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Auburn University
 

Contact Information

Zhanjiang Liu
Alumni Professor

(334)-844-4054
liuzhan@auburn.edu

Field of Specialization
Genetics





 



  • Professional Affiliations
  • Special Honors & Awards
  • Research
  • Publications

  1. Editorial Board, Reviews in Aquaculture, 2007
  2. Editorial Board, Animal Biotechnology, 2007
  3. North American Editor, Marine Biotechnology, 2004 - present
  4. Editorial Board, Aquaculture, 2004 - present
  5. Aquaculture Coordinator, National Animal Genome Project NRSP-8, 2003-2008
  6. Scientific Advisory Board, Oceans and Human Health Initiative, NOAA.
  7. Steering Committee, International Network on Genetics in Aquaculture
  8. Panel Chair, Porcine Genome Sequencing
  9. Adviser, National Agricultural Hi-tech Industries, China.
  10. Adjunct professor, Shanghai Fisheries University, Shanghai, China.I
  11. International Director, Aquaculture Education Center of Ministry of Education, China.
  12. International Director, Key Laboratory of Aquaculture Systems and Molecular Ecology of the Ministry of Agriculture, China.
  13. International Scientific Advisor, Chinese Academy of Fisheries Sciences.
  14. Director, Sino-American Functional Genomics Laboratory, Qingdao, China.
  15. Advisory Panel Member, Genome Research on All Salmonids (cGRASP), Canada. 
  16. Reviews for over 40 professional Journals.
  17. Grant Review Panel members for numerous USDA, NIH, NOAA, and SeaGrant.
  18. Panel members for numerous national and international functions.
  19. Conference organizers for Plant and Animal Genome, and World Aquaculture Society sessions.

  • Creative Research and Scholarship Award, Auburn University - 2007
  • Alabama Agricultural Experiment Station Director's Outstanding Research Award - 2007.
  • Golden Summit Award from the Governor, Sichuan Province, China in recognition of “enthusiastic support to economic construction and social progress in Sichuan Province, and prominent contributions to international exchange and friendly cooperation between Sichuan and foreign countries, 2003.
  • Alumni Professorship, Auburn University, 2002-2007.
  • Research exhibited on Capitol Hill, 2000, sponsored by NASULGC.
  • Distinguished Research Award by Alabama Catfish Producers in recognition of outstanding research contributions and dedication to Alabama’s catfish industry.

  • My major research interests are in genome research of catfish including major projects of:

    1.  Development of molecular markers;
    2.  Genetic linkage mapping;
    3 . QTL mapping;  
    4 .  Transcriptome analysis including gene discovery of 25,000 catfish genes, EST sequencing, gene indexing, and gene ontology studies;
    5.  Physical mapping;
    6.  Development of microarray technologies;
    7.  Comparative mapping; and
    8.  Bioinformatics.


    Title Journal Year
    Microarray analysis of gene expression in the blue catfish liver reveals early activation of the MHC class I pathway after infection with Edwardsiella ictaluri  Molecular Immunology  2008 
    The warm temperature acclimation protein Wap65 as an immune response gene: Its duplicates are differentially regulated by temperature and bacterial infections  Molecular Immunology  2008 
    Characterization, polymorphism assessment, and database construction for microsatellites from BAC end sequences of channel catfish (Ictalurus punctatus): A resource for integration of linkage and physical maps  Aquaculture  2008 
    Assessing genetic diversity of populations of topmouth culter (Culter alburnus) in China using AFLP markers  Biochemical Systematics and Ecology  2007 
    Generation and analysis of ESTs from the eastern oyster, Crassostrea virginica Gmelin and identification of microsatellite and SNP markers  BMC Genomics  2007 
    Repeat structure of the catfish genome: a genomic and transcriptomic assessment of Tc1-like transposon elements in channel catfish (Ictalurus punctatus)  Genetica  2007 
    Towards the ictalurid catfish transcriptome: generation and analysis of 31,215 catfish ESTs  BMC Genomics  2007 
    Structural characterisation and expression analysis of Toll-like receptor 2 gene from catfish  Fish and Shellfish Immunology  2007 
    A BAC-based physical map of the channel catfish genome  Genomics  2007 
    Evolution of CC chemokines in teleost fish: a case study in gene duplication and implications for immune diversity  Immunogenetics  2007 
    Divergent Toll-like receptors in catfish (Ictalurus punctatus): TLR5S, TLR20, TLR21   Fish and Shellfish Immunology  2007 
    Expression analysis of the acute phase response in channel catfish (Ictalurus punctatus) after infection with a Gram-negative bacterium  Developmental and Comparative Immunology  2007 
    A cDNA Microarray for Crassostrea virginica and C. gigas  Marine Biotechnology  2007 
    Aquaculture Genome Technologies  Book ( editied )  2007 
    Characterization of a BAC Library from Channel Catfish Ictalurus punctatus : Indications of High Levels of Chromosomal Reshuffling Among Teleost Genomes   Marine Biotechnology  2007 
    Characterization of a NK-lysin antimicrobial  Fish and Shellfish Immunology  2006 
    Major Histocompatibility Complex Class IIB Allele Polymorphism and Its Association with Resistance/Susceptibility to Vibrio anguillarum in Japanese Flounder (Paralichthys olivaceus)  Marine Biotechnology  2006 
    Transgenic Fish - Where We Are and Where Do We Go?  The Israeli Journal of Aquaculture Bamidgeh  2006 
    Transcriptome Characterization Through the Generation and Analysis of Expressed Sequence Tags: Factors to Consider for a Successful EST Project  The Israeli Journal of Aqaculture Bamidgeh  2006 
    Characterization of 23 CC chemokine genes and analysis of their expression in channel catfish (Ictalurus punctatus)  Developmental and Comparative Immunology  2006 
    Combined use of 16S ribosomal DNA and automated ribosomal intergenic spacer analysis to study the bacterial community in catfish ponds  Letters in Applied Microbiology  2006 
    The catfish liver-expressed antimicrobial peptide 2 (LEAP-2) gene is expressed in a wide range of tissues and developmentally regulated  Molecular Immunology  2006 
    Molecular systematics of bisexual Artemia populations  Aquacultural Research  2006 
    Catfish CC chemokines: genomic clustering, duplications, and expression after bacterial infection with Edwardsiella ictaluri  Molecular Genetic Genomics  2006 
    Comparison of domestic and wild channel catfish (Ictalurus punctatus) populations provides no evidence for genetic impact  Aquaculture  2006 
    Toll-like receptor 3 and TICAM genes in catfish: species-specific expression profiles following infection with Edwardsiella ictaluri  Immunogenetics  2006 
    NK-lysin of channel catfish: Gene triplication, sequence variation, and expression analysis  Molecular Immunology  2006 
    Genomic organization, gene duplication, and expression analysis of interleukin-1B in channel catfish (Ictalurus punctatus)  Molecular Immunology  2006 
    Channel catfish BAC-end sequences for marker development and assessment of syntenic conservation with other fish species  Animal Genetics  2006 
    CC chemokines in zebrafish: Evidence for extensive intrachromosomal gene duplications  Genomics  2006 
    Analysis of a catfish gene resembling interleukin-8: cDNA cloning,  Developmental and Comparative Immunology  2005 
    Catfish hepcidin gene is expressed in a wide range of tissues  Developmental and Comparative Immunology  2005 
    Characterization and expression analysis of bactericidal  Developmental and Comparative Immunology  2005 
    Constitutive expression of three novel catfish CXC chemokines:  Molecular Immunology  2005 
    Amplified Fragment Length Polymorphism (AFLP)  ( Book Chapt. ) Stock Identification Methods  2005 
    Chemokines in Fish: A Rapidly Expanding Repertoire  Focus on Immunology Research  2005 
    Isolation of SFRS3 gene and its differential expression during metamorphosis involving eye migration of Japanese flounder Paralichthys olivaceus  Biochimica et Biophysica Acta  2005 
    In silico identification and expression analysis of 12 novel CC chemokines in catfish  Immunogenetics  2005 
    DNA marker technologies and their applications  Aquaculture  2004 
    Molecular cloning of proopiomelanocortin cDNA and multi-tissue  General and Comparative Endocrinology  2004 
    Sequence analysis and expression of a CXC chemokine in resistant  Developmental and Comparative Immunology  2004 
    Purification of vitellin from the ovary of Chinese mitten-handed crab (Eriocheir sinensis) and development of an antivitellin ELISA  Comparative Biochemistry and Physiology  2004 
    Multiple CC chemokines in channel catfish and blue catfish as revealed by analysis of expressed sequence tags  Immunogenetics  2004 
    Bioinformatic Mining of Type I Microsatellites from Expressed Sequence Tags of Channel Catfish (Ictalurus punctatus)  Marine Biotechnology  2004 
    Development of Expressed Sequence Tags from Eastern Oyster (Crassostrea virginica): Lessons Learned from Previous Efforts  Marine Biotechnology  2004 
    Alterations in Gene Expression in the Brain of White Catfish (Ameiurus catus) in Response to Cold Acclimation  Marine Biotechnology  2004 
    Identification of mariner elements from house flies ( Musca domestica )and German cockroaches ( Blattella germanica )  Insect Molecular Biology  2004 
    Development of type I markers in channel catfish through intron sequencing  Animal Genetics  2004 
    Assessing genetic diversity of domestic  Aquaculture  2003 
    Dress-out and fillet yields of channel catfish,  Aquaculture  2003 
    A review of catfish genomics: progress and  Comparative and Functional Genomics  2003 
    Translational machinery of channel catfish: II. Complementary DNA and  Gene  2003 
    An AFLP-Based Genetic Linkage Map of Channel Catfish (Ictalurus punctatus)  Genetics  2003 
    Gene Mapping,lsolation and Genetic Improvement in Catfish  ( Book Chapter ) Aquatic Genomics - Steps Toward a Great Future  2003 
    Genomics revolution: great - expectations  50 Years of DNA  2003 
    Putative SNP discovery in interspecific hybrids of catfish by comparative EST analysis  Animal Genetics  2003 
    Molecular characterization and differential expression of the myostatin  Biochimica et Biophysica  2002 
    Translational machinery of channel catfish: I. A transcriptomic approach  Gene  2002 
    Expression Profile of the Channel Catfish Spleen: Analysis of Genes Involved in Immune Functions   Marine Biotechnology  2002 
    Differential gene expression in the brain of channel catfish ( Ictalurus punctatus) in response to cold acclimation   Molecular Genetic Genomics  2002 
    Transcriptome analysis of channel catfish (Ictalurus punctatus): initial analysis of gene expression and microsatellite-containing cDNAs in the skin  Gene  2002 
    Biochemical Genetics of Brook Trout: Management Implications in Georgia  Annual conference of the Southeastern Association of Game and Fish Agencies  2002 
    Microsatellite-Containing Genes from the Channel Catfish  Biochemical and Biophysical Research Communications  2001 
    Multiple isoforms and an unusual cathodic isoform of creatine kinase from  Gene  2001 
    Channel Catfish Follicle-Stimulating Hormone and Luteinizing Hormone: Complementary DNA Cloning and Expression During Ovulation  Marine Biotechnology  2001 
    Effects of Insert Size on Transposition Efficiency of the Sleeping Beauty Transposon in Mouse Cells   Marine Biotechnology  2001 
    Detection ofYersinia ruckeri in rainbow trout blood by use of the polymerase chain reaction  Disease if Aquatic Organisms  2001 
    Transcriptome of channel catfish (lctalurus punctatus): initial analysis of genes and expression profiles of the head kidney  Animal Genetics  2001 
    Genetic Analysis of Ozark Hellbenders Utilizing RAPD Markers  Proceedings of the Annual Conference Southeast Association of Fish and Wildlife Agencies  2001 
    Biochemical Genetics of BrookTrout in Georgia: Management Implications  Proceedings of the Annual Conference Southeastern Association of Fish and Wildlife Agencies  2001 
    Gene Mapping and Marker-assisted Selection in Channel Catfish (Ictalurus Punctatus)  Acta Agriculturae Boreali-occidentalis Sinica  2001 
    Review of the Status of Aquaculture Genetics  Technical Proceedings of the Conference on Aquaculture in the Third Millenium  2001 
    The skeletal muscle a-actin gene of channel catfish (Ictalurus  Gene  2000 
    Transcriptome analysis of channel catŪsh (Ictalurus punctatus): genes and  Gene  2000 
    Comparison of Manual Stripping and Pen Spawning for Production of Channel Catfish 3 Blue Catfish Hybrids and Aquarium Spawning of Channel Catfish  North American Journal of Aquaculture  2000 
    Random amplified polymorphic DNA markers:  Aquaculture  1999 
    Transcribed Dinucleotide Microsatellites and Their  Biochemical and Biophysical Research communications  1999 
    Characterization of nonautonomous Tc1-like transposable elements of  Fish Physiology and Biochemistry  1999 
    High levels of conservation at microsatellite loci among Ictalurid catfishes  Journal of Heredity  1999 
    Development of Polymorphic EST Markers Suitable for Genetic Linkage Mapping of Catfish  Marine Biotechnology  1999 
    Development of Amplified Fragment Length Polymorphism (AFLP) Markers Suitable for Genetic Linkage Mapping of Catfish   Transactions of the American Fisheries Society  1999 
    Effects of Seasonal Variations, Thyroid and Steroid Hormones, and Carp Pituitary Extract on the Artificial Production of Channel Catfish Zctalurus punctatus X Blue Catfish I. furcatus Hybrids  Journal of the World Aquaculture Society  1999 
    Polymorphic microsatellite markers in Ictalurus punctatus and related catfish species  Molecular Ecology  1999 
    Inheritance and usefulness of AFLP markers in channel catŪsh (Ictalurus punctatus), blue catŪsh ( I. furcatus), and their F1, F2, and backcross hybrids  Molecular and General Genetics  1998 
    Characterization of an A/T-rich family of sequences from channel catfish (Ictalurus punctatus)   Molecular Marine Biology and Biotechnology  1998 
    The Effect of the Absence or Presence of Channel Catfish Males on Induced Ovulation of Channel Catfish Females for Artificial Fertilization with Blue Catfish Sperm  Progressive Fish Culturist  1998 
    Inheritance of RAPD markers in channel catfish (Ictalurus punctatus), blue catfish (I. furcatus), and their F1, F2 and backcross hybrids  Animal Genetics  1998 
    Transcriptional activities in the pituitaries of channel catfish before and after induced ovulation by injection of carp pituitary extract as revealed by expressed sequence tag analysis  Journal of Molecular Endocrinology  1998 
    Genetic linkage and QTL mapping of ictalurid catfish  Circular  1998 
    REVIEW OF PROGRESS IN CATFISH GENE MAPPING  Proceedings of the Aquaculture Species Genome Mapping Workshop  1997 
    Hetero-stagger cloning: efficient and rapid cloning of PCR products   Nucleic Acids Research  1996 
    The E5 gene product of rhesus papillomavirus is an activator of endogenous Ras and phosphatidylinositol-3'-kinase in NIH 3T3 cells  Proceedings of the National Academy of Science-Biochemistry  1996 
    The expression levels of the human papillomavirus type 16 E7 correlate with its transforming potential  Virology  1995 
    Incompatibility conditioned by the Mla gene in powdery mildew of barley" timing of the effect of cordycepin on hypersensitive cell death  Physiology and Molecular Plant Pathology  1994 
    The E6 gene of human papillomavirus type 16 is sufficient for transformation of baby rat kidney cells in cotransfection with activated Ha-ras  Virology  1994 
    Folic Acid and Pteroic Acid Related to Anemia of Cultured Channel Catfish, Ictalurus punctatus  Journal of Applied Aquaculture  1993 
    Molecular Cloning and Analysis of Abundant and Stage-Specific mRNAs from Puccinia graminis  Molecular Plant-Microbe Interactions  1993 
    The products of the E5, E6, or E7 open reading frames of RhPV 1 Can individually transform NIH 3T3 cells or in cotransfections with activated Ras Can transform primary rodent epithelial cells  Virology  1993 
    Folate-Degrading Bacteria in Channel Catfish Feeds  Journal of Applied Aquaculture  1991 
    Development of Expression Vectors for Transgenic Fish  Biotechnology  1990 
    Functional Analysis of Elements Affecting Expression of the B-Actin Gene of Carp  Molecular and Cellular Biology  1990 
    Effect of megalevels of dietary vitamin C on the immune response of channel catfish Ictalurus punctatus in ponds  Diseases of Aquatic Organisms  1989 

    102 Records Total