus thuringiensis serovar konkukian strain 97-27 GKQNNLSLAA*
BACT.FORS. Bacteroides forsythus strain ATCC 43037 GENNYALAA*
BACT.FRAG. Bacteroides fragilis GETNYALAA*
BACT.MARI. Bacteriovorax marinus AESNFAPAMAA*
BACT.SAR1.-2.PA. Bacteria SAR-1 ADNGQMAFA*
BACT.SPEC.PH.CP1639. Bacteriophage CP1639 ANDENYALAA**
BACT.THET. Bacteroides thetaiotaomicron GETNYALAA*
BART.HENS. Bartonella henselae str. Houston-1 ANDNYAEARLAA*
BART.QUIN. Bartonella quintana str. Toulouse ANDNYAEARLAA*
BDEL.BACT. Bdellovibrio bacteriovorus HD100 GNDYALAA*
BIFI.LONG. Bifidobacterium longum AKSNRTEFALAA*
BLOC.FLOR. Blochmannia floridanus AKNKYNEPVALAA*
BOLI.PACI.CL. Bolidomonas pacifica chloroplast ANNILAFNRKSLSFA*
BORD.AVIU. Bordetella avium ANDERFALAA*
BORD.BRON.AM. Bordetella bronchiseptica (ambiguous residues) ANDERXALAA*
BORD.PARA. Bordetella parapertussis ANDERFALAA*
BORD.PERT. Bordetella pertussis ANDERLALAA*
BORR.BURG. Borrelia burgdorferi AKNNNFTSSNLVMAA*
BORR.GARI. Borrelia garinii Pbi AKNNNFTSSNLVMAA*
BRAD.JAPO. Bradyrhizobium japonicum ANDNFAPVAQAA*
BREV.LINE. Brevibacterium linens AKSNNRTDFALAA*
BRUC.MELI. Brucella melitensis 16M ANDNNAQGYALAA*
BUCH.APHI.-1. Buchnera aphicola strain Sg (Schizaphis graminum) ANNKQNYALAA*
BUCH.APHI.-2. Buchnera aphicola strain APS ANNKQNYALAA*
BUCH.APHI.-3. Buchnera aphidicola strain Bp (Baizongia pistaciae) AKQNQYALAA**
BURK.CENO. Burkholderia cenocepacia strain J2315 ANDDTFALAA*
BURK.CEPA.-1. Burkholderia cepacia strain R1808 ANDDTFALAA*
BURK.CEPA.-2. Burkholderia cepacia strain R18194 ANDDTFALAA*
BURK.FUNG. Burkholderia fungorum ANDDTFALAA*
BURK.MALL. Burkholderia mallei strain ATCC 23344 ANDDTFALAA*
BURK.PSEU. Burkholderia pseudomallei ANDDTFALAA*
BURK.THAI. Burkholderia thailandensis E264 ANDDTFALAA*
CAMP.COLI.-1. Campylobacter coli strain RM2228 ANNVKFAPAYAKAA*
CAMP.COLI.-2. Campylobacter coli strain BM2509 APAYAKAA*
CAMP.FETU.-1. Campylobacter fetus APAYAKAA*
CAMP.FETU.-2. Campylobacter fetus strain 23D ANNVKFAPAYAKAA*
CAMP.JEJU. Campylobacter jejuni ANNVKFAPAYAKAA*
CAMP.LARI. Campylobacter lari RM2100 ANNVKFAPAYAKAA*
CARB.HYDR. Carboxydothermus hydrogenoformans strain Z-2901 ANENYALAA**
CAUL.CRES. Caulobacter crescentus ANDNFAEEFAVAA*
CHLA.ABOR. Chlamydophila abortus AEPKAKCEIISFSELSEQRLAA*
CHLA.MURI. Chlamydia muridarum AEPKAECEIISFADLNDLRVAA*
CHLA.PNEU. Chlamydophila pneumoniae AEPKAECEIISLFDSVEERLAA*
CHLA.PSIT. Chlamydophila psittaci AEPKAECEIISFSDLTEERLAA*
CHLA.TRAC. Chlamydia trachomatis AEPKAECEIISFADLEDLRVAA*
CHLO.AGGR. Chlorochromatium aggregatus ADDYSYAMAA*
CHLO.AURA. Chloroflexus aurantiacus ANTNTRAQARLALAA***
CHLO.TEPI. Chlorobium tepidum ADDYSYAMAA*
CHRO.SALE. Chromohalobacter salexigens strain DSM3043 ANDDNYAQGALAA*
CHRO.SPEC. Chroococcidiopsis species PCC6712 ANNIVKFERQAVFA*
CHRO.VIOL.-1. Chromobacterium violaceum strain ATCC 07461 ANDETYALAA*
CHRO.VIOL.-2. Chromobacterium violaceum strain ATCC12472 ANDETYALAA*
CITR.RODE. Citrobacter rodentium ANDENYALAA**
CLAV.MICH. Clavibacter michiganensis ANNKQSSFVLAA*
CLOS.ACET. Clostridium acetobutylicum ALKIKDNENNLALAA*
CLOS.BOTU. Clostridium botulinum ANDNFALAA**
CLOS.DIFF. Clostridium difficile ADDNFAIAA*
CLOS.PERF.-1. Clostridium perfringens strain ATCC13124 AEDNFALAA*
CLOS.PERF.-2. Clostridium perfringens strain 13 AEDNFALAA*
CLOS.PERF.-3. Clostridium perfringens ARDNFALAA*
CLOS.TETA. Clostridium tetani ADDNFVLAA*
CLOS.THER. Clostridium thermocellum ANEDNYALAAA*
COLW.PSYC. Colwellia psychrerythraea strain 34H ANDDTFALAA*
COMA.TEST. Comamonas testosteroni ANDERFALAA*
COPR.PROT. Coprothermobacter proteolyticus strain DSM 9218 AEPEFALAA*
CORY.DIPH. Corynebacterium diphtheriae AENTQRDYALAA*
CORY.EFFI. Corynebacterium efficiens AEKTQRDYALAA*
CORY.GLUT. Corynebacterium glutamicum AEKSQRDYALAA*
COXI.BURN. Coxiella burnetii ANDSNYLQEAYA*
CROC.WATS. Crocosphaera watsonii ANNIVSFKRVAVAA*
CYAN.CALD.CL. Cyanidium caldarium chloroplast ANNIIEISNIRKPALVV*
CYAN.GRAC. Cyanobium gracile ANNIVRFSRQAAPVAA*
CYAN.MERO.CL. Cyanidioschyzon merolae chloroplast LFKFKDNLKTI*
CYAN.PARA.CY. Cyanophora paradoxa cyanelle ATNIVRFNRKAAFAV**
CYTO.HUTC. Cytophaga hutchinsonii GEESYAMAA*
DECH.AGIT. Dechloromonas agitata strain CKB ANDEQFAIAA*
DECH.AROM. Dechloromonas aromatica ANDEQFAIAA*
DEHA.ETHE. Dehalococcoides ethenogenes strain 195 ANVNSFLLAK*
DEIN.RADI. Deinococcus radiodurans GNQNYALAA*
DESU.ACET. Desulfuromonas acetoxidans ADTDVSYALAA*
DESU.DESU.-1. Desulfovibrio desulfuricans ANNDYDYAYAA**
DESU.DESU.-2. Desulfovibrio desulfuricans strain G20 ANNDYEYAMAA*
DESU.HAFN. Desulfitobacterium hafniense ANDDNYALAA*
DESU.PSYC. Desulfotalea psychrophila strain LSv54 ADDYNYAVAA**
DESU.VULG. Desulfovibrio vulgaris strain Hildenborough ANNYDYALAA*
DICH.NODO. Dichelobacter nodosus ANDDNYALAA*
DICT.THER. Dictyoglomus thermophilum strain DSM 3960 ANTNLALAA*
EHRL.CANI. Ehrlichia canis ANDNFVFANDNNSSVAGLVAA*
EHRL.CHAF. Ehrlichia chaffeensis Arkansas ANDNFVFANDNNSSANLVAA*
EHRL.RUMI. Ehrlichia ruminantium strain Welgevonden ANDNFVSANDNNSTANLVAA*
EMIL.HUXL.CL. Emiliania huxleyi chloroplast ANNILNFNSKLAIA*
ENTE.AERO. Enterobacter aerogenes strain ATCC 13048 ANDENYALAA**
ENTE.CLOA. Enterobacter cloacae ANDENYALAA**
ENTE.DURA. Enterococcus durans AKNENNSYALAA*
ENTE.FAEC.-1. Enterococcus faecalis strain V583 AKNENNSFALAA*
ENTE.FAEC.-2. Enterococcus faecium AKNENNSYALAA*
ENTE.SAKA. Enterobacter sakazakii ANDENYALAA**
ERWI.CARO. Erwinia carotovora subsp. atroseptica ANDENYALAA**
ERWI.CHRY. Erwinia chrysanthemi ANDENFAPAALAA*
ERYT.LITO. Erythrobacter litoralis HTCC2594 ANDNEALALAA*
ESCH.COLI.-1. Escherichia coli K12 ANDENYALAA**
ESCH.COLI.-2. Escherichia coli strain CFT073 ANDENYALAA**
ESCH.COLI.-3. Escherichia coli O157:H7 strains EDL933 and RIMD050995 ANDENYALAA**
EWRI.AMYL. Erwinia amylovora ANDENFAPAALAA*
EXIG.SPEC. Exiguobacterium strain 255-15 GKTNTQLAAA**
FIBR.SUCC. Fibrobacter succinogenes strain S85 ADENYALAA*
FRAG.PINN.CL. Fragilaria pinnata chloroplast ANNIIPFHFKTVNFNNSNLLQFAA*
FRAN.SPEC.-1. Frankia sp. CcI3 ANKTQPTTPTYALAA*
FRAN.SPEC.-2. Frankia sp. EAN1pec ATKTQPASSTFALAA*
FRAN.TULA. Francisella tularensis ANDSNFAAVAKAA*
FREM.DIPL. Fremyella diplosiphon ANNIVKFARKEALVAA**
FUSO.NUCL.-1. Fusobacterium nucleatum ATCC 25586 GNKDYALAA*
FUSO.NUCL.-2. Fusobacterium nucleatum GNKEYALAA*
FUSO.NUCL.-3. Fusobacterium nucleatum ATCC 49256 GNKEYALAA*
GAMM.SAR1. Gammaproteobacteria SAR-1 ANNYNYSLAA*
GEMM.OBSC. Gemmata obscuriglobus strain UQM2246 AEPQYSLAA*
GEOB.KAUS. Geobacillus kaustophilus HTA426 GKQNYALAA*
GEOB.META. Geobacter metallireducens ADNYDYAVAA*
GEOB.SULF. Geobacter sulfurreducens strain PCA ADNYDYAVAA**
GIGA.PAPI.CL. Gigartina papillata chloroplast AKHQIVPFSKRIIVV*
GLOE.VIOL. Gloeobacter violaceus ATNNVVPFARARATVAA*
GLUC.OXYD. Gluconobacter oxydans 621H ANDNSEVLAVAA*
GORD.RUBR. Gordonia rubripertincta ADSNQRDYALAA*
GRAC.TENU.CL. Gracilaria tenuistipitata var. liui chloroplast AKNNILTLSRRLIYA*
GUIL.THET.CL. Guillardia theta chloroplast ASNIVSFSSKRLVSFA*
HAEM.DUCR.-1. Haemophilus ducreyi ANDEQYALAA**
HAEM.DUCR.-2. Haemophilus ducreyi strain NCTC 10945 ANDEQYALAA**
HAEM.INFL.-1. Haemophilus influenzae ANDEQYALAA**
HAEM.INFL.-2. Haemophilus influenzae strain R2866 ANDEQYALAA**
HAEM.INFL.-3. Haemophilus influenzae strain R2846 ANDEQYALAA**
HAEM.INFL.-4. Haemophilus influenzae strain 86-028NP ANDEQYALAA**
HAEM.SOMN. Haemophilus somnus ANDEQYALAA**
HELI.HEPA. Helicobacter hepaticus ANNANYAPAYAKVA*
HELI.MOBI. Heliobacillus mobilis AEDNYALAA*
HELI.MUST. Helicobacter mustelae ANNKNYAPAYAKVA*
HELI.PYLO. Helicobacter pylori VNNTDYAPAYAKAA*
HYDR.PALL. Hydrogenophaga palleronii ANDERFALAA*
HYPH.NEPT. Hyphomonas neptunium strain ATCC 15444 ANDNFAEGELLAA*
IDIO.LOIH. Idiomarina loihiensis L2TR ANDDNYALAA**
JANN.SPEC. Jannaschia sp. CCS1 ANDNRAPAMALAA*
KINE.RADI. Kineococcus radiotolerans ADSKRTEFALAA*
KLEB.AERO. Klebsiella aerogenes NTCT 9528 ANDENYALAA**
KLEB.PNEU. Klebsiella pneumoniae ANDENYALAA**
LACT.ACID. Lactobacillus acidophilus strain NCFM ANNKNSYALAA*
LACT.BREV. Lactobacillus brevis AKNNNNSYALAA**
LACT.CASE. Lactobacillus casei AKNENSYALAA**
LACT.DELB.-1. Lactobacillus delbrueckii subsp. lactis strain NCTC 662 AKNENNSYALAA*
LACT.DELB.-2. Lactobacillus delbrueckii strain ATCC BAA-365 ANENSYAVAA*
LACT.GALL. Lactobacillus gallinarum ANNKNSYALAA*
LACT.GARV. Lactococcus garvieae AKNNTSYALAA*
LACT.GASS. Lactobacillus gasseri ANNENSYAVAA*
LACT.HELV. Lactobacillus helveticus ANNKNSYALAA*
LACT.JOHN. Lactobacillus johnsonii ANNENSYAVAA*
LACT.LACT.-1. Lactococcus lactis subsp. lactis strain NCDO2118 AKNNTQTYAMAA*
LACT.LACT.-2. Lactococcus lactis subsp. lactis bv. diacetylactis strain IL1403 AKNNTQTYAMAA*
LACT.LACT.-3. Lactococcus lactis subsp. cremoris strain IL582 AKNNTQTYAMAA*
LACT.LACT.-4. Lactococcus lactis subsp. lactis strain IL2961 AKNNTQTYAMAA*
LACT.PLAN.-1. Lactobacillus plantarum strain CNRZ211 AKNNNNSYALAA**
LACT.PLAN.-2. Lactococcus plantarum strain CNRZ1322 AKNTQTYALAA*
LACT.PLAN.-3. Lactobacillus plantarum strain WCSF1 AKNNNNSYALAA**
LACT.RAFF. Lactococcus raffinolactis AKNTQTYAVAA*
LACT.SAKE. Lactobacillus sakei ANNNNSYAVAA*
LAWS.INTR. Lawsonia intracellularis ANNNYDYALAA*
LEGI.PNEU. Legionella pneumophila ANDENFAGGEAIAA**
LEIF.XYLI. Leifsonia xyli subsp. xyli strain CTCB07 ANSKSTVSAKADFALAA*
LEPT.FERR.PA. Leptospirillum ferrooxidans ANNEMALAA*
LEPT.GIII. Leptospirillum species group III ANEELALAA*
LEPT.GRII. Leptospirillum species group II ANEELALAA*
LEPT.INTE. Leptospira interrogans ANNELALAA*
LEUC.LACT. Leuconostoc lactis AKNENSFAIAA*
LEUC.MESE. Leuconostoc mesenteroides AKNENSFAIAA*
LEUC.PSEU. Leuconostoc pseudomesenteroides AKNENSYAIAA*
LIST.GRAY.-1. Listeria grayi strain NCTC 10812 GKEKQNLAFAA**
LIST.GRAY.-2. Listeria grayi strain NCTC 10815 GKQNNNLAFAA**
LIST.INNO.-1. Listeria innocua GKEKQNLAFAA**
LIST.INNO.-2. Listeria innocua strain ATCC 12210 (ATCC 12210) GKEKQNLAFAA**
LIST.IVAN. Listeria ivanovii GKEKQNLAFAA**
LIST.MONO. Listeria monocytogenes GKEKQNLAFAA**
LIST.SEEL. Listeria seeligeri GKEKQNLAFAA**
LIST.WELS. Listeria welshimeri GKEKQNLAFAA**
MAGN.MAGN.-1. Magnetospirillum magnetotacticum strain MS-1 ANDNFAPVAVAA*
MAGN.MAGN.-2. Magnetospirillum magnetotacticum strain MS-1 ANDNVELAAAA*
MAGN.MC-1. Magnetococcus MC-1 ANDEHYAPAFAAA*
MANN.HAEM. Mannheimia haemolytica ANDEQYALAA**
MANN.SUCC. Mannheimia succiniciproducens MBEL55E ANDEQYALAA**
MARI.HYDR. Marinobacter hydrocarbonoclasticus ANDENYALAA*
MESO.FLOR. Mesoplasma florum ANKNEENTNEVPTFMLNAGQANYAFA*
MESO.LOTI. Mesorhizobium loti ANDNYAEARLAA*
MESO.SPEC. Mesorhizobium species ANDNYAEARLAA*
MESO.VIRI.CL. Mesostigma viride chloroplast ANNILPFNRKTAVAV*
METH.CAPS. Methylococcus capsulatus strain Bath ANDDVYALAA*
METH.EXTO. Methylobacterium extorquens ANDNFAPVAVAA*
METH.FLAG. Methylobacillus flagellatus ANDETYALAA*
METH.GLYC. Methylobacillus glycogenes ANDETYALAA*
MICR.DEGR. Microbulbifer degradans ANDDNYGAQLAA*
MOOR.THER. Moorella thermoacetica ADDNLALAA*
MORA.CATA. Moraxella catarrhalis ANDETYALAA*
MYCO.ARTH. Mycoplasma arthridis GNLETSEDKKLDLQFVMNSQTQQNLLFA*
MYCO.AVIU.-1. Mycobacterium avium strain 104 ADSHQRDYALAA*
MYCO.AVIU.-2. Mycobacterium avium strain k10 ADSHQRDYALAA*
MYCO.BOVI. Mycobacterium bovis ADSHQRDYALAA*
MYCO.CAPR. Mycoplasma capricolum ANKNEETFEMPAFMMNNASAGANFMFA**
MYCO.CHEL. Mycobacterium chelonae ADSHQRDYALAA*
MYCO.FLAV. Mycobacterium flavescens ADSNQRDYALAA*
MYCO.GALL. Mycoplasma gallisepticum DKTSKELADENFVLNQLASNNYALNF*
MYCO.GENI.-1. Mycoplasma genitalium DKENNEVLVEPNLIINQQASVNFAFA*
MYCO.GENI.-2. Mycoplasma genitalium DKENNEVLVDPNLIINQQASVNFAFA*
MYCO.GORD. Mycobacterium gordonae ADSHQRDYALAA*
MYCO.HYOP. Mycoplasma hyopneumoniae strain 232 AKNSKKSPNEAKIDYPFLSYNQLNFAYV*
MYCO.INTR. Mycobacterium intracellulare ADSHQRDYALAA*
MYCO.KANS. Mycobacterium kansasii ADSHQRDYALAA*
MYCO.LEPR. Mycobacterium leprae ADSYQRDYALAA*
MYCO.MALM. Mycobacterium malmoense AVSTQRDYALAA*
MYCO.MARI.-1. Mycobacterium marinum ADSHQRDYALAA*
MYCO.MARI.-2. Mycobacterium marinum ADSHQRDYALAA*
MYCO.MICR.-1. Mycoplasma mycoides ADSHQRDYALAA*
MYCO.MICR.-2. Mycobacterium microti ADSHQRDYALAA*
MYCO.MOBI. Mycoplasma mobile GKEKQLEVSPLLMSSSQSNLVFA*
MYCO.MYCO. Mycoplasma mycoides ADKNEENFEMPAFMINNASAGANYMFA**
MYCO.PENE. Mycoplasma penetrans strain HF-2 AKNNKNEAVEVELNDFEINALSQNANLALYA*
MYCO.PNEU. Mycoplasma pneumoniae DKNNDEVLVDPMLIANQQASINYAFA*
MYCO.PULM. Mycoplasma pulmonis EQKNKKMTIKI**
MYCO.SCRO. Mycobacterium scrofulaceum ADSHQRDYALAA*
MYCO.SMEG. Mycobacterium smegmatis strain MC2 ADSNQRDYALAA*
MYCO.SPEC.PH.BXZ1. Mycobacteriophage bxz1 ATDTDATVTDAEIEAFFAEEAAALV*
MYCO.SZUL. Mycobacterium szulgai AENTQRDFALAA*
MYCO.TUBE.-1. Mycobacterium tuberculosis ADSHQRLAA*
MYCO.TUBE.-2. Mycobacterium tuberculosis strain 210 ADSHQRDYALAA*
MYCO.XENO. Mycobacterium xenopi ADSHQRDYALAA*
MYXO.XANT. Myxococcus xanthus strain DK 1622 ANDNVELALAA*
NEIS.GONO. Neisseria gonorrhoeae ANDETYALAA*
NEIS.LACT. Neisseria lactamica ANDETYALAA*
NEIS.MENI.-1. Neisseria meningitidis ANDETYALAA*
NEIS.MENI.-2. Neisseria meningitidis ANDETYALAA*
NEOR.SENN. Neorickettsia sennetsu strain Miyayama ANDNFEAGSAEYAVAA*
NEPH.OLIV.CL. Nephroselmis olivacea ANQILPFSRRVAVAA*
NITR.CRYO. Nitrosomonas cryotolerans ANDENYALAA*
NITR.EURO. Nitrosomonas europaea ANDENYALAA*
NITR.MULT. Nitrosospira multiformis ANDENYALAA*
NITR.OCEA. Nitrosococcus oceani ATCC 19707 ANDDNYALAA*
NITR.WINO. Nitrobacter winogradskyi ANDNYAPVAQAA*
NOCA.ASTE.-1. Nocardia asteroides 1 ADSNQRDYALAA*
NOCA.ASTE.-2. Nocardia asteroides 2 ADSNQRDYALAA*
NOCA.FARC. Nocardia farcinica ADSHQREYALAA*
NOST.PUNC. Nostoc punctiforme ANNIVNFARKDALVAA*
OCEA.IHEY. Oceanobacillus iheyensis GKETNQPVLAAA*
ODON.SINE.CL. Odontella sinensis chloroplast ANNLISSVFKSLSTKQNSLNLSFAV*
OENO.OENI. Oenococcus oeni AKNNEPSYALAA*
OSCI.SANC. Oscillatoria sancta ANNIVPFARKQVAVA*
OSCI.SPEC. Oscillatoria species PCC6304 ANNIVPFARKAAPVAA*
PAEN.LARV. Paenibacillus larvae GKQQNNYALAA**
PAEN.MACE. Paenibacillus macerans strain NRS277 GKQQNNFALAA**
PANT.STEW. Pantoea stewartii strain DC283 ANDENYALAA**
PARA.DENI. Paracoccus denitrificans strain 1222 ANDNRAPVALAA*
PARA.UWE2. Parachlamydia UWE25 (host: Acanthamoeba sp.) ANNSNKIAKVDFQEGTFARAA*
PAST.MULT. Pasteurella multocida ANDEQYALAA**
PAVL.LUTH.CL.PA. Pavlova lutheri chloroplast (partial sequence) ANNILSFNRVAVAPYSYIALTPYGQKI*
PEDI.PENT. Pediococcus pentosaceus AKNNNNSYALAA***
PHOT.ASYM. Photorhabdus asymbiotica ANDNEYALVA**
PHOT.LUMI. Photorhabdus luminescens ANDEKYALAA**
PHOT.PHOS. Photobacterium phosphoreum ANDENYALAA*
PHOT.PROF. Photobacterium profundum strain SS9 ANDENFALAA**
PHYT.ASTE. Phytoplasma asteris (Onion yellows phytoplasma OY-M) GNNKQTVTNTQDFAGQTPVYQMNFANSFSSQLAFA*
PLEC.BORY. Plectonema boryanum ANNIVPFARKTAPVAA*
POLA.SPEC. Polaromonas species JS666 ANDERFALAA**
PORP.GING. Porphyromonas gingivalis GENNYALAA*
PORP.PURP.CL. Porphyra purpurea chloroplast AENNIIAFSRKLAVA*
PREV.INTE. Prevotella intermedia strain 17 GENNYALAA*
PREV.RUMI. Prevotella ruminicola strain 23 GNNEYALAA*
PREV.RUMI. Prevotella ruminicola strain 23 GESNYAMAA
PRIO.LANC.CL. Prionitis lanceolata chloroplast AKHQILPLSRKIALA*
PROC.MARI.-1. Prochlorococcus marinus MED4 ANKIVSFSRQTAPVAA*
PROC.MARI.-2. Prochlorococcus marinus MIT9313 ANNIVRFSRQPALVAA*
PROC.MARI.-3. Prochlorococcus marinus strain SS120 ANKIVSFSRQTAPVAA*
PROP.ACNE.-1. Propionibacterium acnes strain KPA171202 AENTRTDFALAA*
PROP.ACNE.-2. Propionibacterium acnes AENTRTDFALAA*
PROT.SAR1.-1. Proteobacteria SAR-1 GENADYALAA*
PROT.SAR1.-2. Proteobacteria SAR-1 ANNYNYSLAA*
PROT.SAR1.-3. Proteobacteria SAR-1 ADNGYMAAA*
PROT.VULG. Proteus vulgaris strain ATCC 13315 ANDNQYEALAA**
PROV.RETT. Providencia rettgeri ANDENYALAA**
PRYM.PARV.CL. Prymnesium parvum chloroplast ANNILSFNTKLALA*
PSEU.AERU. Pseudomonas aeruginosa ANDDNYALAA*
PSEU.CHLO. Pseudomonas chlororaphis strain 30-84 ANDETYGEYALAA*
PSEU.FLUO.-1. Pseudomonas fluorescens Strain Pf0-1 ANDDQYGAALAA*
PSEU.FLUO.-2. Pseudomonas fluorescens SBW25 ANDENYGQEFALAA*
PSEU.FLUO.-3. Pseudomonas fluorescens strain Pf-5 ANDETYGDYALAA*
PSEU.FLUO.-4. Pseudomonas fluorescens strain ATCC 17400 ANDETYGEYALAA*
PSEU.HALO. Pseudoalteromonas haloplanktis ANDDNYSLAA*
PSEU.PUTI.-1. Pseudomonas putida ANDENYGAEYKLAA*
PSEU.PUTI.-2. Pseudomonas putida strain ATCC 12633 (ATCC 12633) ANDETYGEETYALAA*
PSEU.SYRI.-1. Pseudomonas syringae strain DC3000 ANDENYGAQLAA*
PSEU.SYRI.-2. Pseudomonas syringae ANDETYGEYALAA*
PSEU.SYRI.-3. Pseudomonas syringae pathovar phaseolicola strain 1448A ANDENYGAQLAA*
PSYC.273-. Psychrobacter 273-4 ANDENYALAA*
PSYC.URAT. Psychrobacter urativorans ANDENYALAA*
PYLA.LITT.CL. Pylaiella littoralis chloroplast ANNIMSFNKNQVFA*
RALS.EUTR. Ralstonia eutropha ANDERYALAA*
RALS.META. Ralstonia metallidurans ANDERYALAA*
RALS.PICK. Ralstonia pickettii ANDERYALAA*
RALS.SOLA. Ralstonia solanacearum ANDNRYQLAA*
RHIZ.LEGU. Rhizobium leguminosarum bv. viciae 3841 ANDNYAEARLAA*
RHOD.BALT. Rhodopirellula baltica AEENFALAA*
RHOD.EQUI. Rhodococcus equi strain X AESTQREYALAA*
RHOD.MARI.CL. Rhodosorus marinus chloroplast ANNILKFFTKSPVVAFA*
RHOD.PALU. Rhodopseudomonas palustris ANDNYAPVAQAA*
RHOD.RUBR. Rhodospirillum rubrum ANDNVELAAAA*
RHOD.SALI.CL. Rhodomonas salina chloroplast ANNIVPFSRKVALV*
RHOD.SPHA. Rhodobacter sphaeroides ANDNRAPVALAA*
RICK.AKAR. Rickettsia akari str. Hartford ANDNNRSVDLALAA*
RICK.CONO.-1. Rickettsia conorii strain Malish 7 ANDNNRSVGHLALAA*
RICK.PROW. Rickettsia prowazekii ANDNRYVGVPALAAA*
RICK.RICK. Rickettsia rickettsii ANDNNRSVGRLALAA*
RICK.TYPH. Rickettsia typhi ANDNKRYVGVAALAAA*
RUBR.GELA. Rubrivivax gelatinosus strain PM1 ANDERFALAA*
RUBR.XYLA. Rubrobacter xylanophilus ANDREMALAA*
RUMI.ALBU. Ruminococcus albus strain 8 AYVLKLGGHGYFAKAS*
SALI.RUBE. Salinibacter ruber strain DSMZ 13855 ADDYSYAMAA*
SALM.BONG. Salmonella bongori ANDENYALAA**
SALM.ENTE.-1. Salmonella enterica serovars Enteritidis and Dublin ANDETYALAA**
SALM.ENTE.-2. Salmonella enterica subsp. Arizonae ANDENYALAA**
SALM.ENTE.-3. Salmonella enterica subsp. Diarizonae ANDETYALAA**
SALM.ENTE.-4. Salmonella enterica serovar Choleraesuis str. SC-B67 ANDENYALAA**
SALM.PARA. Salmonella paratyphi strains A and B ANDENYALAA**
SALM.TYPH.-1. Salmonella typhimurium ANDETYALAA**
SALM.TYPH.-2. Salmonella typhi ANDETYALAA**
SERR.MARC.-1. Serratia marcescens strain BH ANDENYALAA*
SERR.MARC.-2. Serratia marcescens strain Db11 ANDENYALAA*
SHEW.DENI. Shewanella denitrificans OS-217 ANDSNYSLAA*
SHEW.PUTR.-1. Shewanella putrefaciens ANDDNYALAA*
SHEW.PUTR.-2. Shewanella putrefaciens CN-32 ANDDNYALAA*
SHEW.SAR1.-1. Shewanella SAR-1 ANDDNYALAA*
SHEW.SAR1.-2. Shewanella SAR-1 ANNDNYALAA*
SHEW.SAR2.-1. Shewanella SAR-2 ANDDNYALAA*
SHEW.SAR2.-2. Shewanella SAR-2 ADYGYMAAA*
SHEW.SPEC. Shewanella species PV-4 ANDDNYALAA*
SHIG.DYSE. Shigella dysenteriae strain M131649 ANDENYALAA**
SHIG.FLEX. Shigella flexneri ANDENYALAA**
SILI.POME. Silicibacter pomeroyi DSS-3 ANDNRAPVALAA*
SINO.MELI. Sinorhizobium meliloti strain 2011 ANDNYAEARLAA*
SKEL.COST.CL. Skeletonema costatum chloroplast ANNIMSFIFKTVTPKNHLNVLSFAV*
SPHI.ALAS. Sphingopyxis alaskensis RB2256 ANDNEALALAA*
SPHI.AROM. Sphingomonas aromaticivorans ANDNEALALAA*
SPHI.ELOD. Sphingomonas elodea ANDNEALAIAA*
SPIR.KUNK. Spiroplasma kunkelii ASKKQKEDKIEMPAFMMNNQLAVSMLAA*
STAP.AURE.-1. Staphylococcus aureus strains COL and NCTC8325 GKSNNNFAVAA*
STAP.AURE.-2. Staphylococcus aureus strain EMRSA-16 GKSNNNFAVAA*
STAP.AURE.-3. Staphylococcus aureus strain MSSA 476 GKSNNNFAVAA*
STAP.AURE.-4. Staphylococcus aureus strains Mu50 and N315 GKSNNNFAVAA*
STAP.AURE.-5. Staphylococcus aureus sbsp. aureus MW2 GKSNNNFAVAA*
STAP.EPID. Staphylococcus epidermidis DKSNNNFAVAA**
STAP.SAPR. Staphylococcus saprophyticus GKENNNFAVAA**
STAP.XYLO. Staphylococcus xylosus GKENNNFAVAA**
STEN.MALT. Stenotrophomonas maltophilia ANDDNYALAA*
STRE.AGAL.-1. Streptococcus agalactiae strain A909 AKNTNSYALAA*
STRE.AGAL.-2. Streptococcus agalactiae strain NEM316 AKNTNSYALAA*
STRE.AURE. Streptomyces aureofaciens ANSKRDSQQFALAA**
STRE.AVER. Streptomyces avermitilis ANTKSDSQSFALAA**
STRE.COEL. Streptomyces coelicolor ANTKRDSSQQAFALAA*
STRE.COLL. Streptomyces collinus ANTKRDSSSFALAA*
STRE.EQUI. Streptococcus equi AKNNTTYALAA*
STRE.GORD. Streptococcus gordonii strain Challis NCTC7868 AKNNTSYALAA*
STRE.MITI. Streptococcus mitis strain NCTC 12261 AKNNTSYALAA*
STRE.MUTA. Streptococcus mutans strain UA159 AKNTNSYAVAA*
STRE.PNEU. Streptococcus pneumoniae strain 670 AKNNTSYALAA*
STRE.PYOG. Streptococcus pyogenes AKNTNSYALAA*
STRE.SOBR. Streptococcus sobrinus strain 6715 AKNTNSYAVAA*
STRE.SUIS.-1.PA. Streptococcus suis (partial sequence) AKNTNTYALAA**
STRE.SUIS.-2. Streptococcus suis strain 89/1591 AKNTNTYALAA**
STRE.THER.-1. Streptococcus thermophilus strain CNRZ1358 AKNTNSYAVAA*
STRE.THER.-2. Streptococcus thermophilus strain LMD-9 AKNTNSYAVAA*
STRE.THER.-3. Streptococcus thermophilus strains CNRZ1066 and LMG 18311 AKNTNSYAVAA*
STRE.UBER. Streptococcus uberis AKNTNSYALAA*
STRE.ZOOE. Streptococcus zooepidemicus AKNNTTYALAA*
SULF.AZOR. Sulfurihydrogenibium azorense Az-Ful IPEREIALAA*
SYNE.SPEC.-1. Synechocystis sp. PCC6803 ANNIVSFKRVAIAA*
SYNE.SPEC.-2. Synechococcus sp. PCC6301 ANNIVPFARKAAPVAA*
SYNE.SPEC.-3. Synechococcus sp. PCC6307 ANNIVRFSRQAAPVAA*
SYNE.SPEC.-4. Synechococcus sp. WH8102 ANNIVRFSRHAAPVAA*
SYNE.SPEC.-5. Synechococcus sp. PCC7009 ANNIVRFSRQAAPVAA*
SYNE.SPEC.-6. Synechococcus sp. PCC6904 ANNIVRFSRQAAPVAA*
SYNE.SPEC.-7. Synechococcus species CC9311 ANNIVRFSRQAAPVAA*
THAL.PSEU.CL. Thalassiosira pseudonana chloroplast ANNIMPFMFNVVKTNRSLTTLNFAV*
THAL.WEIS.CL. Thalassiosira weissflogii chloroplast ANNIIPFIFKAVKTKKEAMALNFAV*
THER.COMM. Thermodesulfobacterium commune strain DSM 2178 ANEYAYALAA*
THER.ELON. Thermosynechococcus elongatus ANNIVPFARKAAAVA*
THER.FUSC. Thermobifida fusca ANSKRTEFALAA*
THER.MARI. Thermotoga maritima ANEPVAVAA**
THER.NEAP. Thermotoga neapolitana strain DSM 4359 ANEPVAVAA**
THER.ROSE. Thermomicrobium roseum strain DSM 5159 GERELALAA*
THER.TENG. Thermoanaerobacter tengcongensis ADRELAYAA*
THER.THER. Thermus thermophilus ANTNYALAA**
THIO.DENI. Thiobacillus denitrificans ANDENYALAA*
TREM.PRIN.-1. Tremblaya princeps 1 APSNRFTIVANDCIDALVRRAVV*
TREM.PRIN.-2. Tremblaya princeps 2 APSNRFTMVANDRTFALVGRAAV*
TREM.PRIN.-3. Tremblaya princeps 3 APRNRFTMVANDSMFALAGRAAV*
TREM.PRIN.-4. Tremblaya princeps 4 ATSNRFAMVANDCQFALVGRAAV*
TREM.PRIN.-5. Tremblaya princeps 5 APRNRFTRVTNDSKFALVGRAAV*
TREM.PRIN.-6. Tremblaya princeps 6 APSKRFTMVTNDSKFALVGRAAV*
TREP.DENT. Treponema denticola AENNDSFDYALAA*
TREP.PALL. Treponema pallidum ANSDSFDYALAA*
TRIC.ERYT. Trichodesmium erythraeum ANNIVPFARKQVAALA*
TROP.WHIP. Tropheryma whipplei ANLKRTDLSLAA*
UNCU.AED1. Uncultured bacterium aedes1 ANDERFALAA*
UNCU.BON2.PA. Uncultured bacterium bone2 ANDNRAPMAMAA*
UNCU.BON3. Uncultured bacterium bone3 ANDETYALAA*
UNCU.CION. Uncultured bacterium ciona1 ATLTTTGSANDEFFDARLRA*
UNCU.CRE1. Uncultured bacterium c_remanei1 ANDESYALAA*
UNCU.FAR1. Uncultured bacterium farm1 ANDNYAPVAQAA*
UNCU.FAR2. Uncultured bacterium farm2 ANNTQFAYAA*
UNCU.FAR3. Uncultured bacterium farm3 GETRFALAA*
UNCU.FAR4. Uncultured bacterium farm4 ANDNEALALAA*
UNCU.FAR5. Uncultured bacterium farm5 ANDNEALAIAA*
UNCU.FAR7. Uncultured bacterium farm7 ANDETYALAA*
UNCU.FAR8. Uncultured bacterium farm8 AKSNRTEFALAA*
UNCU.FLA1.PA. Uncultured bacterium flatworm1 ANDDNYGAQLAA*
UNCU.FS-1. Uncultured FS1 ANXETYALAA**
UNCU.FS-2. Uncultured FS2 ANDENYALAA**
UNCU.HOO2. Uncultured bacterium hookworm2 ADNKRTDFALAA*
UNCU.HUM3. Uncultured bacterium human3 ANKPAALAA**
UNCU.HUM4.PA. Uncultured bacterium human4 GKENKKEDYSLLMNASTQSNLAFAF*
UNCU.HUM5.PA. Uncultured bacterium human5 GKENKKEDYSLLMNASTQSNLAFAF*
UNCU.HUM6.PA. Uncultured bacterium human6 GKENKKEDYSLLMNASTQSNLAFAF*
UNCU.LEM1. Uncultured LEM1 ANDETYALAA**
UNCU.LEM2. Uncultured LEM2 RNDETHALAA*
UNCU.MAR1. Uncultured marine gamma proteobacterium EBAC20E09 ANNDNYALAA*
UNCU.POL1.PA. Uncultured bacterium pollen1 ANDNSYALAA*
UNCU.QL-1. Uncultured QL1 ANVENYALAA**
UNCU.RCA1. Uncultured RCA1 ANDENYALAA*
UNCU.RCA2. Uncultured RCA2 SNDENYALAA**
UNCU.RCA3. Uncultured RCA3 ANDENYALAA**
UNCU.RCA4. Uncultured RCA4 ANDETYALAA**
UNCU.RCA7. Uncultured RCA7 ANDETYALAA**
UNCU.RCA8. Uncultured RCA8 ANDETYALAA**
UNCU.RIC2. Uncultured bacterium rice2 ANDERFALAA*
UNCU.RIC4. Uncultured bacterium rice4 ANDDNYALAA*
UNCU.ROO1.PA. Uncultured bacterium root1 ANDERFALAA*
UNCU.STR1. Uncultured bacterium stronglyoides1 ANDERFALAA*
UNCU.TOX1.PA. Uncultured bacterium Toxoplasma2 GKENKKEDYSLLMNASTQSNLAFAF*
UNCU.TOX2.PA. Uncultured bacterium Toxoplasma1 GKENKKEDYSLLMNASTQSNLAFAF*
UNCU.U01A. Uncultured U01a ANDSNYALAA*
UNCU.U01B. Uncultured U01b ANDSNYALAA*
UNCU.U02-. Uncultured U02 ANDEQFALAA*
UNCU.U04-.PA. Uncultured U04 (partial sequence) ANDETYALAA*
UNCU.VLS1.-1. Uncultured VLS1 ANDENYALAA**
UNCU.VLS1.-3. Uncultured VLS11 ANDENYALAA**
UNCU.VLS1.-4. Uncultured VLS13 ANDENYALAA**
UNCU.VLS3. Uncultured VLS3 ANDENYALAA**
UNCU.VLS4. Uncultured VLS4 ANDENYALAA**
UNCU.VLS5. Uncultured VLS5 ANDETYALAA**
UNCU.VLS6. Uncultured VLS6 ANDENYALAA**
UNCU.VLS7. Uncultured VLS7 ANDENYALAA**
UNCU.VLS8. Uncultured VLS8 ANDENYALAA**
UNCU.VLS9. Uncultured VLS9 ANDENYALAA*
UNCU.VLW1. Uncultured VLW1 ANDENYALAA**
UNCU.VLW2. Uncultured VLW2 ANDENYALAA**
UNCU.VLW3. Uncultured VLW3 ANDENYALAA**
UNCU.VLW4. Uncultured VLW4 ANDENYALAA**
UNCU.VLW5. Uncultured VLW5 ANDENYALAA**
UNCU.VLW6. Uncultured VLW6 ANDENYALAA**
UNCU.WEE1.PA. Uncultured bacterium weevil1 ANDSQYESAVLAA*
UNCU.WHA1. Uncultured bacterium whale1 ANDDNYALAA
UNCU.WHA2. Uncultured bacterium whale2 ANDNRAPVALAA*
UNCU.WHA3. Uncultured whale3 ANDNTEALAVAA*
UNCU.WHA4. Uncultured bacterium whale4 ANDNFAEEVRLAA*
UNCU.WHA5.PA. Uncultured whale5 ANDNYAEARLA
UNCU.WHA6. Uncultured bacterium whale6 ANDNYAEARLAA*
UNCU.WW-1. Uncultured WW1 ANDENYALAA**
UNCU.WW10. Uncultured WW10 ANDENYALAV**
UNCU.WW11. Uncultured WW11 ANDDNYALAA*
UNCU.WW-2. Uncultured WW2 ANDENYALAA**
UNCU.WW-3. Uncultured WW3 ANDENYALAA**
UNCU.WW-4. Uncultured WW4 ANDGNYALAA**
UNCU.WW-5. Uncultured WW5 ANDENYALAA**
UNCU.WW-6. Uncultured WW6 ANDENYALAA**
UNCU.WW-7. Uncultured WW7 ANDENCALAA**
UNCU.WW-8. Uncultured WW8 ANDENYALAA**
UNCU.WW-9. Uncultured WW9 ANDENYALAA**
UREA.UREA. Ureaplasma urealyticum AENKKSSEVELNPAFMASATNANYAFAY*
VARI.PARA. Variovorax paradoxus ANDERFALAA*
VERR.SPIN. Verrucomicrobium spinosum DSM4136 ANSNELALAA*
VIBR.CHOL. Vibrio cholerae ANDENYALAA*
VIBR.FISC. Vibrio fischeri ANDENYALAA**
VIBR.PARA. Vibrio parahaemolyticus RIMD 2210633 ANDENYALAA*
VIBR.VULN. Vibrio vulnificus ANDENYALAA**
WIGG.BREV. Wigglesworthia brevipalpis AKHKYNEPALLAA*
WOLB.SPEC.-1. Wolbachia pipientis (species wMel) endosymbiont of Drosophila melanogaster ANDNFAAEDNVDAIAA*
WOLB.SPEC.-2. Wolbachia species endosymbiont of Brugia malayi (nematode) ANDNFAAEGDVAVAA*
WOLB.SPEC.-3. Wolbachia pipientis endosymbiont of Culex quinquefasciatus ANDNFAAEDNVALAA*
WOLI.SUCC. Wolinella succinogenes ANNANYAPAYAKAA*
XANT.AXON. Xanthomonas axonpodis ANDDNYGSDFAIAA*
XANT.CAMP. Xanthomonas campestris ANDDNYGSDFAIAA*
XANT.ORYZ. Xanthomonas oryzae pv. oryzae KACC10331 ANDDNYGSDFAIAA*
XYLE.FAST.-1. Xylella fastidiosa strain 9a5c ANEDNFAVAA*
XYLE.FAST.-2. Xylella fastidiosa Dixon Strain ANEDNFALAA*
XYLE.FAST.-3. Xylella fastidiosa Ann-1 Strain ANEDNFAIAA*
XYLE.FAST.-4. Xylella fastidiosa strain Temecula1 (Temecula1) ANEDNFALAA*
YERS.ENTE. Yersinia entericolitica ANDSQYESAALAA*
YERS.PEST. Yersinia pestis ANDENYALAA**

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