Dr. Covadonga R. Arias

Professor
334-844-9215
ariascr@auburn.edu

Field of Specialization
Microbial Genomics

  • Professional Affiliations
  • Special Honors & Awards
  • Research
  • Publications

2000 to present, Member of the American Society for Microbiology
2002 to present, Member of the American Fisheries Society
2002 to present, Member of the Alabama Fisheries Association
2003 to present, Member of the World Aquaculture Society

2004, Recipient of a New Faculty Scholar Award given by the Biggio Center (Auburn University)
2000-2001, Post-doctoral fellowship from the European NATO agency, €25,000.
1999, Extraordinary Doctorate Award from the University of Valencia, Spain, to the best Ph.D. thesis in Microbiology.

Catfish farmers continue to identify disease as the main problem for their industry. My research focuses on Microbial diagnosis of bacterial catfish pathogens: detection and molecular epidemiology Identification and characterization of genes associated with virulence in catfish pathogens. Analysis of microbial communities in aquaculture setting.
A second area of research is related to food safety in oysters.

We are currently working on:

1. Vibrio vulnificus coldshock response under refrigeration conditions
2. Evaluating the efficiency of postharvest treatments in oysters

Title Journal Year
First record of the fish pathogen Flavobacterium columnare genomovar II from bluegill, Lepomis macrochirus (Rafinesque), with observations on associated lesions Journal of Fish Diseases 2013
Effective reduction of Vibrio vulnificus in the Eastern oyster (Crassostrea virginica) using high salinity depuration Food Microbiology 2013
Effects of ploidy and gear on the performance of cultured oysters, Crassostrea virginica: Survival, growth, shape, condition index and Vibrio abundances Aquaculture 2013
Prevalence and Population Structure of Vibrio vulnificus on Fishes from the Northern Gulf of Mexico Applied and Environmental Microbiology 2012
Catfish hybrid Ictalurus punctatus × I. furcatus exhibits higher resistance to columnaris disease than the parental species DISEASES OF AQUATIC ORGANISMS 2012
Molecules infer origins of ectoparasite infrapopulations on tuna Parasitology International 2011
Adhesion dynamics of Flavobacterium columnare to channel catfish Ictalurus punctatus and zebrafish Danio rerio after immersion challenge DISEASES OF AQUATIC ORGANISMS 2011
Scanning Electron Microscopy of “Saddleback” Lesions Associated with Experimental Infections of Flavobacterium columnare in Channel Catfish, Ictalurus punctatus (Siluriformes: Ictaluridae), and Zebrafish, Danio rerio (Cypriniformes: Cyprinidae) JOURNAL OF THE WORLD AQUACULTURE SOCIETY 2011
High Numbers of Vibrio vulnificus in Tar Balls Collected from Oiled Areas of the North-Central Gulf of Mexico Following the 2010 BP Deepwater Horizon Oil Spill EcoHealth 2011
Cloning, Expression, and Immunogenicity of Flavobacterium columnare Heat Shock Protein DnaJ Journal of Aquatic Animal Health 2010
In vivo gene expression of cold shock and other stress-related genes in Vibrio vulnificus during shellstock temperature control conditions in oysters Journal of Applied Microbiology 2009
Bacterial loads and microbial composition in high pressure treated oysters during storage International Journal of Food Microbiology 2009
Use of Modified Live Vaccines in Aquaculture Journal of the World Aquaculture Society 2009
Flavobacterium columnare genomovar influences mortality in channel catfish (Ictalurus punctatus) Veterinary Microbiology 2008
Gene Expression of Cold Shock and Other Stress-Related Genes in Vibrio vulnificus Grown in Pure Culture under Shellstock Temperature Control Conditions Journal of Food Protection 2008
Use of suppressive subtractive hybridization to identify Flavobacterium columnare DNA sequences not shared with Flavobacterium johnsoniae Letters in Applied Microbiology 2008
Molecular typing of Streptococcus agalactiae isolates from fish Journal of Fish Disease 2008
First Report of Yersinia ruckeri Biotype 2 in the USA Journal of Aquatic Animal Health 2007
Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis BMC Genomics 2007
Molecular typing of isolates of the Federation of European Microbiological Societies Letters 2007
Identification and characterization of an intervening sequence within the 23S ribosomal RNA genes of Edwardsiella ictaluri Systematic and Applied Microbiology 2007
Host-specific association between Flavobacterium columnare genomovars and fish species Systematic and Applied Microbiology 2007
Combined use of 16S ribosomal DNA and automated ribosomal intergenic spacer analysis to study the bacterial community in catfish ponds Letters in Applied Microbiology 2006
Intra- and interspecific phenotypic characteristics of fish-pathogenic Edwardsiella ictaluri and E. tarda Aquacultural Research 2006
Comparison of lipopolysaccharide and protein profiles between Flavobacterium columnare strains from different genomovars Journal of Fish Diseases 2006
Technique for Identifying Flavobacterium columnare Using Whole-Cell Fatty Acid Profiles Journal of Aquatic Animal Health 2005
Isolation and characterization of strains of Flavobacterium columnare from Brazil Journal of Fish Diseases 2005
Protoplast transformation and regeneration of transgenic Valencia sweet orange plants containing a juice quality-related pectin methylesterase gene Plant Cell Reproduction 2005
Transmission and detection of Flavobacterium columnare in channel catfish, Ictalurus punctatus Diseases of Aquatic Organisms 2005
Genetic fingerprinting of Flavobacterium columnare isolates from cultured fish Journal of Applied Microbiology 2004
Isolation of Edwardsiella ictaluri from Tadpole Madtom in a Southwestern New Jersey River Journal of Aquatic Animal Health 2003
A comparative study of Edwardsiella ictaluri parent (EILO) and E. ictaluri rifampicin-mutant (RE-33) isolates using lipopolysaccharides, outer membrane proteins, fatty acids, Biolog, API 20E and genomic analyses Journal of Fish Diseases 2003
Coronatine and Abscission Citrus Journal of the American Society for Horticulture Science 2003
Yeast Species Associated with Orange Juice: Evaluation of Different Identification Methods Applied and Environmental Microbiology 2002
A Pectinmethylesterase Gene Associated with a Heat-Stable Extract from Citrus Journal of Agricultural and Food Chemistry 2002
Identification of Vibrio spp. (other than 11. vulnificus) recovered on CPC agar from marine natural samples International Microbiology 2000
Low incidence of Vibrio vulnificus among Vibrio isolates from seas water and shellfish of the western Mediterranean coast Journal of Applied Microbiology 1999
In situ analysis of the bacterial communities associated to farmed eel by whole-cell hybridization Letters in Applied Microbiology 1999
Genetic Relatedness among Environmental, Clinical, and Diseased-Eel Vibrio vulnificus Isolates from Different Geographic Regions by Ribotyping and Randomly Amplified Polymorphic DNA PCR Applied and Environmental Microbiology 1998
A Comparison of Strategies for the Detection and Recovery of Vibrio vulnificus from Marine Samples of the Western Mediterranean coast Systematic and Applied Microbiology 1998
Intraspecific Differentiation of Vibrio vulnificus Biotypes by Amplified Fragment Length Polymorphism and Ribotyping Applied and Environmental Microbiology 1997
A Polyphasic Approach to Study the Intraspecific Diversity Amongst Vibrio vulnificus Isolates Systematic and Applied Microbiology 1997
Nested PCR Method for Rapid and Sensitive Detection of Vibrio vulnificus in Fish, Sediments, and Water Applied and Environmental Microbiology 1995

43 Records Total

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